Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0302
(728 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 41 0.001
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 38 0.008
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.31
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 32 0.41
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.41
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.41
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 32 0.55
SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30) 32 0.55
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.72
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 31 0.72
SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16) 31 0.96
SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 30 1.7
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_13377| Best HMM Match : Extensin_2 (HMM E-Value=0.00046) 29 2.9
SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23) 29 2.9
SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_18510| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_44751| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 29 5.1
SB_7929| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 29 5.1
SB_36834| Best HMM Match : Rap_GAP (HMM E-Value=0.00045) 28 6.7
SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19) 28 8.9
SB_38755| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_10891| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 40.7 bits (91), Expect = 0.001
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Frame = +1
Query: 199 PSCWTCDRTDEWQNFHL-RSSLLTNTRSVTAAHCWRTRRAQARQFTLALGTANIFSGGTR 375
P W + ++ H+ +SLLT ++TAAHC T A +TL G + G
Sbjct: 249 PHSWPWQLSFRYKGSHICGASLLTPGWALTAAHCL-TLSDDASDYTLVAGAHQRENDGQV 307
Query: 376 VTTSNVQMHGSYNMDTLHNDVAIIN-HNHVGFTNNIQRINLAS 501
S ++ H ++M + NDVA++ +V ++ + I L S
Sbjct: 308 FGISKIRKHKGFSMVHVRNDVALLKLSTYVQLSDKVGTICLPS 350
Score = 33.9 bits (74), Expect = 0.14
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = +3
Query: 552 TSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRSTCSGDSGG 722
+SD + A+ Q+ +V L + C T G V S +C G+ G S C+GDSGG
Sbjct: 422 SSDQHTLADKLQQSKVPL--VNYTTCRSTNGATVDENSMICAGGA-GSSACNGDSGG 475
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 38.3 bits (85), Expect = 0.006
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = +1
Query: 238 NFHLRSSLLTNTRSVTAAHCWRTRRAQARQFTLALGTANIFSGGTRVTTSNVQ---MHGS 408
NF SL+++T VTAAHC R + Q+ + +G N T NV+ H
Sbjct: 499 NFICGGSLVSSTWVVTAAHC-VARSSNPAQYQIIVGEHNRNVNEVTEETLNVKKVIAHPQ 557
Query: 409 YNMDTLHNDVAII 447
YN L ND+A+I
Sbjct: 558 YNNPRLSNDIALI 570
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 37.9 bits (84), Expect = 0.008
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 591 RQVSLQVITNAVCARTFGNNVIIASTLCV-DGSNGRSTCSGDSGG 722
R + ++ N VC R+ +N T C DG G TC GDSGG
Sbjct: 249 RHSAFEIQPNDVCDRSTRHNFNATVTFCAGDGKGGNDTCHGDSGG 293
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 32.7 bits (71), Expect = 0.31
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +3
Query: 591 RQVSLQVITNAVCARTFGNNVIIASTLCV--DGSNGRSTCSGDSGG 722
+Q + +++ C R +G + S +CV + N S+C GDSGG
Sbjct: 465 QQAKVPIVSKEDCKRAYGAIIRPYSHICVGFNTENAASSCQGDSGG 510
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 32.3 bits (70), Expect = 0.41
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +3
Query: 549 RTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIAS-TLCVDGSNGRSTCSGDSGG 722
RT S A Q Q L V ++ C RT G V + S ++ G G+ C GDSGG
Sbjct: 162 RTVGGGSAAGILQ--QAMLPVAGDSDCQRTNGRLVPVDSRSMICAGGQGKGGCQGDSGG 218
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 32.3 bits (70), Expect = 0.41
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +3
Query: 564 ASGANNQQK-RQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTCSGDSGG 722
ASG N K Q S+ +++ + C + N I S LC + G C GDSGG
Sbjct: 85 ASGGNQPNKLMQASVPLVSQSKCNTAYPNK-IHDSMLCAGLDAGGIDACQGDSGG 138
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 32.3 bits (70), Expect = 0.41
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +3
Query: 591 RQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRSTCSGDSGG 722
+Q V+ + CA +T+ G +G S CSGDSGG
Sbjct: 457 QQARTPVVDHETCAIKLDKFAADKTTMICAGGSGSSACSGDSGG 500
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 32.3 bits (70), Expect = 0.41
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +3
Query: 564 ASGANNQQK-RQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTCSGDSGG 722
ASG N K Q S+ +++ + C + N I S LC + G C GDSGG
Sbjct: 429 ASGGNQPNKLMQASVPLVSQSKCNTAYPNK-IHDSMLCAGLDAGGIDACQGDSGG 482
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 31.9 bits (69), Expect = 0.55
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +3
Query: 591 RQVSLQVITNAVCARTFGNNVII--ASTLCVDGSNGRSTCSGDSGG 722
++ L V +NA C + G + + AS +C G GR C GDSGG
Sbjct: 548 QEAELVVASNAKCDKKNGELLPVDDASMVCAGGP-GRGGCQGDSGG 592
>SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30)
Length = 249
Score = 31.9 bits (69), Expect = 0.55
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +3
Query: 591 RQVSLQVITNAVCARTFGNNVII--ASTLCVDGSNGRSTCSGDSGG 722
++ L V +NA C + G + + AS +C G GR C GDSGG
Sbjct: 88 QEAELVVASNAKCDKKNGELLPVDDASMVCAGGP-GRGGCQGDSGG 132
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 31.5 bits (68), Expect = 0.72
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +3
Query: 561 AASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTCSGDSGG 722
A+ G +Q S+ V++ A C + + I S LC G TC GDSGG
Sbjct: 834 ASGGTAPDILQQASVPVVSRARCEKAYPGK-IHDSMLCAGLDQGGIDTCQGDSGG 887
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 31.5 bits (68), Expect = 0.72
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +1
Query: 256 SLLTNTRSVTAAHCWRTRRAQARQFTLALGTANIFSGGTR----VTTSNVQMHGSYNMDT 423
SL+ + +TAAHC ++R + + LG + T + S + H +YN T
Sbjct: 420 SLIHSNWVLTAAHCISSKRPA--EVVVRLGAHSRLGSLTTDMQDIKVSAIITHSNYNSRT 477
Query: 424 LHNDVAII 447
++ND+A++
Sbjct: 478 MYNDIALL 485
>SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16)
Length = 91
Score = 31.1 bits (67), Expect = 0.96
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 561 AASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTCSGDSGG 722
A G++ QV + +++ + C+R + + S +C S G +C GDSGG
Sbjct: 6 AEGGSSPTVLMQVEVPIVSASTCSRAYSR--LHESMVCAGRASGGIDSCQGDSGG 58
>SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 591 RQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRSTCSGDSGG 722
RQ + ++ + C R + T+ G G S C+GDSGG
Sbjct: 83 RQSLVPLVDHVTCKRGLKEFYLDEETMMCVGGAGSSACNGDSGG 126
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +3
Query: 591 RQVSLQVITNAVCARTFGNNVIIASTLCVDGS--NGRSTCSGDSGG 722
+Q + + ++ C R +G+ + + LC + N C GDSGG
Sbjct: 88 QQARIPIASHEDCKRKYGSGIYSYTHLCAGEAKPNAAGACQGDSGG 133
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +3
Query: 561 AASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGR-STCSGDSGG 722
++ G+ + Q + + T + C R++ I A +C G TC GDSGG
Sbjct: 765 SSGGSQPEALNQAVVPLRTRSECERSYPGK-ISADMICAGNPEGGVDTCQGDSGG 818
>SB_13377| Best HMM Match : Extensin_2 (HMM E-Value=0.00046)
Length = 797
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +3
Query: 87 TSRSVSPGPRVLDAPRKPL 143
TS P PRVLD+PRKPL
Sbjct: 379 TSLLAYPTPRVLDSPRKPL 397
>SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23)
Length = 136
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 561 AASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTCSGDSGG 722
++ G+ +QVS+ + + A C ++ N I S +C G C GDSGG
Sbjct: 35 SSGGSTPDYLQQVSVPIRSRARCDSSYPNK-IHDSMICAGIDKGGIDACQGDSGG 88
>SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +3
Query: 591 RQVSLQVITNAVCARTFGNNVIIASTLCV-DGSNGRSTCSGDSGG 722
R + V + +C + + T C +G G TC GDSGG
Sbjct: 191 RHTAFTVQPDRICRGSTSYHFNATITFCAGEGKGGNDTCRGDSGG 235
>SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +3
Query: 552 TSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRSTCSGDSGG 722
+SD AN Q+ +VS+ V+ S +C G+ G S C GDSGG
Sbjct: 95 SSDMQLLANKLQQSRVSIIENNKCKVKNDCHYKVLDKSMVCAGGA-GSSICHGDSGG 150
>SB_18510| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +1
Query: 367 GTRVTTSNVQMHGSYNMDTLHNDVAIINHNHVGFTNNIQRINLASGSTTLLVLGP 531
G ++ +N HG + +++++ ++ + +V FT + INL T LV P
Sbjct: 375 GKKIIPNNQSKHGHRKLKRINSNMNLVKYENVSFTMLLIIINLFMCYTVYLVFLP 429
>SB_44751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 842
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -2
Query: 70 GLFCHDHGRQRHQYCCEDLHDYY 2
G FCH H R CC+DL Y
Sbjct: 601 GSFCHIHPTDRFAVCCKDLLSSY 623
>SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1417
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 69 PSNSTTTSRSVSPGPRVLDAPRKPLTSTVPGL 164
PS STT++ + P P P KP ST PG+
Sbjct: 1335 PSPSTTSTTPIKPSPST--TPIKPSPSTTPGV 1364
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 564 ASGANNQQKRQVSLQVITNAVCARTFGNNVI-IASTLCVDGSNGRSTCSGDSGG 722
+ GA+ + +Q ++++ A C + ++ST+ G TC GDSGG
Sbjct: 352 SGGASPEILQQAKTKLLSYAECTKNGSYEAAAVSSTMLCAQVPGIDTCQGDSGG 405
>SB_7929| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 54 SWQKSPSNSTTTSRSVSPG-PRVLDAPRKPLTSTVP 158
S+ K SNS T S S SPG P VL+ P +S P
Sbjct: 14 SYPKRNSNSHTASNSCSPGDPLVLERPPPRWSSNSP 49
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +3
Query: 549 RTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNG--RSTCSGDSGG 722
R +++ G+N Q + S+ ++ C + N I + + G G + TC GDSGG
Sbjct: 1919 RIGESSPGSNVLQ--EASIPLVDQRACEEQYRNLKPITARMRCAGIYGTPKGTCKGDSGG 1976
>SB_36834| Best HMM Match : Rap_GAP (HMM E-Value=0.00045)
Length = 545
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +3
Query: 57 WQKSPSN-STTTSRSVSPGPRVLDAPRKPLTSTVPGLWVVLPQTL 188
+ K PS SR SP P L P PL + + ++ QTL
Sbjct: 414 YHKQPSTFEEFASRVFSPAPNTLSRPSTPLGTAAEAMTIMRTQTL 458
>SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19)
Length = 811
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = +1
Query: 205 CWTCDRTDEWQNFHLRSSLLTNTRSVTAAHCWRTRRAQARQFTLALGTANIFSG 366
C C R + H R LT T+ + HC ++RRA T + A + G
Sbjct: 664 CPVCIRNKVPEPGHYRCDWLTGTK--LSRHCSKSRRAHKADVTFLVPPAEAYEG 715
>SB_38755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 471
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +1
Query: 394 QMHGSYNMDTLHNDVAIINHNHVGFTNNIQRINLASGSTTLLVL 525
Q H N+ ++N+ IIN+N++ NNI N+ + ++++
Sbjct: 384 QQHHHQNI-IINNNNIIINNNNIIINNNINNNNIIINNNNIIII 426
>SB_10891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 929
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = +2
Query: 545 RKDLRC---CFGSQQPTKTPSEPPGHYQRRLRPHVWKQCDHC 661
R++ +C C+G + +P PP RL W+ CD C
Sbjct: 279 RRNHKCNNLCYGCGEQECSPLVPPAEQDHRLE---WQYCDEC 317
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,252,026
Number of Sequences: 59808
Number of extensions: 427172
Number of successful extensions: 1955
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1951
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1949964354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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