Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0296
(594 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 32 0.005
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 30 0.015
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 30 0.015
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 30 0.020
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 29 0.045
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 25 0.42
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 25 0.42
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 25 0.42
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 25 0.42
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 23 1.7
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 23 2.3
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 3.9
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 6.9
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 6.9
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 21 6.9
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 9.1
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 31.9 bits (69), Expect = 0.005
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 224 HGNDYFQRFRNYNDKIFIYNNFYNSFMFYKKYIL 325
H N+ ++ NYN+K NN YN ++YK YI+
Sbjct: 91 HNNNNYKY--NYNNKYNYNNNNYNKKLYYKNYII 122
Score = 21.0 bits (42), Expect = 9.1
Identities = 8/25 (32%), Positives = 12/25 (48%)
Frame = +2
Query: 221 SHGNDYFQRFRNYNDKIFIYNNFYN 295
++ N Y NYN K++ N N
Sbjct: 99 NYNNKYNYNNNNYNKKLYYKNYIIN 123
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 30.3 bits (65), Expect = 0.015
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 212 IIRSHGNDY-FQRFRNYNDKIFIYNNFYNSFMFYKKYIL 325
II S N+Y + + NYN+ N YN ++YK YI+
Sbjct: 314 IISSLSNNYKYSNYNNYNNYNNNNYNNYNKKLYYKNYII 352
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 30.3 bits (65), Expect = 0.015
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 212 IIRSHGNDYFQRFRNYNDKIFIYN-NFYNSFMFYKKYIL 325
II S N+Y NYN+ + YN N YN ++YK YI+
Sbjct: 314 IISSLSNNY-----NYNNNNYKYNYNNYNKKLYYKNYII 347
Score = 23.8 bits (49), Expect = 1.3
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +2
Query: 194 LSILVSIIRSHGNDYFQRFRNYNDKIFIYNNFYN 295
+S L + + N+Y + NYN K++ N N
Sbjct: 315 ISSLSNNYNYNNNNYKYNYNNYNKKLYYKNYIIN 348
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 29.9 bits (64), Expect = 0.020
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +2
Query: 212 IIRSHGNDYFQRFRNYNDKIFIYNNFYNSFMFYKKYIL 325
II S N+Y ++ NYN+ YNN YN ++YK YI+
Sbjct: 81 IISSLSNNY--KYSNYNN----YNN-YNKKLYYKNYII 111
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 28.7 bits (61), Expect = 0.045
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +2
Query: 212 IIRSHGNDY-FQRFRNYNDKIFIYNNFYNSF-MFYKK 316
II S N+Y + + NYN+ YNN+ N++ YKK
Sbjct: 314 IISSLSNNYKYSNYNNYNNNYNNYNNYNNNYNNNYKK 350
Score = 26.6 bits (56), Expect = 0.18
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 221 SHGNDYFQRFRNYNDKIFIYNNFYNSFMFYKKYI 322
S+ N+Y + NYN+ YNN Y + YI
Sbjct: 325 SNYNNYNNNYNNYNNYNNNYNNNYKKLYYNINYI 358
Score = 24.2 bits (50), Expect = 0.98
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +2
Query: 260 NDKIFIYNNFYNSFMFYKKYILIGSNNI--IFYNI 358
N K YNN+ N++ Y Y +NN ++YNI
Sbjct: 321 NYKYSNYNNYNNNYNNYNNYNNNYNNNYKKLYYNI 355
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 25.4 bits (53), Expect = 0.42
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +2
Query: 212 IIRSHGNDYFQRFRNYNDKIFIYNNFYNSFMFYKKYILIGSNNII 346
II S N+Y ++ NYN+ YNN YN+ + Y + N II
Sbjct: 81 IISSLSNNY--KYSNYNNYNNNYNNNYNN-NYNNNYKKLYKNYII 122
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 25.4 bits (53), Expect = 0.42
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +2
Query: 212 IIRSHGNDYFQRFRNYNDKIFIYNNFYNSFMFYKKYILIGSNNII 346
II S N+Y ++ NYN+ YNN YN+ + Y + N II
Sbjct: 81 IISSLSNNY--KYSNYNNYNNNYNNNYNN-NYNNNYKKLYKNYII 122
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 25.4 bits (53), Expect = 0.42
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 212 IIRSHGNDYFQRFRNYNDKIFIYNNFYNSFMFY 310
II S N+Y NYN+ NN YN ++Y
Sbjct: 81 IISSLSNNYISNISNYNN-----NNNYNKKLYY 108
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 25.4 bits (53), Expect = 0.42
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 212 IIRSHGNDYFQRFRNYNDKIFIYNNFYNSFMFY 310
II S N+Y NYN+ NN YN ++Y
Sbjct: 319 IISSLSNNYISNISNYNN-----NNNYNKKLYY 346
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 23.4 bits (48), Expect = 1.7
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 212 IIRSHGNDYFQRFRNYNDKIFIYNNFYNSFMFY 310
II S N+Y NYN+ +N YN ++Y
Sbjct: 81 IISSLSNNYISNISNYNN-----DNNYNKKLYY 108
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.0 bits (47), Expect = 2.3
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +2
Query: 221 SHGNDYFQRFRNYNDKIFIYNNF 289
S+ N+Y + NYN K++ N+
Sbjct: 92 SNYNNYNNNYNNYNKKLYYNINY 114
Score = 21.0 bits (42), Expect = 9.1
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 212 IIRSHGNDYFQRFRNYNDKIFIYNNFYNSFMFYKKYILIGSNNI 343
II S N+Y NY++ YNN+ N++ Y K + N I
Sbjct: 81 IISSLSNNY-----NYSN----YNNYNNNYNNYNKKLYYNINYI 115
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 3.9
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 215 IRSHGNDYFQRFRNYNDKIFIYNNFYNSFMFYKK 316
I S+ N + NYN+ YNN YN+ YKK
Sbjct: 81 IISNNNSLSNNY-NYNNNYNNYNNNYNT--NYKK 111
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 6.9
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +2
Query: 212 IIRSHGNDYFQRFRNYNDKIFIYN 283
II S+ +Y NYN K YN
Sbjct: 303 IISSNNYNYKNYNNNYNSKKLYYN 326
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 6.9
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +2
Query: 212 IIRSHGNDYFQRFRNYNDKIFIYN 283
II S+ +Y NYN K YN
Sbjct: 314 IISSNNYNYKNYNNNYNSKKLYYN 337
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 21.4 bits (43), Expect = 6.9
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +2
Query: 254 NYNDKIFIYNNFYNSFMFYKKYILIGSN 337
N D+I + Y+S KY +GSN
Sbjct: 289 NKRDEIVLLTEAYSSLENTLKYYEVGSN 316
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.0 bits (42), Expect = 9.1
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 224 HGNDYFQRFRNYNDKIFIYNNFYNS 298
+ N+Y + N N YNN YN+
Sbjct: 325 NNNNYKYNYNNNNYNNNNYNNNYNN 349
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,901
Number of Sequences: 438
Number of extensions: 1401
Number of successful extensions: 21
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17359926
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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