Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0301
         (724 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    38   0.010
Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical pr...    31   0.83 
U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    31   1.1  
Z35719-1|CAA84800.1|  296|Caenorhabditis elegans Hypothetical pr...    29   2.5  
U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    29   2.5  
U50197-2|AAA91255.2|  624|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z95621-2|CAB09131.1|  330|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z78019-9|CAB01457.1|  330|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 37.5 bits (83), Expect = 0.010
 Identities = 24/79 (30%), Positives = 36/79 (45%)
 Frame = +1

Query: 16  LAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFTLALGTANIFSGGTRVT 195
           +A LV    NG+  +CGA+++ +   VTAAHC    + Q R F       N  +     +
Sbjct: 51  MAKLVSYGDNGQGILCGATVIDDFWLVTAAHC--ALQLQTRSFVYVREPKN--NRERSFS 106

Query: 196 TSNVQMHGSYNMDTLHNDV 252
                +H  YN  T  ND+
Sbjct: 107 VKEAYIHSGYNNQTADNDI 125


>Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical
           protein F15B9.5 protein.
          Length = 297

 Score = 31.1 bits (67), Expect = 0.83
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +1

Query: 16  LAGLVIALTNGRTSICGASLLTNTRSVTAAHC 111
           LA ++    +G T++CG  L+  +  +T+AHC
Sbjct: 31  LASVITRFPDGTTNVCGGVLIAPSIVITSAHC 62


>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = +1

Query: 34  ALTNGRTSI--CGASLLTNTRSVTAAHCW 114
           AL N  T    CGAS+L  T  +TAAHC+
Sbjct: 43  ALRNKATKAHHCGASILDKTHLITAAHCF 71


>Z35719-1|CAA84800.1|  296|Caenorhabditis elegans Hypothetical
           protein F17C8.2 protein.
          Length = 296

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = -2

Query: 195 GDPGASGEDVSCAKSEGELTSLGSPGPP 112
           G+PGA G+D    K +GE    G PGPP
Sbjct: 201 GEPGAPGKDGE--KGKGEPGPAGPPGPP 226


>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 18/57 (31%), Positives = 29/57 (50%)
 Frame = +1

Query: 61  CGASLLTNTRSVTAAHCWRTRRAQARQFTLALGTANIFSGGTRVTTSNVQMHGSYNM 231
           CG SL+     +TAAHC+   R +   +++ +G     SG     T+ V +H  YN+
Sbjct: 84  CGGSLIDPNFVLTAAHCFAKDR-RPTSYSVRVGGHRSGSGSPHRVTA-VSIHPWYNI 138


>U50197-2|AAA91255.2|  624|Caenorhabditis elegans Hypothetical
           protein F25E2.2 protein.
          Length = 624

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
 Frame = +2

Query: 275 WLHQQHPAHQPSQWKQQLCWYLGLGCXLRKDLRCCFGSQQP-TKTPSEPPGHYQRRL-RP 448
           +L +Q PAHQ  Q K+Q C      C      +C   ++ P      E    + R++ R 
Sbjct: 530 FLEEQEPAHQKEQNKEQDCPINSKSCEKCSHSKCEKCAKHPHHHCKCEDQKEFNRKIVRA 589

Query: 449 HVWKQCDHC--LHP 484
              K CD C   HP
Sbjct: 590 LCPKTCDICNETHP 603


>Z95621-2|CAB09131.1|  330|Caenorhabditis elegans Hypothetical
           protein ZK863.2 protein.
          Length = 330

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = -2

Query: 195 GDPGASGEDVSCAKSEGELTSLGSPGPP 112
           G+PGA G+    A S GE    G PGPP
Sbjct: 122 GNPGADGD----AGSPGEAGGAGPPGPP 145


>Z78019-9|CAB01457.1|  330|Caenorhabditis elegans Hypothetical
           protein ZK863.2 protein.
          Length = 330

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = -2

Query: 195 GDPGASGEDVSCAKSEGELTSLGSPGPP 112
           G+PGA G+    A S GE    G PGPP
Sbjct: 122 GNPGADGD----AGSPGEAGGAGPPGPP 145


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,023,590
Number of Sequences: 27780
Number of extensions: 280567
Number of successful extensions: 1035
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1034
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)