Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0298
         (746 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    24   4.3  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              24   5.7  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    24   5.7  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   5.7  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   7.6  

>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 11/39 (28%), Positives = 23/39 (58%)
 Frame = -2

Query: 430 IQDKL*QQSKINNSNIVTKTLYKSGST*RVYTFLRNVKF 314
           +Q +L Q+S++ +SN+ + T  ++    ++   L  VKF
Sbjct: 78  LQQQLLQKSRLKSSNLKSTTYTRNTENDKLTRHLNTVKF 116


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 3  SSRILRPRASSSLVKLVEMLK 65
          S R+LRPRA S  +  V+ LK
Sbjct: 32 SGRVLRPRARSVSLNRVDALK 52


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +1

Query: 373 F*LLYCYYLFSIVVTICLVL 432
           F L +C++LF IV+ + L+L
Sbjct: 708 FWLFHCHFLFHIVIGMNLIL 727


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +2

Query: 92  YNTGQKAKPVVSFIAGLTAPPG 157
           YN GQK +P    + GL  P G
Sbjct: 223 YNKGQKGEPGNDGLEGLPGPQG 244


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 165  IRRPGGAVKPAINDTTG 115
            + RPGGA++  + D  G
Sbjct: 1842 VERPGGAIRATVEDKRG 1858


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 724,757
Number of Sequences: 2352
Number of extensions: 13759
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)