Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0299
         (605 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.        25   1.4  
AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.        25   1.4  
AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.        25   1.4  
AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.        25   1.4  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    25   1.4  
AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    23   5.8  
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    23   5.8  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    23   7.7  

>AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -3

Query: 168 CSAFMSFVTIFLECPDGSKWLVCSDASFLVRC 73
           CS   SF   F E  DG +  +CS     +RC
Sbjct: 47  CSCDESFFGPFCETKDGEQPALCSSYEDCIRC 78


>AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -3

Query: 168 CSAFMSFVTIFLECPDGSKWLVCSDASFLVRC 73
           CS   SF   F E  DG +  +CS     +RC
Sbjct: 47  CSCDESFFGPFCETKDGEQPALCSSYEDCIRC 78


>AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -3

Query: 168 CSAFMSFVTIFLECPDGSKWLVCSDASFLVRC 73
           CS   SF   F E  DG +  +CS     +RC
Sbjct: 47  CSCDESFFGPFCETKDGEQPALCSSYEDCIRC 78


>AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -3

Query: 168 CSAFMSFVTIFLECPDGSKWLVCSDASFLVRC 73
           CS   SF   F E  DG +  +CS     +RC
Sbjct: 47  CSCDESFFGPFCETKDGEQPALCSSYEDCIRC 78


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -3

Query: 168 CSAFMSFVTIFLECPDGSKWLVCSDASFLVRC 73
           CS   SF   F E  DG +  +CS     +RC
Sbjct: 623 CSCDESFFGPFCETKDGEQPALCSSYEDCIRC 654


>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +2

Query: 5   FFDEYDYYNFDHDKHIFTGHGG 70
           F D +D+++F+  +H+ T  GG
Sbjct: 64  FEDNFDFFDFEKWEHVNTLAGG 85


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +2

Query: 5   FFDEYDYYNFDHDKHIFTGHGG 70
           F D +D+++F+  +H+ T  GG
Sbjct: 64  FEDNFDFFDFEKWEHVNTLAGG 85


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +1

Query: 337 FFCSHKISTSPTHRGCDLERDNATNEPSSKSVYFGRNTVPVSDLE*WAR 483
           F    +  T P   G ++ R++      S S  FG  TVPV  ++ ++R
Sbjct: 314 FASIRRTMTIPRSYGTNV-RESRRQLNISSSQLFGNGTVPVQQIQLYSR 361


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 626,954
Number of Sequences: 2352
Number of extensions: 13673
Number of successful extensions: 25
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)