Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0293
(747 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY094841-1|AAM11194.1| 204|Drosophila melanogaster RE01373p pro... 139 3e-33
AF030251-1|AAB84223.1| 204|Drosophila melanogaster ribosomal L1... 139 3e-33
AY075262-1|AAL68129.1| 656|Drosophila melanogaster AT22312p pro... 31 1.7
AE014298-2571|AAO41694.1| 592|Drosophila melanogaster CG5613-PB... 31 1.7
AE014298-2570|AAF48729.1| 655|Drosophila melanogaster CG5613-PA... 31 1.7
AE013599-3185|AAG22188.1| 1542|Drosophila melanogaster CG9485-PA... 29 6.7
AE013599-3184|AAF46713.3| 1546|Drosophila melanogaster CG9485-PC... 29 6.7
AE013599-3183|AAM70868.2| 1629|Drosophila melanogaster CG9485-PB... 29 6.7
X76210-1|CAA53803.1| 389|Drosophila melanogaster homeotic ultra... 29 8.9
X05723-1|CAA29194.1| 389|Drosophila melanogaster Ultrabithorax ... 29 8.9
U31961-9|AAA84412.1| 389|Drosophila melanogaster UBXIB protein. 29 8.9
AE014297-2261|AAF55355.2| 389|Drosophila melanogaster CG10388-P... 29 8.9
>AY094841-1|AAM11194.1| 204|Drosophila melanogaster RE01373p
protein.
Length = 204
Score = 139 bits (337), Expect = 3e-33
Identities = 60/70 (85%), Positives = 69/70 (98%)
Frame = +2
Query: 44 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGYV 223
MGAYRY+QELYRKK SDVMR+LLR+RVWQYRQLT++HR+PRPTRPDKARRLGYRAKQG+V
Sbjct: 1 MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQGFV 60
Query: 224 VFRIRVRRGG 253
++RIRVRRGG
Sbjct: 61 IYRIRVRRGG 70
Score = 125 bits (301), Expect = 7e-29
Identities = 57/80 (71%), Positives = 61/80 (76%)
Frame = +1
Query: 256 KRPVAKGATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFE 435
KRPV KG TYGKPKSHGVNQLKP R LQSIAEE +SYW+AQD+SYKYFE
Sbjct: 72 KRPVPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYWIAQDASYKYFE 131
Query: 436 VILVDPSHKAIRRDPKINWI 495
VIL+D H AIRRDPKINWI
Sbjct: 132 VILIDTHHSAIRRDPKINWI 151
Score = 81.8 bits (193), Expect = 9e-16
Identities = 36/48 (75%), Positives = 42/48 (87%)
Frame = +3
Query: 510 KHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 653
KHRE+RGLTSAG+SSRG+GKG+RYSQT GGSRRAAW R+N + RKR
Sbjct: 157 KHRELRGLTSAGKSSRGIGKGYRYSQTIGGSRRAAWKRKNREHMHRKR 204
>AF030251-1|AAB84223.1| 204|Drosophila melanogaster ribosomal L15
(YL10) protein homologueprotein.
Length = 204
Score = 139 bits (337), Expect = 3e-33
Identities = 60/70 (85%), Positives = 69/70 (98%)
Frame = +2
Query: 44 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGYV 223
MGAYRY+QELYRKK SDVMR+LLR+RVWQYRQLT++HR+PRPTRPDKARRLGYRAKQG+V
Sbjct: 1 MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQGFV 60
Query: 224 VFRIRVRRGG 253
++RIRVRRGG
Sbjct: 61 IYRIRVRRGG 70
Score = 125 bits (301), Expect = 7e-29
Identities = 57/80 (71%), Positives = 61/80 (76%)
Frame = +1
Query: 256 KRPVAKGATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFE 435
KRPV KG TYGKPKSHGVNQLKP R LQSIAEE +SYW+AQD+SYKYFE
Sbjct: 72 KRPVPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYWIAQDASYKYFE 131
Query: 436 VILVDPSHKAIRRDPKINWI 495
VIL+D H AIRRDPKINWI
Sbjct: 132 VILIDTHHSAIRRDPKINWI 151
Score = 81.8 bits (193), Expect = 9e-16
Identities = 36/48 (75%), Positives = 42/48 (87%)
Frame = +3
Query: 510 KHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 653
KHRE+RGLTSAG+SSRG+GKG+RYSQT GGSRRAAW R+N + RKR
Sbjct: 157 KHRELRGLTSAGKSSRGIGKGYRYSQTIGGSRRAAWKRKNREHMHRKR 204
>AY075262-1|AAL68129.1| 656|Drosophila melanogaster AT22312p
protein.
Length = 656
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 459 QGHSSRS*DQLDRECCTKHREMRGLTSAGRSSRG 560
+GH RS Q+ RE +HR GL GRS +G
Sbjct: 323 EGHLERSAQQVRREQSPRHRVFMGLDVFGRSRKG 356
>AE014298-2571|AAO41694.1| 592|Drosophila melanogaster CG5613-PB,
isoform B protein.
Length = 592
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 459 QGHSSRS*DQLDRECCTKHREMRGLTSAGRSSRG 560
+GH RS Q+ RE +HR GL GRS +G
Sbjct: 259 EGHLERSAQQVRREQSPRHRVFMGLDVFGRSRKG 292
>AE014298-2570|AAF48729.1| 655|Drosophila melanogaster CG5613-PA,
isoform A protein.
Length = 655
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 459 QGHSSRS*DQLDRECCTKHREMRGLTSAGRSSRG 560
+GH RS Q+ RE +HR GL GRS +G
Sbjct: 322 EGHLERSAQQVRREQSPRHRVFMGLDVFGRSRKG 355
>AE013599-3185|AAG22188.1| 1542|Drosophila melanogaster CG9485-PA,
isoform A protein.
Length = 1542
Score = 29.1 bits (62), Expect = 6.7
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 187 PKTRLPC*TRLCCIQNPCATWWPKRPVAKGATYGKPKSHGVNQLKPTRNLQSIAEE 354
P + C T L + P TW PK VAK A Y + +L +R+ S+ ++
Sbjct: 146 PLDSVRCQTVLAKLLGPLDTWEPKLRVAKEAGYNVIHFTPIQELGGSRSCYSLRDQ 201
>AE013599-3184|AAF46713.3| 1546|Drosophila melanogaster CG9485-PC,
isoform C protein.
Length = 1546
Score = 29.1 bits (62), Expect = 6.7
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 187 PKTRLPC*TRLCCIQNPCATWWPKRPVAKGATYGKPKSHGVNQLKPTRNLQSIAEE 354
P + C T L + P TW PK VAK A Y + +L +R+ S+ ++
Sbjct: 150 PLDSVRCQTVLAKLLGPLDTWEPKLRVAKEAGYNVIHFTPIQELGGSRSCYSLRDQ 205
>AE013599-3183|AAM70868.2| 1629|Drosophila melanogaster CG9485-PB,
isoform B protein.
Length = 1629
Score = 29.1 bits (62), Expect = 6.7
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 187 PKTRLPC*TRLCCIQNPCATWWPKRPVAKGATYGKPKSHGVNQLKPTRNLQSIAEE 354
P + C T L + P TW PK VAK A Y + +L +R+ S+ ++
Sbjct: 233 PLDSVRCQTVLAKLLGPLDTWEPKLRVAKEAGYNVIHFTPIQELGGSRSCYSLRDQ 288
>X76210-1|CAA53803.1| 389|Drosophila melanogaster homeotic
ultrabithorax protein protein.
Length = 389
Score = 28.7 bits (61), Expect = 8.9
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +3
Query: 507 TKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 653
TK + LT G S +GK RYS++ GS WL N L+ R ++
Sbjct: 254 TKSKIRSDLTQYGGISTDMGK--RYSESLAGSLLPDWLGTNGLRRRGRQ 300
>X05723-1|CAA29194.1| 389|Drosophila melanogaster Ultrabithorax
gene product protein.
Length = 389
Score = 28.7 bits (61), Expect = 8.9
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +3
Query: 507 TKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 653
TK + LT G S +GK RYS++ GS WL N L+ R ++
Sbjct: 254 TKSKIRSDLTQYGGISTDMGK--RYSESLAGSLLPDWLGTNGLRRRGRQ 300
>U31961-9|AAA84412.1| 389|Drosophila melanogaster UBXIB protein.
Length = 389
Score = 28.7 bits (61), Expect = 8.9
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +3
Query: 507 TKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 653
TK + LT G S +GK RYS++ GS WL N L+ R ++
Sbjct: 254 TKSKIRSDLTQYGGISTDMGK--RYSESLAGSLLPDWLGTNGLRRRGRQ 300
>AE014297-2261|AAF55355.2| 389|Drosophila melanogaster CG10388-PA,
isoform A protein.
Length = 389
Score = 28.7 bits (61), Expect = 8.9
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +3
Query: 507 TKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 653
TK + LT G S +GK RYS++ GS WL N L+ R ++
Sbjct: 254 TKSKIRSDLTQYGGISTDMGK--RYSESLAGSLLPDWLGTNGLRRRGRQ 300
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,853,502
Number of Sequences: 53049
Number of extensions: 729833
Number of successful extensions: 1944
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1944
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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