Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0294
(779 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1209 + 34948899-34948938,34949086-34949222,34949854-349499... 110 1e-24
11_01_0689 - 5678227-5678343,5678475-5678636,5678751-5678846,567... 97 1e-20
11_01_0686 - 5635207-5635323,5635483-5635644,5635727-5635822,563... 91 1e-18
11_01_0688 - 5667539-5667655,5667792-5667953,5668084-5668179,566... 90 2e-18
02_05_0070 - 25584690-25584806,25585151-25585312,25585396-255854... 80 2e-15
07_03_1306 - 25643469-25643609,25644008-25644169,25644496-256446... 71 8e-13
03_01_0633 - 4649267-4649383,4649480-4649641,4649735-4649895,465... 71 8e-13
10_01_0344 - 3777610-3777758,3777870-3777959,3778950-3779025,377... 66 3e-11
10_01_0343 - 3773274-3773390,3773476-3773637,3773758-3773853,377... 52 4e-07
03_01_0636 - 4664472-4664588,4664695-4664856,4664984-4665061,466... 51 9e-07
08_01_0065 + 452383-452629,452733-452868,453049-453118,453237-45... 39 0.005
05_03_0648 + 16563147-16565557,16565655-16565850 32 0.44
12_01_0849 + 7948693-7948996,7949829-7950610 29 5.5
11_04_0351 + 16666398-16666532,16666911-16667048,16667398-166683... 28 7.2
07_01_0616 + 4560866-4560952,4561144-4561208,4564481-4564913,456... 28 9.6
>02_05_1209 +
34948899-34948938,34949086-34949222,34949854-34949900,
34949990-34950315,34950640-34950722,34950801-34950876,
34951499-34951656,34951979-34952140,34952235-34952351
Length = 381
Score = 110 bits (265), Expect = 1e-24
Identities = 48/64 (75%), Positives = 58/64 (90%)
Frame = +3
Query: 318 NRIIGVDINPDKFEVAKKFGVNEFVNPKDYDKPIQQVLVDLTDGGLEYTFECIGNVGTMR 497
+RIIG+DI+ KF+VAK FGV EFVNPKD+DKPIQQV+VDLTDGG++Y+FECIGNV MR
Sbjct: 222 SRIIGIDIDSKKFDVAKNFGVTEFVNPKDHDKPIQQVIVDLTDGGVDYSFECIGNVSVMR 281
Query: 498 AALE 509
+ALE
Sbjct: 282 SALE 285
Score = 103 bits (248), Expect = 1e-22
Identities = 51/82 (62%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Frame = +1
Query: 7 EVRSTQGQGVMP-DGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCL 183
+VR+ G GVM D RF G+ +YHFMG STFSQYTVV ++S+ K+ APLDKVCL
Sbjct: 117 KVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCL 176
Query: 184 LGCGVPTGYGAALNTAKVEPGS 249
LGCGV TG GA NTAKVE GS
Sbjct: 177 LGCGVSTGLGAVWNTAKVEAGS 198
Score = 72.9 bits (171), Expect = 3e-13
Identities = 30/39 (76%), Positives = 33/39 (84%)
Frame = +2
Query: 497 SCTRACHKGWGVSVIIGVAAAGEEISTRPFQLVTGRTWK 613
S CHKGWG SVI+GVAA+G+EISTRPFQLVTGR WK
Sbjct: 282 SALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWK 320
Score = 56.0 bits (129), Expect = 3e-08
Identities = 23/41 (56%), Positives = 34/41 (82%)
Frame = +1
Query: 610 EGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKEI 732
+GTAFGG+KSR VP LV++YL K++ +DE+VTH++ L +I
Sbjct: 320 KGTAFGGFKSRSQVPWLVEKYLNKEIKVDEYVTHSMNLTDI 360
>11_01_0689 -
5678227-5678343,5678475-5678636,5678751-5678846,
5679345-5679406,5679648-5679723,5679847-5679929,
5680525-5680853,5681402-5681448,5681707-5681843,
5682093-5682126
Length = 380
Score = 97.5 bits (232), Expect = 1e-20
Identities = 41/70 (58%), Positives = 56/70 (80%)
Frame = +3
Query: 318 NRIIGVDINPDKFEVAKKFGVNEFVNPKDYDKPIQQVLVDLTDGGLEYTFECIGNVGTMR 497
+RIIGVD+NP KFE+AKKFG +FVNPKDYDKP+QQV++++T+GG++ + EC GN M
Sbjct: 221 SRIIGVDLNPAKFELAKKFGCTDFVNPKDYDKPVQQVIIEMTNGGVDRSVECTGNAAAMI 280
Query: 498 AALELAIRDG 527
+A E + DG
Sbjct: 281 SAFE-CVHDG 289
Score = 83.0 bits (196), Expect = 2e-16
Identities = 39/78 (50%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Frame = +1
Query: 16 STQGQGVMPDGTRRFRCKG-QELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLLGC 192
+T ++ DG RF +G Q +YHF+G STFS+YTVV + K+ AAPLDKVC+L C
Sbjct: 119 NTDRGAMIGDGQTRFTARGGQPVYHFLGTSTFSEYTVVHVGCVAKIHPAAPLDKVCVLSC 178
Query: 193 GVPTGYGAALNTAKVEPG 246
G+ TG+GA +N AK G
Sbjct: 179 GISTGFGATVNVAKPPKG 196
Score = 52.0 bits (119), Expect = 5e-07
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = +1
Query: 607 LEGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKEI 732
L GT FG YK R +P +V+ Y+ K+L L++F+TH+VP EI
Sbjct: 318 LRGTFFGNYKPRTDLPGVVEMYMNKELELEKFITHSVPFSEI 359
Score = 33.9 bits (74), Expect = 0.15
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 497 SCTRACHKGWGVSVIIGVAAAGEEISTRPFQLVTGRT 607
S H GWGV+V++GVA T P + RT
Sbjct: 281 SAFECVHDGWGVAVLVGVAGKDAAFKTHPTNFLNERT 317
>11_01_0686 -
5635207-5635323,5635483-5635644,5635727-5635822,
5635903-5635964,5636046-5636121,5636201-5636283,
5636369-5636694,5637524-5637570,5637668-5637804,
5638064-5638097
Length = 379
Score = 90.6 bits (215), Expect = 1e-18
Identities = 38/70 (54%), Positives = 54/70 (77%)
Frame = +3
Query: 318 NRIIGVDINPDKFEVAKKFGVNEFVNPKDYDKPIQQVLVDLTDGGLEYTFECIGNVGTMR 497
+RIIG+D+N ++FE A+KFG EFVNPKD+DKP+QQVL ++T+GG++ + EC GN+ M
Sbjct: 220 SRIIGIDLNANRFEEARKFGCTEFVNPKDHDKPVQQVLAEMTNGGVDRSVECTGNINAMI 279
Query: 498 AALELAIRDG 527
A E + DG
Sbjct: 280 QAFE-CVHDG 288
Score = 85.0 bits (201), Expect = 6e-17
Identities = 41/81 (50%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Frame = +1
Query: 10 VRSTQGQGVM-PDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLL 186
+R +GVM DG RF G+ +YHF+G STFS+YTV+ + K+ AAPLDKVC+L
Sbjct: 116 LRINTDRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPAAPLDKVCVL 175
Query: 187 GCGVPTGYGAALNTAKVEPGS 249
CG+ TG GA +N AK GS
Sbjct: 176 SCGISTGLGATINVAKPPKGS 196
Score = 52.0 bits (119), Expect = 5e-07
Identities = 20/42 (47%), Positives = 32/42 (76%)
Frame = +1
Query: 607 LEGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKEI 732
L+GT FG YK R +P +V+ Y++K+L +++F+TH+VP EI
Sbjct: 317 LKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFSEI 358
Score = 35.1 bits (77), Expect = 0.063
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 515 HKGWGVSVIIGVAAAGEEISTRPFQLVTGRTWK 613
H GWGV+V++GV E T P + RT K
Sbjct: 286 HDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLK 318
>11_01_0688 -
5667539-5667655,5667792-5667953,5668084-5668179,
5668278-5668339,5668434-5668509,5668612-5668694,
5668807-5669132,5669741-5669787,5669900-5670036,
5670135-5670168
Length = 379
Score = 89.8 bits (213), Expect = 2e-18
Identities = 38/70 (54%), Positives = 52/70 (74%)
Frame = +3
Query: 318 NRIIGVDINPDKFEVAKKFGVNEFVNPKDYDKPIQQVLVDLTDGGLEYTFECIGNVGTMR 497
+RIIGVD+NP KFE AKKFG +FVNPKD+ KP+ +VL+++T+GGL+ EC GN+ M
Sbjct: 220 SRIIGVDLNPAKFEQAKKFGCTDFVNPKDHSKPVHEVLIEMTNGGLDRAVECTGNINAMI 279
Query: 498 AALELAIRDG 527
+ E + DG
Sbjct: 280 SCFE-CVHDG 288
Score = 84.2 bits (199), Expect = 1e-16
Identities = 40/80 (50%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Frame = +1
Query: 10 VRSTQGQGVM-PDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLL 186
+R +GVM DG RF KG+ ++HF+G STFS+YTV+ L K+ APLDKVC+L
Sbjct: 116 LRINVDRGVMIGDGKSRFTIKGKPIFHFVGTSTFSEYTVIHVGCLAKINPEAPLDKVCIL 175
Query: 187 GCGVPTGYGAALNTAKVEPG 246
CG TG+GA +N AK + G
Sbjct: 176 SCGFSTGFGATVNVAKPKKG 195
Score = 53.2 bits (122), Expect = 2e-07
Identities = 21/42 (50%), Positives = 32/42 (76%)
Frame = +1
Query: 607 LEGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKEI 732
L+GT FG YK R +P +V+ Y++K+L L++F+TH+VP EI
Sbjct: 317 LKGTFFGNYKPRTDLPNVVELYMKKELELEKFITHSVPFSEI 358
Score = 37.1 bits (82), Expect = 0.016
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 497 SCTRACHKGWGVSVIIGVAAAGEEISTRPFQLVTGRTWK 613
SC H GWGV+V++GV + T P + +T K
Sbjct: 280 SCFECVHDGWGVAVLVGVPTKDDVFKTHPMNFLNEKTLK 318
>02_05_0070 - 25584690-25584806,25585151-25585312,25585396-25585491,
25585894-25585955,25586035-25586110,25586195-25586277,
25586456-25586778,25586882-25586928,25587014-25587150,
25587250-25587322,25588159-25588251,25588543-25588632,
25588684-25588786,25588869-25588981,25589181-25589778,
25589888-25590065,25590277-25590296,25590713-25590882,
25591245-25591485,25592997-25593199
Length = 994
Score = 80.2 bits (189), Expect = 2e-15
Identities = 32/62 (51%), Positives = 48/62 (77%)
Frame = +3
Query: 324 IIGVDINPDKFEVAKKFGVNEFVNPKDYDKPIQQVLVDLTDGGLEYTFECIGNVGTMRAA 503
IIGVD NP+K E K FGV +F+NP++ ++P+QQV+ LT+GG +Y+FEC+G+ G + A
Sbjct: 837 IIGVDTNPEKQEKGKAFGVTDFINPEELNEPVQQVVKRLTNGGADYSFECVGDTGVVSTA 896
Query: 504 LE 509
L+
Sbjct: 897 LQ 898
Score = 69.7 bits (163), Expect = 2e-12
Identities = 33/76 (43%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Frame = +1
Query: 28 QGVM-PDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLLGCGVPT 204
+GVM D RF +G+ +YH+ S+FS+YTVV KV P+D++CLL CGV
Sbjct: 737 RGVMHSDQKTRFSLRGKPVYHYCAVSSFSEYTVVHSGCAVKVGPTVPMDRICLLSCGVSA 796
Query: 205 GYGAALNTAKVEPGSN 252
G GAA A + GS+
Sbjct: 797 GLGAAWKVADISKGSS 812
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/52 (34%), Positives = 35/52 (67%)
Frame = +1
Query: 607 LEGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKEIMRHSI*CMLE 762
L+G+ FGG++ + +P LVD+Y K++ +D+ VTH++ + + ++ MLE
Sbjct: 932 LKGSLFGGWRPKSDLPLLVDKYANKEIQVDDLVTHDLSF-DYINKALELMLE 982
Score = 36.3 bits (80), Expect = 0.027
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 506 RACHKGWGVSVIIGVAAAGEEISTRPFQLVTGRTWKEQL 622
++C GWG++V +GV A E+S L++GRT K L
Sbjct: 898 QSCSDGWGLTVTLGVPKAKPEVSAHYALLLSGRTLKGSL 936
>07_03_1306 -
25643469-25643609,25644008-25644169,25644496-25644659,
25645117-25645192,25645569-25645651,25646393-25646669
Length = 300
Score = 71.3 bits (167), Expect = 8e-13
Identities = 33/71 (46%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Frame = +3
Query: 321 RIIGVDINPDKFEVAKKFGVNEFVNPKDY-DKPIQQVLVDLT-DGGLEYTFECIGNVGTM 494
RIIGVD+NPDKF+V K+ G+ +F+NP D K + +V+ ++T GG +Y FECIG+ M
Sbjct: 132 RIIGVDLNPDKFDVGKRLGMTDFINPNDTGGKTVSEVIKEMTGGGGADYCFECIGSTSVM 191
Query: 495 RAALELAIRDG 527
A + + R+G
Sbjct: 192 AEAFQ-STRNG 201
Score = 62.9 bits (146), Expect = 3e-10
Identities = 34/77 (44%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Frame = +1
Query: 31 GVMP-DGTRRFRC--KGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLLGCGVP 201
G+MP D T RF G+ + HF+ S+F++YTVV + K+ P CLL CG+
Sbjct: 32 GLMPRDRTTRFSSVSTGEPIRHFLSVSSFAEYTVVDITHIVKLDVGFPPAMACLLSCGIS 91
Query: 202 TGYGAALNTAKVEPGSN 252
TG GAA A VEPGS+
Sbjct: 92 TGVGAAWKVAAVEPGSS 108
Score = 48.4 bits (110), Expect = 6e-06
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = +1
Query: 613 GTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKEIMR 738
G+ FGG K + +P L +YL+K+L L+EF+TH + +EI R
Sbjct: 232 GSLFGGIKPKNDIPMLAQKYLDKELELEEFITHEMGFEEINR 273
>03_01_0633 -
4649267-4649383,4649480-4649641,4649735-4649895,
4650056-4650080,4650155-4650237,4650332-4650704
Length = 306
Score = 71.3 bits (167), Expect = 8e-13
Identities = 37/75 (49%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Frame = +1
Query: 31 GVMPDGTRRFRCK-GQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLLGCGVPTG 207
G+ DGT RFR + G ++HF+G S+FS+YTVV + +V A P LL CG TG
Sbjct: 66 GMPRDGTARFRDRHGAPIHHFLGVSSFSEYTVVDANQVVRVDPAVPPATASLLSCGATTG 125
Query: 208 YGAALNTAKVEPGSN 252
GAA AKVEPGS+
Sbjct: 126 VGAAWKLAKVEPGSS 140
Score = 59.7 bits (138), Expect = 3e-09
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Frame = +3
Query: 366 KKFGVNEFVNPKDY-DKPIQQVLVDLTDGGLEYTFECIGNVGTMRAALELAIRDG 527
KKFGV F+NP++ DKP+ Q ++++TDGG +Y FECIG M A + R+G
Sbjct: 162 KKFGVTHFINPQELGDKPVSQAIIEMTDGGADYCFECIGLASVMSDAFR-SSREG 215
Score = 55.6 bits (128), Expect = 4e-08
Identities = 22/40 (55%), Positives = 31/40 (77%)
Frame = +1
Query: 613 GTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKEI 732
G+ FGG K ++ +P L D+YL K+L LD+F+TH VPLK+I
Sbjct: 246 GSLFGGVKPKQDIPILADKYLNKELELDKFITHEVPLKDI 285
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +2
Query: 506 RACHKGWGVSVIIGVAAAGEEISTRPFQLVTGR 604
R+ +GWG ++I+GV G +S +++ G+
Sbjct: 210 RSSREGWGKTIILGVEMHGAPLSIPSLEILNGK 242
>10_01_0344 -
3777610-3777758,3777870-3777959,3778950-3779025,
3779206-3779288,3780456-3780799,3782064-3782113,
3782406-3782542,3782692-3782776
Length = 337
Score = 66.1 bits (154), Expect = 3e-11
Identities = 30/57 (52%), Positives = 38/57 (66%)
Frame = +1
Query: 79 LYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLLGCGVPTGYGAALNTAKVEPGS 249
+YHF+ STF++YTV+ K+ APL+K+ LL CGV TG GAA NTA V GS
Sbjct: 164 VYHFLNTSTFAEYTVIDSACAVKINPKAPLEKMSLLSCGVSTGVGAAWNTANVSKGS 220
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +3
Query: 318 NRIIGVDINPDKFEVAKKFGVNEFVNPKDY 407
+RIIGVDINP+KF +K+ + + N KDY
Sbjct: 244 SRIIGVDINPEKF--SKECALVQ--NDKDY 269
>10_01_0343 -
3773274-3773390,3773476-3773637,3773758-3773853,
3773956-3774009
Length = 142
Score = 52.4 bits (120), Expect = 4e-07
Identities = 20/51 (39%), Positives = 35/51 (68%)
Frame = +3
Query: 375 GVNEFVNPKDYDKPIQQVLVDLTDGGLEYTFECIGNVGTMRAALELAIRDG 527
G+ +F+N K KP+ +V++++TDGG++Y+FEC G +R A ++ DG
Sbjct: 2 GITDFINSKASGKPVHEVIMEMTDGGVDYSFECTGITDVLREAF-VSTHDG 51
Score = 32.3 bits (70), Expect = 0.44
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 515 HKGWGVSVIIGVAAAGEEISTRPFQLVTGR 604
H GWG++V++G+ A + P +L GR
Sbjct: 49 HDGWGLTVVLGIHATPRMLPLHPMELFDGR 78
>03_01_0636 -
4664472-4664588,4664695-4664856,4664984-4665061,
4665157-4665221,4665476-4665558,4666052-4666414,
4666512-4666555,4666632-4666765,4666881-4666917
Length = 360
Score = 51.2 bits (117), Expect = 9e-07
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +3
Query: 366 KKFGVNEFVNPKDY-DKPIQQVLVDLTDGGLEYTFECIGNVGTMRAA 503
K+FGV +FVNP DK + +V+ +TDGG +Y+FECIG M A
Sbjct: 222 KEFGVTDFVNPSQLGDKSVSEVINAMTDGGADYSFECIGISSVMTEA 268
Score = 46.0 bits (104), Expect = 3e-05
Identities = 28/64 (43%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +1
Query: 19 TQGQGVMPDGTRRF-RCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLLGCG 195
T G G+ DGT RF +G+ L + ++FSQYTVV + KV A P CLLGC
Sbjct: 118 TMGPGMRRDGTTRFWDGEGKPLSDTVAVTSFSQYTVVDVNQVVKVDPAVPPKIACLLGCC 177
Query: 196 VPTG 207
TG
Sbjct: 178 GGTG 181
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +1
Query: 613 GTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKEI 732
G+ FGG K + +P L ++ + K+L L++ VTH V L EI
Sbjct: 300 GSLFGGAKPKTDIPILAEKCMNKELELEKLVTHEVGLTEI 339
>08_01_0065 +
452383-452629,452733-452868,453049-453118,453237-453330,
453426-453639,453756-453897,454076-454246,454586-454780
Length = 422
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +1
Query: 22 QGQGVMPDG-TRRF-RCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLLGCG 195
+ +G + DG TR F R G+ +Y + ++Y VV +L + + P + +LGC
Sbjct: 165 RAKGTLYDGQTRLFLRSNGKPVYMY-SMGGLAEYCVVPANALAVLPNSLPYTESAILGCA 223
Query: 196 VPTGYGAALNTAKVEPGSN 252
V T YGA + A++ G +
Sbjct: 224 VFTAYGALRHAAEMRAGDS 242
>05_03_0648 + 16563147-16565557,16565655-16565850
Length = 868
Score = 32.3 bits (70), Expect = 0.44
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Frame = -3
Query: 630 TSKSCSFQVRPVTSWN-GRV--LISSPAAATPMIT 535
T+K + QVR T+W GRV L+ SPA+A P+IT
Sbjct: 416 TTKDPNSQVRDTTAWTLGRVFELLHSPASANPIIT 450
>12_01_0849 + 7948693-7948996,7949829-7950610
Length = 361
Score = 28.7 bits (61), Expect = 5.5
Identities = 9/36 (25%), Positives = 17/36 (47%)
Frame = +2
Query: 476 WKCRHHESCTRACHKGWGVSVIIGVAAAGEEISTRP 583
W+CRH + +R C +V+I + ++ P
Sbjct: 229 WRCRHCTASSRLCRLAGAAAVVIAILPRRRRVALHP 264
>11_04_0351 +
16666398-16666532,16666911-16667048,16667398-16668306,
16668383-16668511,16668774-16668996,16669085-16669231,
16669332-16669573,16669660-16669689,16669784-16669865,
16669968-16670128,16670775-16670898,16671206-16671414
Length = 842
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = -2
Query: 664 LQALVHFLYFCNLQKLFLPGATCNKL--EWT 578
L +L+ Y CNL K + G TC +L WT
Sbjct: 767 LLSLMLICYLCNLAKFNISGITCRRLFTSWT 797
>07_01_0616 +
4560866-4560952,4561144-4561208,4564481-4564913,
4565634-4565786,4565875-4565946,4567602-4567712,
4568344-4568584,4568743-4568821,4568892-4569018
Length = 455
Score = 27.9 bits (59), Expect = 9.6
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = +1
Query: 562 RRDQHSS----IPTCYRSHLEGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKE 729
R D+ SS P+ SH+ G G + + V KLVD+ + LP + H + +E
Sbjct: 87 RHDEDSSRGQETPSTIDSHMNGNVQDGVPADQDVLKLVDQQ-KSSLPSSP-INHGIAEQE 144
Query: 730 IMRHSI 747
H++
Sbjct: 145 ESNHTV 150
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,814,907
Number of Sequences: 37544
Number of extensions: 419263
Number of successful extensions: 1129
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1126
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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