Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0301
         (724 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    27   0.18 
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    25   0.96 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    24   1.3  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    23   3.9  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   3.9  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           22   6.7  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   6.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   6.7  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 27.1 bits (57), Expect = 0.18
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +1

Query: 10  PHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 111
           P +AG+      G   ICGA++++    +TAAHC
Sbjct: 173 PMMAGIKRTYEPGM--ICGATIISKRYVLTAAHC 204


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 24.6 bits (51), Expect = 0.96
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +3

Query: 18  CWTCDRTDEWQNFH 59
           CW CD+ +E++  H
Sbjct: 467 CWVCDQCEEYEYVH 480


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = -3

Query: 323 VASTG*VDALDVVGEANMVVVDDATSLWRVSML*LPCI 210
           +AS+G V A +    A++    DA S W + ++ +PC+
Sbjct: 162 IASSGVVSAGECGPAADVDEKTDANSWWALILVIVPCL 199


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 278 LHQQHPAHQPSQWKQQ 325
           +H QHP  QP Q + Q
Sbjct: 172 MHTQHPHMQPQQGQHQ 187


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = +3

Query: 18  CWTCDRTDEWQ 50
           CW CD+ +E++
Sbjct: 557 CWVCDQCEEYE 567


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 109 CWRTRRAQARQFTLALGTANI 171
           CW TR+    Q    +GT+N+
Sbjct: 459 CWDTRKEYIPQNLGVIGTSNL 479


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +1

Query: 385 EPTTNKNAK*ASRS 426
           EP TNKN K  SRS
Sbjct: 239 EPGTNKNGKFFSRS 252


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 3/27 (11%)
 Frame = -2

Query: 189 PGAS---GEDVSCAKSEGELTSLGSPG 118
           PG S   GE  S A ++G  T+  SPG
Sbjct: 893 PGCSSKNGEPTSAAFAQGFATAASSPG 919



 Score = 21.4 bits (43), Expect = 8.9
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 415  ASRSLPTPSAPARLETM*SLPPPS 486
            AS   P P  P R+ T+   P PS
Sbjct: 1359 ASGGRPVPERPERVPTVDLSPSPS 1382


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,080
Number of Sequences: 438
Number of extensions: 3602
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)