Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0299
(605 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22181-7|CAA80189.2| 62|Caenorhabditis elegans Hypothetical pr... 32 0.28
Z34976-1|CAA84428.1| 681|Caenorhabditis elegans Cog2 protein pr... 30 1.5
U61947-9|AAB03139.2| 681|Caenorhabditis elegans Conserved oligo... 30 1.5
Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p... 28 5.9
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr... 28 5.9
U88308-3|AAB42329.2| 430|Caenorhabditis elegans Resistance to i... 27 7.9
U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical pr... 27 7.9
U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical pr... 27 7.9
U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical pr... 27 7.9
>Z22181-7|CAA80189.2| 62|Caenorhabditis elegans Hypothetical
protein ZK632.9 protein.
Length = 62
Score = 32.3 bits (70), Expect = 0.28
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 65 GGKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHNKK 178
G +RTK + EH + P G +RK+V N E +K
Sbjct: 23 GSGKRTKSDRVEHKHASQPGGDTRKVVQTASNGEAKRK 60
>Z34976-1|CAA84428.1| 681|Caenorhabditis elegans Cog2 protein
protein.
Length = 681
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = -1
Query: 362 VEILCEQKNA*DVPSISETSIHPNTPRVSAIASSFRWQLNSPSASHSCLLISNPSSVWCL 183
++ LC Q + + SE +H +VS + +RW SP +HS +++ V L
Sbjct: 501 IDSLCVQIDDSIIEMFSEV-LHQEIAQVSDVPKQYRWTKKSPPTTHSKYVVTAIEMVENL 559
Query: 182 K 180
K
Sbjct: 560 K 560
>U61947-9|AAB03139.2| 681|Caenorhabditis elegans Conserved
oligomeric golgi (cog)component protein 2 protein.
Length = 681
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = -1
Query: 362 VEILCEQKNA*DVPSISETSIHPNTPRVSAIASSFRWQLNSPSASHSCLLISNPSSVWCL 183
++ LC Q + + SE +H +VS + +RW SP +HS +++ V L
Sbjct: 501 IDSLCVQIDDSIIEMFSEV-LHQEIAQVSDVPKQYRWTKKSPPTTHSKYVVTAIEMVENL 559
Query: 182 K 180
K
Sbjct: 560 K 560
>Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/64 (23%), Positives = 27/64 (42%)
Frame = +2
Query: 14 EYDYYNFDHDKHIFTGHGGKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHNKKTSNTK 193
+ D + H+ + G+ KKE+ + T+ +PS T+ N E + K K
Sbjct: 146 DLDAVSASSSSHLISEEDGEVGEKKESEQPTDMVEPSSAPTTEETETENEEEDDKEKTDK 205
Query: 194 H*MD 205
+D
Sbjct: 206 EKLD 209
>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/64 (23%), Positives = 27/64 (42%)
Frame = +2
Query: 14 EYDYYNFDHDKHIFTGHGGKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHNKKTSNTK 193
+ D + H+ + G+ KKE+ + T+ +PS T+ N E + K K
Sbjct: 146 DLDAVSASSSSHLISEEDGEVGEKKESEQPTDMVEPSSAPTTEETETENEEEDDKEKTDK 205
Query: 194 H*MD 205
+D
Sbjct: 206 EKLD 209
>U88308-3|AAB42329.2| 430|Caenorhabditis elegans Resistance to
inhibitors of cholinesteraseprotein 19 protein.
Length = 430
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = +2
Query: 17 YDYYNFDHDKHIFTGHGGKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAE 166
Y+ Y+F+ H+ TG ++ K E E P G+ ++ L E
Sbjct: 265 YNNYDFEILSHLATGTKPERERKSEKEESAKTSQPRGNEEELKNLLFGRE 314
>U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical
protein C17H11.6c protein.
Length = 778
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 352 KISTSPTHRGCDLERDN 402
K+S+S HRGC +ERD+
Sbjct: 594 KLSSSSIHRGCVIERDD 610
>U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical
protein C17H11.6b protein.
Length = 796
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 352 KISTSPTHRGCDLERDN 402
K+S+S HRGC +ERD+
Sbjct: 597 KLSSSSIHRGCVIERDD 613
>U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical
protein C17H11.6a protein.
Length = 793
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 352 KISTSPTHRGCDLERDN 402
K+S+S HRGC +ERD+
Sbjct: 594 KLSSSSIHRGCVIERDD 610
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,722,334
Number of Sequences: 27780
Number of extensions: 288955
Number of successful extensions: 808
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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