Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0292
         (779 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     26   0.29 
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    26   0.29 
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           26   0.29 
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    24   1.2  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    24   1.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.1  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   2.7  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    23   2.7  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   2.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   3.6  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   4.8  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   6.3  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   6.3  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   6.3  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 13/47 (27%), Positives = 18/47 (38%)
 Frame = +1

Query: 304 PPAPRYYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRP 444
           PP      P  +   +P     N QPPV  S+      A++ P   P
Sbjct: 95  PPIHHQIRPPILHDTQPMCESLNTQPPVTSSSNILQNLADITPNVTP 141


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 13/47 (27%), Positives = 18/47 (38%)
 Frame = +1

Query: 304 PPAPRYYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRP 444
           PP      P  +   +P     N QPPV  S+      A++ P   P
Sbjct: 95  PPIHHQIRPPILHDTQPMCESLNTQPPVTSSSNILQNLADITPNVTP 141


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 13/47 (27%), Positives = 18/47 (38%)
 Frame = +1

Query: 304 PPAPRYYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRP 444
           PP      P  +   +P     N QPPV  S+      A++ P   P
Sbjct: 95  PPIHHQIRPPILHDTQPMCESLNTQPPVTSSSNILQNLADITPNVTP 141


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
 Frame = +1

Query: 307 PAPRYYGP--AQMTQIRPTTPRWNAQPP---VRPSTQAAS 411
           P+P+   P  A+   + PTTP   + PP   + PS  A+S
Sbjct: 78  PSPKRSSPILAEKVSVSPTTPPTPSPPPEERLTPSKDASS 117


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 11/35 (31%), Positives = 12/35 (34%)
 Frame = +1

Query: 355 TTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAP 459
           TTPRW        +T     Y        P PR P
Sbjct: 51  TTPRWGCARASSATTMGGPRYGRAAAQGMPYPRFP 85


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 13/48 (27%), Positives = 19/48 (39%)
 Frame = +3

Query: 462  PIYNKNIVRCKTHNWTQGVAAAAASIRPPLVSQSSRPANYKYTPNMRN 605
            P Y ++    K +N  QGV +A          Q    A Y+    +RN
Sbjct: 868  PFYGQSFTLTKGNNHDQGVPSAGPGEAGEYTKQPGMLAYYEICNRIRN 915


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +3

Query: 498 HNWTQGVAAAAASIRPPLVSQSSRPANYKYTPNMRNPPAPQ 620
           +N+T  +  A     PP  S       Y YT +   PP+PQ
Sbjct: 23  YNYTSDIPNAQQM--PPHYSNYHYEDPYGYTGSEETPPSPQ 61


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +3

Query: 498 HNWTQGVAAAAASIRPPLVSQSSRPANYKYTPNMRNPPAPQ 620
           +N+T  +  A     PP  S       Y YT +   PP+PQ
Sbjct: 23  YNYTSDIPNAQQM--PPHYSNYHYEDPYGYTGSEETPPSPQ 61


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +3

Query: 498 HNWTQGVAAAAASIRPPLVSQSSRPANYKYTPNMRNPPAPQ 620
           +N+T  +  A     PP  S       Y YT +   PP+PQ
Sbjct: 23  YNYTSDIPNAQQM--PPHYSNYHYEDPYGYTGSEETPPSPQ 61


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +3

Query: 294  TIAPSSTTLLWTSSNDSNKTYNSKVECTAPCKA 392
            T++PS++     +S D   T   K + T PC A
Sbjct: 1298 TVSPSASVPAKIASFDDTFTTTYKEDVTLPCLA 1330


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 545 WTNRCSSSSNSLRPV 501
           W N CS +S S +PV
Sbjct: 179 WNNPCSINSTSSQPV 193


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -3

Query: 633 YALLVVELVGCACLVYIYN 577
           Y + V+  +GC C+  I+N
Sbjct: 44  YTIGVIITIGCLCIWSIFN 62


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = +1

Query: 268 PSGASGFFVPSLPPAPRYYGPA 333
           P  A  FF     P PR Y PA
Sbjct: 304 PEEAETFFRELEAPCPRNYNPA 325


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = +1

Query: 268 PSGASGFFVPSLPPAPRYYGPA 333
           P  A  FF     P PR Y PA
Sbjct: 304 PEEAETFFRELEAPCPRNYNPA 325


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,839
Number of Sequences: 336
Number of extensions: 5219
Number of successful extensions: 26
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21065107
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)