Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0294
(779 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical ... 129 3e-30
U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol dehydro... 127 8e-30
AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical ... 127 8e-30
AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical ... 127 8e-30
AF039044-8|AAG24129.1| 717|Caenorhabditis elegans Nuclear hormo... 31 0.92
Z66511-6|CAA91318.1| 343|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z66515-1|CAA91347.1| 218|Caenorhabditis elegans Hypothetical pr... 29 3.7
AL117207-8|CAB60399.1| 362|Caenorhabditis elegans Hypothetical ... 29 4.9
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 29 4.9
>AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical
protein Y50D4C.2 protein.
Length = 554
Score = 129 bits (311), Expect = 3e-30
Identities = 56/81 (69%), Positives = 66/81 (81%)
Frame = +1
Query: 7 EVRSTQGQGVMPDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLL 186
++R +QG G MPDGT RF C G++L+HFMGCSTFS+YTVV +ISLCKV APL+KV LL
Sbjct: 289 KIRVSQGDGFMPDGTSRFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPQAPLEKVSLL 348
Query: 187 GCGVPTGYGAALNTAKVEPGS 249
GCG+ TGYGA LNT KVE GS
Sbjct: 349 GCGISTGYGAVLNTCKVEEGS 369
Score = 75.4 bits (177), Expect = 4e-14
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 4/69 (5%)
Frame = +3
Query: 321 RIIGVDINPDKFEVAKKFGVNEFVNPKDYDKP----IQQVLVDLTDGGLEYTFECIGNVG 488
+I+G+D+ KFE AK FG E +NPK + P Q LV+ DGG +YTFECIGNV
Sbjct: 394 KIVGIDLIESKFEKAKMFGATECINPKSVELPEGKSFQSWLVEQFDGGFDYTFECIGNVH 453
Query: 489 TMRAALELA 515
TMR ALE A
Sbjct: 454 TMRQALEAA 462
Score = 70.1 bits (164), Expect = 2e-12
Identities = 30/35 (85%), Positives = 32/35 (91%)
Frame = +2
Query: 509 ACHKGWGVSVIIGVAAAGEEISTRPFQLVTGRTWK 613
A HKGWGVS IIGVA AG+EI+TRPFQLVTGRTWK
Sbjct: 461 AAHKGWGVSCIIGVAGAGQEIATRPFQLVTGRTWK 495
Score = 60.1 bits (139), Expect = 2e-09
Identities = 25/41 (60%), Positives = 34/41 (82%)
Frame = +1
Query: 610 EGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKEI 732
+GTAFGG+KS ESVP+LVD+Y+ KKL +DEF+TH + +I
Sbjct: 495 KGTAFGGWKSVESVPRLVDDYMNKKLLIDEFITHRCNIDDI 535
>U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol
dehydrogenase protein.
Length = 384
Score = 127 bits (307), Expect = 8e-30
Identities = 55/81 (67%), Positives = 66/81 (81%)
Frame = +1
Query: 7 EVRSTQGQGVMPDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLL 186
++R +QG G MPDG+ RF C G++L+HFMGCSTFS+YTVV +ISLCKV APL+KV LL
Sbjct: 116 KIRISQGNGFMPDGSSRFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLL 175
Query: 187 GCGVPTGYGAALNTAKVEPGS 249
GCG+ TGYGA LNT KVE GS
Sbjct: 176 GCGISTGYGAVLNTCKVEEGS 196
Score = 74.1 bits (174), Expect = 1e-13
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 4/69 (5%)
Frame = +3
Query: 321 RIIGVDINPDKFEVAKKFGVNEFVNPKDYDKP----IQQVLVDLTDGGLEYTFECIGNVG 488
+I+G+D+ KFE AK FG E +NPK + P Q LV+ DGG +YTFECIGNV
Sbjct: 221 KIVGIDLIESKFESAKFFGATECINPKSVELPEGKSFQAWLVEQFDGGFDYTFECIGNVH 280
Query: 489 TMRAALELA 515
TMR ALE A
Sbjct: 281 TMRQALEAA 289
Score = 70.1 bits (164), Expect = 2e-12
Identities = 30/35 (85%), Positives = 32/35 (91%)
Frame = +2
Query: 509 ACHKGWGVSVIIGVAAAGEEISTRPFQLVTGRTWK 613
A HKGWGVS IIGVA AG+EI+TRPFQLVTGRTWK
Sbjct: 288 AAHKGWGVSCIIGVAGAGQEIATRPFQLVTGRTWK 322
Score = 59.3 bits (137), Expect = 3e-09
Identities = 25/41 (60%), Positives = 34/41 (82%)
Frame = +1
Query: 610 EGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKEI 732
+GTAFGG+KS ESVP+LVD+Y+ KKL +DEF+TH + +I
Sbjct: 322 KGTAFGGWKSVESVPRLVDDYMNKKLLIDEFITHRWNIDDI 362
>AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical
protein H24K24.3a protein.
Length = 384
Score = 127 bits (307), Expect = 8e-30
Identities = 55/81 (67%), Positives = 66/81 (81%)
Frame = +1
Query: 7 EVRSTQGQGVMPDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLL 186
++R +QG G MPDG+ RF C G++L+HFMGCSTFS+YTVV +ISLCKV APL+KV LL
Sbjct: 116 KIRISQGNGFMPDGSSRFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLL 175
Query: 187 GCGVPTGYGAALNTAKVEPGS 249
GCG+ TGYGA LNT KVE GS
Sbjct: 176 GCGISTGYGAVLNTCKVEEGS 196
Score = 74.1 bits (174), Expect = 1e-13
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 4/69 (5%)
Frame = +3
Query: 321 RIIGVDINPDKFEVAKKFGVNEFVNPKDYDKP----IQQVLVDLTDGGLEYTFECIGNVG 488
+I+G+D+ KFE AK FG E +NPK + P Q LV+ DGG +YTFECIGNV
Sbjct: 221 KIVGIDLIESKFESAKFFGATECINPKSVELPEGKSFQAWLVEQFDGGFDYTFECIGNVH 280
Query: 489 TMRAALELA 515
TMR ALE A
Sbjct: 281 TMRQALEAA 289
Score = 70.1 bits (164), Expect = 2e-12
Identities = 30/35 (85%), Positives = 32/35 (91%)
Frame = +2
Query: 509 ACHKGWGVSVIIGVAAAGEEISTRPFQLVTGRTWK 613
A HKGWGVS IIGVA AG+EI+TRPFQLVTGRTWK
Sbjct: 288 AAHKGWGVSCIIGVAGAGQEIATRPFQLVTGRTWK 322
Score = 59.3 bits (137), Expect = 3e-09
Identities = 25/41 (60%), Positives = 34/41 (82%)
Frame = +1
Query: 610 EGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKEI 732
+GTAFGG+KS ESVP+LVD+Y+ KKL +DEF+TH + +I
Sbjct: 322 KGTAFGGWKSVESVPRLVDDYMNKKLLIDEFITHRWNIDDI 362
>AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical
protein H24K24.3b protein.
Length = 386
Score = 127 bits (307), Expect = 8e-30
Identities = 55/81 (67%), Positives = 66/81 (81%)
Frame = +1
Query: 7 EVRSTQGQGVMPDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLL 186
++R +QG G MPDG+ RF C G++L+HFMGCSTFS+YTVV +ISLCKV APL+KV LL
Sbjct: 118 KIRISQGNGFMPDGSSRFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLL 177
Query: 187 GCGVPTGYGAALNTAKVEPGS 249
GCG+ TGYGA LNT KVE GS
Sbjct: 178 GCGISTGYGAVLNTCKVEEGS 198
Score = 74.1 bits (174), Expect = 1e-13
Identities = 37/69 (53%), Positives = 45/69 (65%), Gaps = 4/69 (5%)
Frame = +3
Query: 321 RIIGVDINPDKFEVAKKFGVNEFVNPKDYDKP----IQQVLVDLTDGGLEYTFECIGNVG 488
+I+G+D+ KFE AK FG E +NPK + P Q LV+ DGG +YTFECIGNV
Sbjct: 223 KIVGIDLIESKFESAKFFGATECINPKSVELPEGKSFQAWLVEQFDGGFDYTFECIGNVH 282
Query: 489 TMRAALELA 515
TMR ALE A
Sbjct: 283 TMRQALEAA 291
Score = 70.1 bits (164), Expect = 2e-12
Identities = 30/35 (85%), Positives = 32/35 (91%)
Frame = +2
Query: 509 ACHKGWGVSVIIGVAAAGEEISTRPFQLVTGRTWK 613
A HKGWGVS IIGVA AG+EI+TRPFQLVTGRTWK
Sbjct: 290 AAHKGWGVSCIIGVAGAGQEIATRPFQLVTGRTWK 324
Score = 59.3 bits (137), Expect = 3e-09
Identities = 25/41 (60%), Positives = 34/41 (82%)
Frame = +1
Query: 610 EGTAFGGYKSRESVPKLVDEYLEKKLPLDEFVTHNVPLKEI 732
+GTAFGG+KS ESVP+LVD+Y+ KKL +DEF+TH + +I
Sbjct: 324 KGTAFGGWKSVESVPRLVDDYMNKKLLIDEFITHRWNIDDI 364
>AF039044-8|AAG24129.1| 717|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 83 protein.
Length = 717
Score = 31.1 bits (67), Expect = 0.92
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -2
Query: 652 VHFLYFCNLQKLFLPGATCNKLEWTSADLFSSSSYTND 539
+ + C L+K F G NK + TS DL SSSS ++D
Sbjct: 419 IQYCKICRLKKCFNAGMDPNKFQ-TSRDLISSSSQSSD 455
>Z66511-6|CAA91318.1| 343|Caenorhabditis elegans Hypothetical
protein F07A11.5 protein.
Length = 343
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 342 NPDKFEVAKKFGVNEFVNPKDYDKPIQQVLVDLTD 446
N FE+A+ GV F+NP D + + +++L D
Sbjct: 179 NRRAFEIARSHGVTTFLNPAPGDPNMDKTILELVD 213
>Z66515-1|CAA91347.1| 218|Caenorhabditis elegans Hypothetical
protein R53.2 protein.
Length = 218
Score = 29.1 bits (62), Expect = 3.7
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 646 SVPKLVDEYLEKKLPLDEFVTH 711
S+ KL+D+YL K++ +DE H
Sbjct: 59 SIGKLIDQYLRKEIDMDEHALH 80
>AL117207-8|CAB60399.1| 362|Caenorhabditis elegans Hypothetical
protein Y60A3A.14 protein.
Length = 362
Score = 28.7 bits (61), Expect = 4.9
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -3
Query: 84 VEFLSFTAESPSAIWHHTLTL 22
V+ F+AE+ + WHHT++L
Sbjct: 157 VQIFRFSAENSTGFWHHTISL 177
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +2
Query: 482 CRHHESCTRA--CHKGWGVSVIIGV-AAAGEEIST-RPFQ-LVTGRTWKEQLLEVTKVEK 646
CRHH CT + C+ G G S A + I T +PF+ +T + +L K+EK
Sbjct: 1345 CRHHYDCTHSSCCYNGCGTSCQFETRQLAIKPIKTLKPFKPSKPSKTTRRPILSSLKIEK 1404
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,380,065
Number of Sequences: 27780
Number of extensions: 349680
Number of successful extensions: 911
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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