Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0302
(728 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ493452-1|ABF48588.1| 305|Tribolium castaneum hedgehog protein. 23 2.5
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 23 2.5
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 23 2.5
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 23 2.5
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 23 2.5
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 23 2.5
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 23 2.5
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 23 2.5
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 23 2.5
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 23 3.3
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 22 4.4
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 22 4.4
>DQ493452-1|ABF48588.1| 305|Tribolium castaneum hedgehog protein.
Length = 305
Score = 23.0 bits (47), Expect = 2.5
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +1
Query: 283 TAAHCWRTRRAQARQFTLALGTANIFSGGTRVTTSNVQMHGSYNMDTLH 429
T A T+R + + TLA+ N + G + T G + ++LH
Sbjct: 4 TGADRLMTQRCKEKLNTLAISVMNQWPGVRLLVTEGWDEEGYHTPESLH 52
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.5
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 66 SPSNSTTTSRSVSPGPRVLDAPRKPLTST 152
S SN+T +S SP P KP TST
Sbjct: 133 SNSNATKSSGLTSPLSVSTSPPGKPATST 161
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.5
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 66 SPSNSTTTSRSVSPGPRVLDAPRKPLTST 152
S SN+T +S SP P KP TST
Sbjct: 133 SNSNATKSSGLTSPLSVSTSPPGKPATST 161
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 23.0 bits (47), Expect = 2.5
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 66 SPSNSTTTSRSVSPGPRVLDAPRKPLTST 152
S SN+T +S SP P KP TST
Sbjct: 133 SNSNATKSSGLTSPLSVSTSPPGKPATST 161
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.5
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 66 SPSNSTTTSRSVSPGPRVLDAPRKPLTST 152
S SN+T +S SP P KP TST
Sbjct: 133 SNSNATKSSGLTSPLSVSTSPPGKPATST 161
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 23.0 bits (47), Expect = 2.5
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 66 SPSNSTTTSRSVSPGPRVLDAPRKPLTST 152
S SN+T +S SP P KP TST
Sbjct: 133 SNSNATKSSGLTSPLSVSTSPPGKPATST 161
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 23.0 bits (47), Expect = 2.5
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 66 SPSNSTTTSRSVSPGPRVLDAPRKPLTST 152
S SN+T +S SP P KP TST
Sbjct: 89 SNSNATKSSGLTSPLSVSTSPPGKPATST 117
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.5
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 66 SPSNSTTTSRSVSPGPRVLDAPRKPLTST 152
S SN+T +S SP P KP TST
Sbjct: 133 SNSNATKSSGLTSPLSVSTSPPGKPATST 161
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.5
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 66 SPSNSTTTSRSVSPGPRVLDAPRKPLTST 152
S SN+T +S SP P KP TST
Sbjct: 133 SNSNATKSSGLTSPLSVSTSPPGKPATST 161
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 22.6 bits (46), Expect = 3.3
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Frame = +2
Query: 326 SSPSLLAQLTSSPEAP--GSPPPMSR 397
SSP L +++ SP P SPPP R
Sbjct: 83 SSPILAEKVSVSPTTPPTPSPPPEER 108
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 22.2 bits (45), Expect = 4.4
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -1
Query: 218 SQVQQDGGEHQRLRQNHPQSWYRRSQRL 135
S V D G + + H W+RR RL
Sbjct: 2 SGVVGDAGRASKGQDKHMVHWFRRGLRL 29
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 22.2 bits (45), Expect = 4.4
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 511 TLLVLGPGLPASEGPPMLLREP 576
TLLVLG P+ +REP
Sbjct: 8 TLLVLGASAEDDTSGPVFVREP 29
Score = 22.2 bits (45), Expect = 4.4
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +2
Query: 326 SSPSLLAQLTSSPEAPGSPPPMSR 397
S PS + ++ E PG PP R
Sbjct: 980 SEPSETVTIITAEEVPGGPPTSIR 1003
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,081
Number of Sequences: 336
Number of extensions: 3115
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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