Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0301
(724 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 43 3e-04
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08) 38 0.011
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.077
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 34 0.10
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.18
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.31
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23) 32 0.41
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 32 0.54
SB_32032| Best HMM Match : PAN (HMM E-Value=0.029) 31 0.72
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 31 0.72
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.72
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.95
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 31 1.2
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 30 1.7
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 30 2.2
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 30 2.2
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 29 3.8
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 29 3.8
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 29 3.8
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 29 5.0
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 28 6.7
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 28 8.8
SB_10891| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/65 (38%), Positives = 34/65 (52%)
Frame = +1
Query: 58 ICGASLLTNTRSVTAAHCWRTRRAQARQFTLALGTANIFSGGTRVTTSNVQMHGSYNMDT 237
ICGASLLT ++TAAHC T A +TL G + G S ++ H ++M
Sbjct: 265 ICGASLLTPGWALTAAHC-LTLSDDASDYTLVAGAHQRENDGQVFGISKIRKHKGFSMVH 323
Query: 238 LHNDV 252
+ NDV
Sbjct: 324 VRNDV 328
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 41.9 bits (94), Expect = 5e-04
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +1
Query: 31 IALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFTLALGTANIFSGGTRVTTSNVQ 210
IAL + ICG SL+++T VTAAHC R + Q+ + +G N T NV+
Sbjct: 492 IALKSRGNFICGGSLVSSTWVVTAAHC-VARSSNPAQYQIIVGEHNRNVNEVTEETLNVK 550
Query: 211 ---MHGSYNMDTLHNDV 252
H YN L ND+
Sbjct: 551 KVIAHPQYNNPRLSNDI 567
>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
Length = 235
Score = 37.5 bits (83), Expect = 0.011
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +1
Query: 61 CGASLLTNTRSVTAAHCWRTRRAQARQFTLALGT-ANIFSGGTRV-TTSNVQMHGSYNMD 234
CGASLL+ ++TAAHC + R + +TLA G + +V S V H ++M
Sbjct: 111 CGASLLSPGWALTAAHCVQ-RSSNPADYTLAAGAHRRVNDAHAQVLRVSQVISHKEFSMG 169
Query: 235 TLHNDV 252
L NDV
Sbjct: 170 HLRNDV 175
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 34.7 bits (76), Expect = 0.077
Identities = 23/64 (35%), Positives = 29/64 (45%)
Frame = +1
Query: 34 ALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFTLALGTANIFSGGTRVTTSNVQM 213
A NG ICG SLL++T +TAAHC R +T+ +G GT S
Sbjct: 332 ATLNGH-HICGGSLLSSTWVLTAAHC-VIRSHNTSDYTVIVGAHKRVLDGTEHKLSAFYK 389
Query: 214 HGSY 225
H Y
Sbjct: 390 HEKY 393
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +2
Query: 506 SSTCSGDSGGPL 541
SS CSGDSGGPL
Sbjct: 491 SSACSGDSGGPL 502
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 34.3 bits (75), Expect = 0.10
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = +1
Query: 61 CGASLLTNTRSVTAAHCWRTRRAQARQFTLALGTANIFSGGTR----VTTSNVQMHGSYN 228
CG SL+ + +TAAHC ++R + + LG + T + S + H +YN
Sbjct: 417 CGGSLIHSNWVLTAAHCISSKR--PAEVVVRLGAHSRLGSLTTDMQDIKVSAIITHSNYN 474
Query: 229 MDTLHNDV 252
T++ND+
Sbjct: 475 SRTMYNDI 482
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 33.5 bits (73), Expect = 0.18
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +1
Query: 43 NGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFTLALGTANIFSGGTRVTTS----NVQ 210
NGR ICG SL+ VTAAHC R +T+ +G A+ +G T V + +
Sbjct: 52 NGR-HICGGSLIAKDWVVTAAHC-VDRNPTPSGYTVVVG-AHHRTGNTPVQNTFRLKQLF 108
Query: 211 MHGSYNMDTLHNDV 252
H ++M L ND+
Sbjct: 109 KHEQFSMRHLKNDI 122
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 33.5 bits (73), Expect = 0.18
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +1
Query: 31 IALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFTLALGT-ANIFSGGTRVT--TS 201
IAL + ICG SL++ T VTAAHC + + + G GT T
Sbjct: 83 IALERSGSFICGGSLVSPTWVVTAAHC-IAGSSHTPSYKVVTGEHIRNSPEGTEQTHDVK 141
Query: 202 NVQMHGSYNMDTLHNDV 252
+ H +YN L ND+
Sbjct: 142 RIITHPTYNSPQLSNDI 158
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 32.7 bits (71), Expect = 0.31
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Frame = +1
Query: 10 PHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQ-ARQFTLALGTAN---IFS 177
P A L+ G CG +L+ VTA+HC R + + ++LG N I S
Sbjct: 223 PWQAMLMFQTPLGYKQFCGGALVHEDWVVTASHCINDIRPEDYKTHIISLGGHNKTGIMS 282
Query: 178 GGTRVTTSNVQMHGSYNM--DTLHNDV 252
R+ + + +H YN+ +NDV
Sbjct: 283 VEQRIGIAKIYLHADYNLYPHQYNNDV 309
>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
Length = 299
Score = 32.3 bits (70), Expect = 0.41
Identities = 21/72 (29%), Positives = 31/72 (43%)
Frame = +1
Query: 10 PHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFTLALGTANIFSGGTR 189
PH +++ + ICG SLL+ +TAAHC R + +T+ +G GT
Sbjct: 39 PHSWPWQVSIRLKGSHICGGSLLSPLWLLTAAHC-VIRSNNSADYTVIVGAHKRVLDGTE 97
Query: 190 VTTSNVQMHGSY 225
S H Y
Sbjct: 98 HKLSTFYKHEKY 109
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 32.3 bits (70), Expect = 0.41
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Frame = +1
Query: 7 EPHLAGLVIALTNGRTSI--CGASLLTNTRSVTAAHCWRTRRAQARQFTLALGTANIFSG 180
+PH I+L GR+ CG SL+++ VTAAHC R +T+ +G A+ G
Sbjct: 113 QPHSWPWQISL-RGRSGFHTCGGSLISDRWVVTAAHCIH-RNKNPGGYTVVVG-AHKKRG 169
Query: 181 GTRV----TTSNVQMHGSYNMDTLHNDV 252
T V S + H YN + ND+
Sbjct: 170 STSVQQSLRLSQIIEHPKYNDRRIVNDI 197
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 31.9 bits (69), Expect = 0.54
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 58 ICGASLLTNTRSVTAAHCWRTRRAQARQFTL-ALGTANIFSG 180
ICG S++ + VTAAHC T+ A ++T+ A N+ G
Sbjct: 1808 ICGGSIVNSQWIVTAAHCVTTKPPGASRYTMYAFSDLNVTLG 1849
>SB_32032| Best HMM Match : PAN (HMM E-Value=0.029)
Length = 610
Score = 31.5 bits (68), Expect = 0.72
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 269 PCWLHQQHPAHQPSQWKQQLCWYLGLGCXLRK 364
P W+++ HP H+ ++LC+ +G C R+
Sbjct: 455 PGWMNESHPRHEDGIVSRRLCYRVGGDCCARR 486
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 31.5 bits (68), Expect = 0.72
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = +1
Query: 61 CGASLLTNTRSVTAAHCWRTRRAQARQFTLALGTANIFSGGT----RVTTSNVQMHGSYN 228
CG SL+ + +TAAHC R R++++ +G A+ G T +++ S + H Y+
Sbjct: 68 CGGSLIDSEWVLTAAHCVAGIR-NPRRYSVYVG-AHELDGTTQVEEKISISKIYSHEKYS 125
Query: 229 MDTLHNDV 252
L +DV
Sbjct: 126 SSLLTSDV 133
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 31.5 bits (68), Expect = 0.72
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +1
Query: 58 ICGASLLTNTRSVTAAHCWRTRRAQARQFTLALGTANIFS-GGTR--VTTSNVQMHGSYN 228
ICG ++++ +TAAHC + RA L +G +F+ GT + + H +Y+
Sbjct: 573 ICGGNVISPWWVLTAAHCVQDERAS--NIKLTMGEWRLFNVDGTEQVIPVERIISHANYS 630
Query: 229 MDTLHND 249
+T+ D
Sbjct: 631 YNTVDYD 637
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 31.1 bits (67), Expect = 0.95
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +1
Query: 10 PHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFTLALGTANI 171
P +++ N T CG SL+ +T++HC+ T + QF + LG ++
Sbjct: 258 PWQVEIILKTPNLTTHYCGGSLIDPYWILTSSHCFWTYNNISTQFEIRLGEHDV 311
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1
Query: 58 ICGASLLTNTRSVTAAHCWRTRRAQARQFTLALG 159
ICG S++ VTAAHC+ + A+ +T+A+G
Sbjct: 134 ICGGSVVAPEWIVTAAHCFAYSK-DAKDYTIAVG 166
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 25 LVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFTLALG 159
+++ N T CG SL+ +T++HC+ T + QF + LG
Sbjct: 3 IILKTPNLTTHYCGGSLIDPYWILTSSHCFWTYNNISTQFEIRLG 47
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +1
Query: 58 ICGASLLTNTRSVTAAHCWRTRRAQARQFTLALGTANIF 174
+CG +LLT+ +TAA C+R + +A ++ + LG + +
Sbjct: 283 VCGGTLLTSEWVLTAARCFRDNK-RAGEWKVILGETDFY 320
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +1
Query: 40 TNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFTLALGTANIFSGG 183
TNG+ ICG SL+T +TAAHC +T+ +G GG
Sbjct: 57 TNGQ-HICGGSLITPEWVLTAAHC-VDHYPYPGAYTVVVGWGRTVGGG 102
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/79 (21%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +1
Query: 25 LVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFTLALGTANI---FSGGTRVT 195
+ + L+ CG +L+ +TAAHC+ R + ++T+ +G +++ G ++
Sbjct: 1254 VALTLSGNPVQRCGGALIAADWVLTAAHCF-DRFSMPPEWTVQVGVSDMRRRDGKGQSLS 1312
Query: 196 TSNVQMHGSYNMDTLHNDV 252
+ +H YN + +D+
Sbjct: 1313 IKAIFVHPQYNSSSHEHDL 1331
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 7 EPHLAGLVIALTNGRT-SICGASLLTNTRSVTAAHC 111
+PH I+L GR +CG +L+++ VTA+HC
Sbjct: 853 QPHSWPWQISLRQGRRFHLCGGALISDRWVVTASHC 888
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +1
Query: 10 PHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 111
P AGL L + T +CG SL+ VTAAHC
Sbjct: 445 PWQAGLKKGLDD--TIVCGGSLINREWVVTAAHC 476
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +1
Query: 43 NGRTSICGASLLTNTRSVTAAHC 111
NGR ICG SL+T +TAAHC
Sbjct: 101 NGR-HICGGSLITPEWVLTAAHC 122
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 31 IALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQ-ARQFTLALGTANI 171
IAL R CG +L+ VT AHC+ ++ R + + LG N+
Sbjct: 44 IALLFKRQQYCGGALVHERWVVTGAHCFNPYTSEDPRDWNVTLGEYNL 91
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 28 VIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQAR 138
++A+ CG SL+ VTAAHC+ + R + R
Sbjct: 55 MVAMMLDSAQACGGSLVPEDWIVTAAHCFDSNRLRWR 91
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 31 IALTNGRTSICGASLLTNTRSVTAAHCW 114
+AL T CG SL+ VTA HC+
Sbjct: 69 VALLMNGTQFCGGSLVNENWVVTARHCF 96
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 27.9 bits (59), Expect = 8.8
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +1
Query: 31 IALTNGRTSICGASLLTNTRSVTAAHC 111
++++ G+ CG +L+++ +TAAHC
Sbjct: 492 VSVSMGKLHSCGGALISSKWVITAAHC 518
>SB_10891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 929
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = +2
Query: 359 RKDLRC---CFGSQQPTKTPSEPPGHYQRRLRPHVWKQCDHC 475
R++ +C C+G + +P PP RL W+ CD C
Sbjct: 279 RRNHKCNNLCYGCGEQECSPLVPPAEQDHRLE---WQYCDEC 317
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,765,962
Number of Sequences: 59808
Number of extensions: 385306
Number of successful extensions: 1573
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1569
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1925890720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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