Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0295
         (775 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    26   0.38 
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   4.7  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   8.3  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   8.3  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 25.8 bits (54), Expect = 0.38
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +2

Query: 224 SGFSTDTIAVNIPPGPCIIIYVFIC 298
           +GFST  I + I  G  I I  FIC
Sbjct: 312 AGFSTKDIGLTINAGLAIFILYFIC 336


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 359 FFTCCYLLCIFLACNV 312
           F+  CYL  + L CN+
Sbjct: 172 FYGFCYLWVLILICNI 187


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 265 WTLYYYLCIY 294
           WT YY +CI+
Sbjct: 288 WTPYYVMCIW 297


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 265 WTLYYYLCIY 294
           WT YY +CI+
Sbjct: 288 WTPYYVMCIW 297


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,263
Number of Sequences: 336
Number of extensions: 3491
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)