Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0302
(728 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 25 0.73
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 25 0.97
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 24 1.7
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 2.9
DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II lar... 23 3.9
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 23 3.9
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 22 6.8
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 22 6.8
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 6.8
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 9.0
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 9.0
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 25.0 bits (52), Expect = 0.73
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -1
Query: 233 HSSVRSQVQQDGGEHQRLRQNHPQSWYRRSQR 138
HSS ++Q QQ + Q+ +Q PQ ++ Q+
Sbjct: 1495 HSSQKTQQQQPQQQQQQQQQQQPQQQSQQPQQ 1526
Score = 21.8 bits (44), Expect = 6.8
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 3/27 (11%)
Frame = -3
Query: 375 PGAS---GEDVSCAKSEGELTSLGSPG 304
PG S GE S A ++G T+ SPG
Sbjct: 893 PGCSSKNGEPTSAAFAQGFATAASSPG 919
Score = 21.4 bits (43), Expect = 9.0
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 601 ASRSLPTPSAPARLETM*SLPPPS 672
AS P P P R+ T+ P PS
Sbjct: 1359 ASGGRPVPERPERVPTVDLSPSPS 1382
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 24.6 bits (51), Expect = 0.97
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +1
Query: 205 CWTCDRTDEWQNFH 246
CW CD+ +E++ H
Sbjct: 467 CWVCDQCEEYEYVH 480
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 23.8 bits (49), Expect = 1.7
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 465 LHQQHPAHQPSQWKH 509
+H QHP QP Q +H
Sbjct: 172 MHTQHPHMQPQQGQH 186
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 23.0 bits (47), Expect = 2.9
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +3
Query: 60 QKSPSNSTTTSRSVSPGPRVLDAPRKPLTSTVPGLWVVLPQTLVLT 197
Q+S S+ S + PR L A TST P TLVL+
Sbjct: 810 QQSSSDYLMVGNSPASSPRYLSAAATSSTSTSPRPASSTAATLVLS 855
>DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II large
subunit protein.
Length = 296
Score = 22.6 bits (46), Expect = 3.9
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -2
Query: 184 VCGRTTHNPGTVEVSGFLGASKTLGPGDTDLD 89
VCGR N TV + L ++G GDT D
Sbjct: 125 VCGRFYGNIQTVXNNWLLLEGHSIGIGDTIAD 156
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 22.6 bits (46), Expect = 3.9
Identities = 5/11 (45%), Positives = 9/11 (81%)
Frame = +1
Query: 205 CWTCDRTDEWQ 237
CW CD+ +E++
Sbjct: 557 CWVCDQCEEYE 567
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 21.8 bits (44), Expect = 6.8
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +1
Query: 295 CWRTRRAQARQFTLALGTANI 357
CW TR+ Q +GT+N+
Sbjct: 459 CWDTRKEYIPQNLGVIGTSNL 479
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 21.8 bits (44), Expect = 6.8
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -2
Query: 154 TVEVSGFLGASKTLGPGDTDLDVVV 80
T +V G +GA +G D D D ++
Sbjct: 108 TGDVHGVIGAGHWIGDHDVDKDELI 132
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.8 bits (44), Expect = 6.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 571 EPTTNKNAK*ASRS 612
EP TNKN K SRS
Sbjct: 239 EPGTNKNGKFFSRS 252
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +1
Query: 406 SYNMDTLHNDVAIINHNHVGFTNN 477
S + +T+HN+ N+N+ + NN
Sbjct: 83 SLSNNTIHNNNYKYNYNNNNYNNN 106
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +1
Query: 406 SYNMDTLHNDVAIINHNHVGFTNN 477
S + +T+HN+ N+N+ + NN
Sbjct: 83 SLSNNTIHNNNYKYNYNNNNYNNN 106
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,930
Number of Sequences: 438
Number of extensions: 3738
Number of successful extensions: 26
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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