Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0292
(779 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 115 5e-26
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 50 2e-06
SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 5e-06
SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23) 49 5e-06
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 45 6e-05
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 44 1e-04
SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07) 43 3e-04
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_19076| Best HMM Match : HECT (HMM E-Value=0) 41 0.001
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38) 39 0.005
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 38 0.012
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 37 0.016
SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.021
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 36 0.028
SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13) 36 0.028
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 36 0.028
SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.037
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.037
SB_6163| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.064
SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15) 35 0.085
SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28) 35 0.085
SB_43406| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_23824| Best HMM Match : RRM_1 (HMM E-Value=1.9e-19) 34 0.11
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 34 0.15
SB_12447| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.15
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41) 33 0.34
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 32 0.45
SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 32 0.60
SB_33602| Best HMM Match : Amelogenin (HMM E-Value=0.83) 32 0.60
SB_11512| Best HMM Match : E-MAP-115 (HMM E-Value=1.4) 32 0.60
SB_29635| Best HMM Match : E-MAP-115 (HMM E-Value=1.2) 32 0.60
SB_22045| Best HMM Match : Amelogenin (HMM E-Value=0.23) 31 0.79
SB_52275| Best HMM Match : CTF_NFI (HMM E-Value=0.86) 31 1.4
SB_49284| Best HMM Match : zf-C2H2 (HMM E-Value=0) 31 1.4
SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013) 31 1.4
SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15) 31 1.4
SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_30449| Best HMM Match : DUF566 (HMM E-Value=1.2) 30 1.8
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 30 1.8
SB_59647| Best HMM Match : Ank (HMM E-Value=0.00054) 30 2.4
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_34096| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_18296| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11) 30 2.4
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 30 2.4
SB_41245| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_4314| Best HMM Match : 4_1_CTD (HMM E-Value=1.8) 29 3.2
SB_1793| Best HMM Match : RVT_1 (HMM E-Value=0) 29 3.2
SB_59684| Best HMM Match : C1_3 (HMM E-Value=8.3) 29 3.2
SB_29958| Best HMM Match : Pkinase (HMM E-Value=2.6e-08) 29 3.2
SB_28212| Best HMM Match : C1_3 (HMM E-Value=0.59) 29 3.2
SB_52656| Best HMM Match : ABC_tran (HMM E-Value=0) 29 4.2
SB_41261| Best HMM Match : Metallothio_11 (HMM E-Value=0.74) 29 4.2
SB_30182| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0) 29 4.2
SB_28410| Best HMM Match : zf-CCCH (HMM E-Value=7.9e-05) 29 4.2
SB_1031| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 29 5.6
SB_42951| Best HMM Match : I_LWEQ (HMM E-Value=3.8e-10) 29 5.6
SB_24840| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_24012| Best HMM Match : RRM_1 (HMM E-Value=0.69) 29 5.6
SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_59727| Best HMM Match : C2 (HMM E-Value=0.0018) 29 5.6
SB_54606| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_28937| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-08) 29 5.6
SB_22648| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16) 28 7.4
SB_52097| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_46131| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_38839| Best HMM Match : HicB (HMM E-Value=5.7) 28 7.4
SB_20133| Best HMM Match : Extensin_2 (HMM E-Value=2.1) 28 7.4
SB_11259| Best HMM Match : Peptidase_S8 (HMM E-Value=0) 28 7.4
SB_9366| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 28 7.4
SB_45079| Best HMM Match : RRM_1 (HMM E-Value=0.0027) 28 7.4
SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_14241| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_5210| Best HMM Match : Keratin_B2 (HMM E-Value=8) 28 7.4
SB_49607| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35) 28 9.8
SB_40330| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_29302| Best HMM Match : LRR_1 (HMM E-Value=1.1e-11) 28 9.8
SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_53239| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_39021| Best HMM Match : M (HMM E-Value=5.3e-06) 28 9.8
SB_36687| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_33125| Best HMM Match : Pkinase (HMM E-Value=0) 28 9.8
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_11627| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=2.6) 28 9.8
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 115 bits (276), Expect = 5e-26
Identities = 55/69 (79%), Positives = 64/69 (92%), Gaps = 1/69 (1%)
Frame = +2
Query: 2 RKEFAPFGTITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 178
R+EF+P+GTI+SAKVM +D G SKGFGFVCFSSPEEATKAVTEMNGRI+ +KPLYVALAQ
Sbjct: 229 REEFSPYGTISSAKVMKDDKGNSKGFGFVCFSSPEEATKAVTEMNGRILISKPLYVALAQ 288
Query: 179 RKEDRKAHL 205
R+E+RKA L
Sbjct: 289 RREERKAQL 297
Score = 84.6 bits (200), Expect = 8e-17
Identities = 45/72 (62%), Positives = 52/72 (72%), Gaps = 5/72 (6%)
Frame = +3
Query: 579 YKYTPNMRNPPA----PQPAVHIQG-QEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHP 743
YK++ +RNPP P+ I G QEPL ++LAAA QEQKQMLGERLFPLIQ HP
Sbjct: 400 YKFSQTVRNPPPAGQMPEGGQGIPGGQEPLNPSVLAAATPQEQKQMLGERLFPLIQTNHP 459
Query: 744 DLAGKIMGMLLE 779
D+AGKI GMLLE
Sbjct: 460 DMAGKITGMLLE 471
Score = 60.5 bits (140), Expect = 1e-09
Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +2
Query: 14 APFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKED 190
A G I S KVM + +G+SKGFGFV F +PEEA +AV +NG+ +G + L+ A+++ +
Sbjct: 130 AEAGKIVSLKVMTDPEGKSKGFGFVSFETPEEAEEAVNVLNGKEIGGRRLWAGRAKKRAE 189
Query: 191 RKAHL 205
R A +
Sbjct: 190 RAAEV 194
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = +2
Query: 11 FAPFGTITSAKVML--EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 184
F PFGT+ S +++ E RSKG+GFV F E A +A+ +MNG + +PL + +
Sbjct: 262 FEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAMEQMNGFELAGRPLKIGPVTER 321
Query: 185 EDRKAH 202
D A+
Sbjct: 322 GDSSAY 327
>SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 347
Score = 48.8 bits (111), Expect = 5e-06
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +2
Query: 11 FAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 184
F PFGT+ SAKV ++ SK FGFV + + A A+ MNG +G K L V L + K
Sbjct: 282 FQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQHMNGFQIGAKRLKVQLKRPK 341
Query: 185 EDRKAH 202
+ + +
Sbjct: 342 DANRPY 347
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = +2
Query: 11 FAPFGTITSAKVML--EDGRSKGFGFVC 88
F PFGT+ SAKV + + SK FG C
Sbjct: 249 FQPFGTVISAKVFIDKQTNMSKCFGECC 276
>SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23)
Length = 362
Score = 48.8 bits (111), Expect = 5e-06
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +2
Query: 11 FAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 184
F PFGT+ SAKV ++ SK FGFV + + A A+ MNG +G K L V L + K
Sbjct: 297 FQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQHMNGFQIGAKRLKVQLKRPK 356
Query: 185 EDRKAH 202
+ + +
Sbjct: 357 DANRPY 362
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Frame = +2
Query: 2 RKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 175
+K F G +TS K++ + G+S G+ FV + +P++A KAV EMNG + K L V+ A
Sbjct: 44 KKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANKAVREMNGARLQNKTLKVSFA 103
Query: 176 Q 178
+
Sbjct: 104 R 104
Score = 36.7 bits (81), Expect = 0.021
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +2
Query: 5 KEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 136
K F+P+G IT+ ++ L+ KG+GFV S+ EEA A+ +NG
Sbjct: 290 KLFSPYGAITNIELKLD----KGYGFVNMSNYEEACHAICCLNG 329
Score = 35.5 bits (78), Expect = 0.049
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 11 FAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGR 139
F PFG I ++KV+ + G +G GFV F EA A+ ++N +
Sbjct: 133 FKPFGKIITSKVLKDVSGEGRGTGFVRFDKRCEAQTAIDDLNNK 176
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 45.2 bits (102), Expect = 6e-05
Identities = 22/49 (44%), Positives = 30/49 (61%)
Frame = +2
Query: 53 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRKA 199
E GR +GFGFV F S EE KA+ E +G+ +P+ V AQ + +R A
Sbjct: 40 ETGRPRGFGFVTFGSKEEMEKAIDEFDGQDFDGRPMKVNQAQPRGERGA 88
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Frame = +2
Query: 11 FAPFGTITSAKVMLED---GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQR 181
F+ FG I ++ D G SKGF F+ F+S + + A+ MNG+ + +P+ V+ A +
Sbjct: 120 FSAFGVILQTPKIMRDSDTGNSKGFAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFK 179
Query: 182 KEDR 193
KE +
Sbjct: 180 KESK 183
>SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07)
Length = 252
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +2
Query: 53 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKED 190
E GR +GFGFV F S EE KA+ E +G+ + +P+ V A+ + D
Sbjct: 132 ETGRPRGFGFVTFGSKEEMEKAIDEFDGQDLDGRPMKVNEAKPRGD 177
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +2
Query: 53 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRK 196
E GRS+GFGFV S ++ A+ +MN VG + + VALA K + +
Sbjct: 44 ESGRSRGFGFVLLQSADQIAPAIEKMNQSSVGGRNITVALALDKTENR 91
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +2
Query: 29 ITSAKVML--EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDR 193
+ S KV+ E GR +GFGFV F S +E KA+ + +G + +P+ V AQ + +R
Sbjct: 35 LLSVKVITDRETGRPRGFGFVTFGSEDEMDKAIDKFDGEDLDGRPMKVNKAQPRGER 91
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 41.9 bits (94), Expect = 6e-04
Identities = 18/39 (46%), Positives = 28/39 (71%)
Frame = +2
Query: 53 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVA 169
++ RS+GFGFV F++PE+A AV +NG+ V + L +A
Sbjct: 94 QEPRSRGFGFVTFANPEDAQTAVKSLNGKEVQGRTLKIA 132
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Frame = +2
Query: 2 RKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 175
R F ++ + K++ G S GFGFV +++ E+A KA+ ++NG +G K L VA +
Sbjct: 64 RMMFEAVASLNNCKIVRHKPSGWSYGFGFVDYNTTEDAQKAIDKLNGFTIGNKVLKVAFS 123
Query: 176 Q 178
+
Sbjct: 124 R 124
Score = 32.7 bits (71), Expect = 0.34
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +2
Query: 11 FAPFGTITSAKVMLEDGRS--KGFGFVCFSSPEEATKAVTEMNGRIVGTKPL 160
F G + +M + R KGF FV ++ EEA A+ +NG + KPL
Sbjct: 295 FGQCGIVNKVDIMWDWQRQQCKGFCFVTMATQEEAQNAIQTLNGFMYTNKPL 346
>SB_19076| Best HMM Match : HECT (HMM E-Value=0)
Length = 2018
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = +3
Query: 678 PLQEQKQMLGERLFPLIQRMHPDLAGKIMGMLLE 779
PL +Q LGERL+P + + P LA +I GMLLE
Sbjct: 1644 PLPYHRQSLGERLYPRVHALKPALASRITGMLLE 1677
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +2
Query: 62 RSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKED 190
+SKGFGFV F E+A KA+ EM+ +G K + A RK +
Sbjct: 552 KSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQVKTNWAARKNN 594
>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
Length = 496
Score = 38.7 bits (86), Expect = 0.005
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 11 FAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAV 121
F+ +GTI +M DGRS+GFGFV + S + + +
Sbjct: 70 FSQWGTIVDCVIMKRDGRSRGFGFVTYESSDSVNEVL 106
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 38.3 bits (85), Expect = 0.007
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = +2
Query: 11 FAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKED 190
F G + +V+ ++GRS+GFG+ F+S E+ KA+ E+NG + + + A K
Sbjct: 200 FEEKGLSATCRVITQEGRSRGFGYADFTSKEDYNKAL-ELNGEDCCGREIRINPANSKPS 258
Query: 191 R 193
R
Sbjct: 259 R 259
Score = 35.9 bits (79), Expect = 0.037
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +2
Query: 14 APFGTITSAKVML--EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKE 187
A F ++AKV+ E G S+GFGFV + E A K ++EM G V + + + A +
Sbjct: 307 AAFEGCSNAKVIFDRESGESRGFGFVDYDDVETAKKVLSEMAGAEVDGRQVRLDFASPRT 366
Query: 188 D 190
+
Sbjct: 367 E 367
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 37.5 bits (83), Expect = 0.012
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +2
Query: 5 KEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMN 133
+ FA + + AK++ + +SKG+GFV F P + KA+ EMN
Sbjct: 235 RAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDPNDFIKAMREMN 279
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 37.1 bits (82), Expect = 0.016
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Frame = +2
Query: 2 RKEFAPFGTITSAKVMLED----GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVA 169
++ F+ FG ++ A V + R GFGFV F++ +A KA+ EMN + + +P+ V
Sbjct: 264 KETFSAFGEVSEASVPQKKVGRRNRKMGFGFVQFTNVFDAAKALEEMNAKKILGRPVAVD 323
Query: 170 LAQRK 184
A K
Sbjct: 324 WAVPK 328
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = +2
Query: 62 RSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRK 196
R +GFG+V F+ E+A KA + N + + +P+++ +++K K
Sbjct: 60 RCRGFGYVTFALEEDALKA--KDNIKSIKGRPIHLDFSEKKARTK 102
>SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 650
Score = 36.7 bits (81), Expect = 0.021
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +1
Query: 295 PSLPPAPRYYGPAQMTQIRPTTPRWNAQPPVRPS-TQAASAYANMQPTYRP-APRAPAQS 468
PS PP P Y P Q P P PP +PS S+Y QP+Y P AP A +
Sbjct: 514 PSYPPTPSSYLPTQ-----PYYPPPQPYPPTQPSYPPTPSSYPPTQPSYPPTAPFLSADT 568
Query: 469 TIRTS 483
T+ +S
Sbjct: 569 TLLSS 573
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +1
Query: 295 PSLPPAPRYYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAP 450
PS PP +Y P Q P TP ++ PP +PS Y P+Y P P
Sbjct: 170 PSYPPTQPFYPPTQ--PFYPPTP--SSYPPTQPS------YPPTAPSYPPTP 211
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 36.3 bits (80), Expect = 0.028
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 11 FAPFGTITSAKVMLEDGRSK--GFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 178
F PFG IT ++ ++ SK GFGFV F E+ A+ MN + + + V LA+
Sbjct: 25 FIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAEDTAAAIDNMNESELFGRTIRVNLAK 82
>SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13)
Length = 260
Score = 36.3 bits (80), Expect = 0.028
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +2
Query: 62 RSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 184
R +GFGFV F++ EA KA ++NG IV + + V+L +
Sbjct: 122 RIEGFGFVTFNTAAEANKAREKLNGTIVDGRKVEVSLCMEQ 162
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 36.3 bits (80), Expect = 0.028
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +2
Query: 2 RKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 166
R F PFG I + + + + KGF FV + PE A A+ +MNG ++G + + V
Sbjct: 119 RTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEAAQLALEQMNGVLLGGRNIKV 175
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 11 FAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMN 133
F FG + + E G+ KG+GF+ + + + A A+ MN
Sbjct: 219 FEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAIASMN 261
>SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1850
Score = 35.9 bits (79), Expect = 0.037
Identities = 23/61 (37%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = +1
Query: 295 PSLPPAPRYYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAY---ANMQPTYRPAPRAPAQ 465
PS PA Y A + AQ PV P+ A+AY A + PT PA PAQ
Sbjct: 1305 PSAAPATAYPTQAPANPTAAPATAYPAQAPVNPTAAPATAYPAQAPVNPTAAPATAYPAQ 1364
Query: 466 S 468
S
Sbjct: 1365 S 1365
Score = 34.7 bits (76), Expect = 0.085
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = +1
Query: 295 PSLPPAPRYYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAY---ANMQPTYRPAPRAPAQ 465
P+ PA Y A + + AQ PV P+ A+AY + PT PA PAQ
Sbjct: 1321 PTAAPATAYPAQAPVNPTAAPATAYPAQAPVNPTAAPATAYPAQSPFNPTAAPATAYPAQ 1380
Query: 466 STIRTSLG 489
+ + G
Sbjct: 1381 APANPTAG 1388
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = +1
Query: 295 PSLPPAPRYYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAY---ANMQPTYRPAPRAPAQ 465
PS PAP A + T + Q P P+ A+AY A + PT PA PAQ
Sbjct: 1291 PSAAPAPAPAAQAYPSAAPATA--YPTQAPANPTAAPATAYPAQAPVNPTAAPATAYPAQ 1348
Query: 466 STIRTSLGARPIT 504
+ + + A P T
Sbjct: 1349 APVNPT--AAPAT 1359
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 35.9 bits (79), Expect = 0.037
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +2
Query: 11 FAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVA 169
F+ G +T A+V + +G S+GF FV +++ EEA K NGR V + VA
Sbjct: 226 FSQTGNVTFAQVAINPANGGSRGFAFVDYATAEEAEKGQRAHNGRQVEGSNIRVA 280
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Frame = +2
Query: 14 APFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEM---NGRIVGTKPLYVALAQ 178
+P+G I ++ + G SKG+GFV +++ E A +A ++ + +G + L VA A+
Sbjct: 134 SPYGNIERLFLVRSEVTGDSKGYGFVEYATRENAMQAKQQLLNTASKYIGGRILRVAFAE 193
>SB_6163| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 35.1 bits (77), Expect = 0.064
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +3
Query: 687 EQKQMLGERLFPLIQRMHPDLAGKIMGMLLE 779
EQK+ +GE++ I+++HP A I GMLLE
Sbjct: 288 EQKEFIGEKIHDEIRKLHPGHADVITGMLLE 318
Score = 34.3 bits (75), Expect = 0.11
Identities = 13/28 (46%), Positives = 22/28 (78%)
Frame = +3
Query: 696 QMLGERLFPLIQRMHPDLAGKIMGMLLE 779
Q LG+R++ +Q+++P LA ++ GMLLE
Sbjct: 79 QSLGDRVYGTVQQLYPTLAERVTGMLLE 106
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 684 QEQKQMLGERLFPLIQRMHPDLAGKIMGMLLE 779
++ K ++GE ++ + +P A KI GMLLE
Sbjct: 174 EDLKSIIGENIYSQLVEKYPKDADKITGMLLE 205
>SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15)
Length = 145
Score = 34.7 bits (76), Expect = 0.085
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +2
Query: 11 FAPFGTITSAKVM-LEDGRSKGFGFVCFSSPEEATKAV 121
F P+G I ++ + G+SKGFG+V + + E A +A+
Sbjct: 83 FGPYGAIEDLSIIRTQTGKSKGFGYVTYENAESAQRAL 120
>SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28)
Length = 419
Score = 34.7 bits (76), Expect = 0.085
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +2
Query: 20 FGTITSAKVMLEDGRS--KGFGFVCFSSPEEATKAVTEM 130
+GTI S K +L+ + KG+GFV F SP A KAV +
Sbjct: 123 YGTIISTKAILDKDTNLCKGYGFVDFESPISAQKAVAAL 161
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/46 (26%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 11 FAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIV 145
F+ +G + S +++ + D SKG GF S E+ + + + N +++
Sbjct: 199 FSKYGKVISTRILRDKDTNSKGVGFARMESAEKCEQVIKDFNKKML 244
>SB_43406| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 576
Score = 34.3 bits (75), Expect = 0.11
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = +2
Query: 2 RKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQR 181
++EF G + +V E RS+GF V F + E A KA+ EMNG V + V++A+R
Sbjct: 125 KEEFNHLGHVE--RVNFEKNRSQGF--VTFDTWEAADKAIDEMNGLKVQHVHIRVSMARR 180
Query: 182 K 184
+
Sbjct: 181 Q 181
>SB_23824| Best HMM Match : RRM_1 (HMM E-Value=1.9e-19)
Length = 623
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 71 GFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKED 190
G GFV F PE A KA E++G + + L++ A+ K++
Sbjct: 283 GIGFVTFLMPEHAVKAFNELDGTVFQGRLLHILPAKAKKE 322
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 33.9 bits (74), Expect = 0.15
Identities = 21/61 (34%), Positives = 26/61 (42%)
Frame = +1
Query: 268 PSGASGFFVPSLPPAPRYYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPA 447
P F+PS PP P + PA PT P + PP P+ A N P+ PA
Sbjct: 297 PPAPPNLFIPSAPPNP-HIPPAPPNPYIPTAPPNPSIPPAPPNPSIPPAPPN--PSIPPA 353
Query: 448 P 450
P
Sbjct: 354 P 354
>SB_12447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 326
Score = 33.9 bits (74), Expect = 0.15
Identities = 14/38 (36%), Positives = 26/38 (68%)
Frame = +2
Query: 47 MLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPL 160
++++GR KG FV S E+A +A+ E++G ++ KP+
Sbjct: 285 LMKEGRMKGQAFVTLPSEEKAKRALREVHGYMLHGKPI 322
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 33.5 bits (73), Expect = 0.20
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +2
Query: 2 RKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 175
++ F FG I +V L+ RS+GFGFV F E+A K V + RI G + V L
Sbjct: 132 KEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKDEDA-KNVLSTSHRIQG-RLCEVRLP 189
Query: 176 QRKED 190
+ KE+
Sbjct: 190 RPKEE 194
>SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41)
Length = 638
Score = 32.7 bits (71), Expect = 0.34
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +1
Query: 295 PSLPPAPRYYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAPA 462
P LP +P PA + P P+ + PP+R + ++S A T PR PA
Sbjct: 481 PELPGSPGDSPPATSPKQPPLPPKHSNGPPLRQTPMSSSLSATPVSTPDTTPRTPA 536
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 32.3 bits (70), Expect = 0.45
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Frame = +3
Query: 309 STTLLWTSSNDSNKTYNSKVECT---APCKA*HTSSICICKYATHLQTSTESSGPIYNKN 479
+TT TS+ ++ K+ +K T + KA TSS K T L TST + + +
Sbjct: 439 ATTSQSTSTTEATKSQTTKATTTLSTSTTKATTTSSTSTTKATTTLSTSTTKATTTPSTS 498
Query: 480 IVRCKTHNWTQGVAAAAASIRPPLVSQSSRPAN 578
+ T + + AA+ P + SR N
Sbjct: 499 TTKATTSTAVEATTSPAATETAPPTTTESRSTN 531
>SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2848
Score = 32.3 bits (70), Expect = 0.45
Identities = 25/79 (31%), Positives = 28/79 (35%)
Frame = +1
Query: 271 SGASGFFVPSLPPAPRYYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAP 450
S S F PPA R + Q PTT R A ST SA P+
Sbjct: 974 SSVSVDFKSKEPPASRIPVLSSKPQASPTTDRRAASSSSNHSTPVNSAPPTPTKNATPSK 1033
Query: 451 RAPAQSTIRTSLGARPITG 507
P QST T + P G
Sbjct: 1034 GTPGQSTSGTPVNGTPCKG 1052
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 31.9 bits (69), Expect = 0.60
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +2
Query: 11 FAPFGTITSAKVML--EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 184
F+ G + S +++ E G+ KG+GF + E A A+ +NG + + L V A +
Sbjct: 45 FSEVGPVISFRLVFDRETGKPKGYGFCEYKDQETALSAMRNLNGYELNGRALRVDSAASE 104
Query: 185 EDRK 196
++++
Sbjct: 105 KNKE 108
>SB_33602| Best HMM Match : Amelogenin (HMM E-Value=0.83)
Length = 242
Score = 31.9 bits (69), Expect = 0.60
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +1
Query: 295 PSLPPAPRYYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAP 459
P+ P P ++GP + RPT P + P+ P +A P P PR+P
Sbjct: 33 PTTPSPPSHHGPISLRPHRPTIP--SPHDPITPRPHRPTAPRPHDP-IAPRPRSP 84
>SB_11512| Best HMM Match : E-MAP-115 (HMM E-Value=1.4)
Length = 639
Score = 31.9 bits (69), Expect = 0.60
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 522 AAAASIRPPLVSQSSRPANYKYTP-NMRNPPAPQPAVHIQGQEPLT 656
A S RPP S S RPA + P ++R+PP P+P +P+T
Sbjct: 569 ATPRSARPP--SDSPRPARPQPEPRHLRSPPEPKPRHRDSSHDPVT 612
>SB_29635| Best HMM Match : E-MAP-115 (HMM E-Value=1.2)
Length = 2658
Score = 31.9 bits (69), Expect = 0.60
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 522 AAAASIRPPLVSQSSRPANYKYTP-NMRNPPAPQPAVHIQGQEPLT 656
A S RPP S S RPA + P ++R+PP P+P +P+T
Sbjct: 2588 ATPRSARPP--SDSPRPARPQPEPRHLRSPPEPKPRHRDSSHDPVT 2631
>SB_22045| Best HMM Match : Amelogenin (HMM E-Value=0.23)
Length = 149
Score = 31.5 bits (68), Expect = 0.79
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 555 SQSSRPANYKYTPNMRNPPAPQPAVHIQGQEPLTSTMLAAAPLQEQ 692
+QS P N++YTP P +P P H P+TST + P Q
Sbjct: 53 AQSPAPPNHQYTPITSAPQSPVPPNH--QCRPITSTPQSPVPPNHQ 96
>SB_52275| Best HMM Match : CTF_NFI (HMM E-Value=0.86)
Length = 809
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +3
Query: 543 PPLVSQSSRPAN-YKY---TPNMRNPPAPQPAVHIQGQEPLTSTMLAAAPLQEQKQ 698
P ++ PA Y Y TPNM P + Q +H+QGQ+ + +TM A +Q Q+Q
Sbjct: 641 PSMIEGQGGPAQGYAYNSRTPNMTAPQSNQ-ILHLQGQQRVNATM-ATPGVQIQQQ 694
>SB_49284| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1041
Score = 30.7 bits (66), Expect = 1.4
Identities = 29/91 (31%), Positives = 35/91 (38%), Gaps = 8/91 (8%)
Frame = +1
Query: 250 NGQIFQPSGASGFFVPSLPPAPRYYGPAQMTQIR-PTTPRWNAQPPVRP-----STQAAS 411
NGQ Q P P P+Y+ PAQ Q + P R + PP RP Q A
Sbjct: 523 NGQYQQQQAYQAARSPPAPGQPQYH-PAQQIQYQNPGNYRVHRGPPQRPPPLPSQPQLAE 581
Query: 412 AYANMQPTY--RPAPRAPAQSTIRTSLGARP 498
A P+Y A R P +S G P
Sbjct: 582 KPALQSPSYPQESASRLPTPHYSHSSHGQEP 612
>SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013)
Length = 665
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +2
Query: 62 RSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKE 187
R +GFGFV F S A KA + ++ K + V AQ KE
Sbjct: 10 RHRGFGFVTFESENSADKA-CDTQYHLINNKKVEVKKAQPKE 50
>SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15)
Length = 876
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 74 FGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKED 190
FGFV F + + A +AV + +GRI+ K + V + + D
Sbjct: 82 FGFVQFETEKGADEAVAKEHGRIINGKKIDVRIVNSRAD 120
>SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1894
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 QIFQPSGASGF-FVPSLPPAPRYYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQP 432
Q F+P F P P + P Q +Q +P P Q P RP Q + ++QP
Sbjct: 468 QAFRPEQQPQLPFQPGQSPQQPFL-PDQQSQ-KPFRPEQQPQQPFRPGQQPQQPFRSVQP 525
Query: 433 TYRPAPRAPAQSTIRTSLGARP 498
+P RA Q+ G +P
Sbjct: 526 PQQPF-RADQQTQQPFQSGQQP 546
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 322 YGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRP 444
+ P Q Q +P+ P Q P RP Q + ++QP +P
Sbjct: 580 FRPGQQPQ-QPSRPGQQHQQPFRPEQQPQQPFRSVQPPQQP 619
>SB_30449| Best HMM Match : DUF566 (HMM E-Value=1.2)
Length = 415
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +1
Query: 355 TTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAPAQSTIRTS 483
TT +++PP P T A +++N Q + AP APAQ R+S
Sbjct: 151 TTTSQDSRPPSYPETGARVSHSNEQ-VWPLAPTAPAQQDPRSS 192
>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
Length = 291
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 2 RKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVG 148
RK FA FG I A V+ + +SKG+GFV ++ + A A I G
Sbjct: 27 RKFFAQFGEIREAVVIKDRVTKKSKGYGFVTMATSDAAELACKNKRPMIEG 77
>SB_59647| Best HMM Match : Ank (HMM E-Value=0.00054)
Length = 305
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -3
Query: 168 ATYNGLVPTIRPFISVTALVASSGEEKQTNPKPLLRPSSSITFADVIVPNGANS 7
A YNG +P ++ I + S +EK + P + + +V NGAN+
Sbjct: 30 AAYNGDLPQLKMLIETGVVSISERDEKGSTPAHKAAGNGHVQVLQWLVENGANN 83
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 11 FAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGR 139
F G I ++M++ G +KGF F FS+ +EA AV +++ +
Sbjct: 172 FEECGHIYDFRLMIDPISGLTKGFAFCTFSNKDEAQNAVKKLDNK 216
>SB_34096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1430
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/46 (23%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = -3
Query: 345 LSHLSWSIVTWCWRERWYKKSTCTTRLEYLAICCMRI---LAILCM 217
+ H + ++ +CWR+++Y L A+ C R+ ++ LC+
Sbjct: 597 VDHSDYPLLGYCWRDQYYLDVVLPMGLRSAAVACQRVTSAVSYLCL 642
>SB_18296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +1
Query: 310 APRYYGPAQMTQIRPTTPRWN-AQPPVRPSTQAASAYANMQPTYRP 444
+PR Y P +T +PR + PP RP T SA +P +P
Sbjct: 613 SPRLYTPKSITPKFILSPRQTLSAPPSRPKTAPTSAQRTPEPIRKP 658
>SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11)
Length = 67
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +2
Query: 2 RKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGR 139
+K F +G +++L+DG +GFV F ++A AV E NG+
Sbjct: 20 KKFFYTYGRFKIREIILKDG----YGFVEFDYSDDAEDAVYECNGK 61
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Frame = +2
Query: 2 RKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEA----TKAVTEMNGR--IVGTKP 157
R+ F FG + VM + RS+GFGF+ F P+ E++G+ + TK
Sbjct: 125 RQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNSGAQELDGKKMVTTTKK 184
Query: 158 LYV 166
+++
Sbjct: 185 IFI 187
>SB_41245| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = -2
Query: 511 CVQLWVLHLTMFLL*IGPEL---SVLVCKWVAYLHMQMLLV 398
C+ LWV +L + + + + S VC WV YL+M M+ V
Sbjct: 151 CICLWVQYLCLSMGAVPVYVYGCSTCVCLWVQYLYMSMVAV 191
>SB_4314| Best HMM Match : 4_1_CTD (HMM E-Value=1.8)
Length = 922
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +1
Query: 376 QPPVRPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARPITGRK 513
+PP TQA +A T P PR+P +S+ RP +GRK
Sbjct: 751 RPPSSQKTQANTASQASVDTASPLPRSPKRSSPILPPINRPASGRK 796
>SB_1793| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 864
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -3
Query: 360 SCRSYLSHLSWSIVTWCWRERWYKKSTCTTRLEYL 256
S + L ++SI W W R+Y ST T R+ Y+
Sbjct: 787 SAATSLDTKTFSIEYWRWHHRFYSGSTATIRIFYV 821
>SB_59684| Best HMM Match : C1_3 (HMM E-Value=8.3)
Length = 138
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/56 (30%), Positives = 23/56 (41%)
Frame = -3
Query: 498 GSCT*RCSYCRLGRSSRCWSVSGLHICICRCCLCARPYRGLCIPPWSCRSYLSHLS 331
G C RC CR+ R C + + C+ RC C C+ + C HLS
Sbjct: 53 GCCVMRCVACRVMRCVACCVMRCVACCVMRCVDC-------CVVTFCCYPSGRHLS 101
>SB_29958| Best HMM Match : Pkinase (HMM E-Value=2.6e-08)
Length = 857
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -3
Query: 624 LVVELVGCACLVYIYNWLGDCFE 556
L+ +L GC ++ +YNWL +C+E
Sbjct: 561 LLNQLQGCDHIIKLYNWLRNCWE 583
>SB_28212| Best HMM Match : C1_3 (HMM E-Value=0.59)
Length = 218
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/56 (30%), Positives = 23/56 (41%)
Frame = -3
Query: 498 GSCT*RCSYCRLGRSSRCWSVSGLHICICRCCLCARPYRGLCIPPWSCRSYLSHLS 331
G C RC CR+ R C + + C+ RC C C+ + C HLS
Sbjct: 133 GCCVMRCVACRVMRCVACCVMRCVACCVMRCVDC-------CVVTFCCYPSGRHLS 181
>SB_52656| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1321
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3
Query: 537 IRPPLVSQSSRPANYKYTPNMRNPPAPQPAVHIQGQE 647
+ PP+ SQ P + P M + P P P +Q +E
Sbjct: 968 VNPPMSSQPQPPPGNQVNPPMSSQPQPPPGNQVQLKE 1004
>SB_41261| Best HMM Match : Metallothio_11 (HMM E-Value=0.74)
Length = 328
Score = 29.1 bits (62), Expect = 4.2
Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Frame = -3
Query: 450 RCWSVSGLHICICRCCLCAR--PYRGLCIPPWSCRSYLSHLSWSIVTWCWRERWYKKSTC 277
RC SV C C C CA + LC P WS L S++ CW++ + S
Sbjct: 231 RC-SVCTCCPCDCTCLQCAPCIVFSALCCPFWSL-----CLLCSMINSCWKQPFQSTSAL 284
Query: 276 TTRLEYLAIC 247
R+ C
Sbjct: 285 VLRMASSCQC 294
>SB_30182| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +2
Query: 515 SCCCC-CIYSSTFSISKQSPSQL*IYTKHAQPTSSTTSSAYPRTRTSDLYYACSSTTPG 688
+CCCC C +S I S + H+ + T S + R + +YACS G
Sbjct: 279 TCCCCECCHSDKKCIQWFSEKICGTFPSHSTANAFFTKSLF-RAYHREGFYACSKADAG 336
>SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0)
Length = 1467
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = +1
Query: 268 PSGASGFFVPSLP---PAPRYYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTY 438
P+ AS + PS P P+ PA + PT+P ++ P + A+ +Y+ P+Y
Sbjct: 405 PAAASPGYSPSSPAFMPSSPSMSPASPSY-SPTSPGYSPSSPSSGYSPASPSYSPTSPSY 463
Query: 439 RP 444
P
Sbjct: 464 SP 465
>SB_28410| Best HMM Match : zf-CCCH (HMM E-Value=7.9e-05)
Length = 905
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 268 PSGASGFFVPSLPPAPRYYGPAQMTQIRPTTPRWNAQPPV 387
P+G +P +PP P Y P P P+++ +PPV
Sbjct: 376 PTGVPPQMLPMMPPRPTVYHPPADDTYNPEQPQFD-RPPV 414
>SB_1031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1933
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -3
Query: 432 GLHICICRCCLCARPYRGLCIPPWSCRSYLSHLSW 328
GL +C L A P W R+Y SH+SW
Sbjct: 1366 GLQLCAFEIGLFALGLHNRTSPNWLSRTYSSHVSW 1400
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +2
Query: 2 RKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTK 154
R+ F G + S +++ + G KGFG+V F S + A+ N G K
Sbjct: 73 RELFTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVFALKMNNAEFKGRK 125
>SB_42951| Best HMM Match : I_LWEQ (HMM E-Value=3.8e-10)
Length = 232
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/67 (19%), Positives = 35/67 (52%)
Frame = +3
Query: 339 DSNKTYNSKVECTAPCKA*HTSSICICKYATHLQTSTESSGPIYNKNIVRCKTHNWTQGV 518
+++ + N + + KA +++ + K A+ Q ++G I++ + + W+QG+
Sbjct: 1 EADDSLNFEEQILEAAKAITAATVALVKSASAAQRELIATGKIFSAGTDAREDNQWSQGL 60
Query: 519 AAAAASI 539
+AA ++
Sbjct: 61 VSAARTV 67
>SB_24840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 328
Score = 28.7 bits (61), Expect = 5.6
Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Frame = -3
Query: 450 RCWSVSGLHICICRCCLCAR--PYRGLCIPPWSCRSYLSHLSWSIVTWCWRERWYKKSTC 277
RC SV C C C CA + LC P WS L S++ CW++ + S
Sbjct: 231 RC-SVCTCCPCDCPCLQCAPCIVFSALCCPFWSL-----CLLCSMINSCWKQPFQSTSAL 284
Query: 276 TTRLEYLAIC 247
R+ C
Sbjct: 285 VLRMASSCQC 294
>SB_24012| Best HMM Match : RRM_1 (HMM E-Value=0.69)
Length = 166
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2
Query: 50 LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTK 154
L+ GRSK +GFV F E KA+ I G K
Sbjct: 97 LKSGRSKKYGFVFFKDEEACEKAMGNQPHFIEGQK 131
>SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2834
Score = 28.7 bits (61), Expect = 5.6
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +1
Query: 331 AQMTQIRPT-TPRWNAQPPVRPSTQAA-SAYANMQPTYRPAPRAPAQSTIRTSLGARP 498
A TQ P+ TP P V PSTQAA SA ++ Q AP ++ S A P
Sbjct: 1917 ASSTQAAPSVTPSTLMTPSVTPSTQAAPSAASSTQVAPSMAPSTQTGHSVTPSTQAGP 1974
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 20 FGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 166
+G I + ++ + G+ KGF F+C+ AV NG +G + + V
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRSTILAVDNFNGIKLGGRTIRV 52
>SB_59727| Best HMM Match : C2 (HMM E-Value=0.0018)
Length = 482
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = +1
Query: 304 PPAPRYYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAPAQS 468
PP+P++Y P Q P A P V A + N PT +P A S
Sbjct: 15 PPSPKHYTPTQPINQVPPPALTTAIPTVAAYQAAHPSAINASPTTVGSPSTTAPS 69
>SB_54606| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 3/23 (13%)
Frame = -3
Query: 420 CICRC---CLCARPYRGLCIPPW 361
C+CRC CLCA Y + +PP+
Sbjct: 16 CLCRCLCRCLCADVYVPMSMPPY 38
>SB_28937| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-08)
Length = 1258
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +1
Query: 301 LPPAPRYYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAPA 462
LP P P T I P++ + N+ PP PSTQ S + T P+ + P+
Sbjct: 248 LPSTP---APINPTPINPSSYQPNSHPPQLPSTQLPS--TQLPSTQLPSTQLPS 296
>SB_22648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 608 TSSTTSSAYPRTRTSDLYYACSSTTPGTETDAWGTTVSTYSEN 736
TS+TTS+ T TS +STT + T + TT TY +
Sbjct: 52 TSTTTSTTTSTTNTSTTTSTTTSTTNTSTTTSTTTTTITYKRD 94
>SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16)
Length = 76
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 68 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDR 193
+ +GFV F+ E A +A+ +NG + L V+LA + R
Sbjct: 35 RDYGFVYFAKRESAVQAIDGINGAYIDGCKLEVSLAIPQSSR 76
>SB_52097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 945
Score = 28.3 bits (60), Expect = 7.4
Identities = 24/86 (27%), Positives = 34/86 (39%)
Frame = +1
Query: 250 NGQIFQPSGASGFFVPSLPPAPRYYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQ 429
NG + +P+ SG P R+ GP + P +A P + P A +
Sbjct: 368 NGSVARPAMTSGVIPGVQTPVVRFQGPVASGPVTVVRPS-SANPQIAPRP------AVIA 420
Query: 430 PTYRPAPRAPAQSTIRTSLGARPITG 507
P P PR A ST T + P+ G
Sbjct: 421 PGPAP-PRLIAPSTTATLVKKEPMPG 445
>SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 608 TSSTTSSAYPRTRTSDLYYACSSTTPGTETDAWGTTVST 724
TS TTS++ P T T +++ P T T G+T +T
Sbjct: 12 TSITTSTSTPSTSTPRAGSTTNTSAPSTSTPRTGSTTTT 50
>SB_46131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 899
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 53 EDGRSKGFGFVCFSSPEEATKAVTEMNGRI 142
E+G++ G GFV F+SPE A +A+ + +I
Sbjct: 74 EEGKTTGEGFVEFASPEIAGQAMQKHKEKI 103
>SB_38839| Best HMM Match : HicB (HMM E-Value=5.7)
Length = 268
Score = 28.3 bits (60), Expect = 7.4
Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 5/78 (6%)
Frame = +1
Query: 388 RPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGAR-----PITGRKEXXXXXXXXXXXX 552
RPS AAS N R A R+ A ++RT AR PI G K
Sbjct: 21 RPSLVAASPVVNEVSAVRCASRSHAMRSMRTRRRARHWDRLPIAGVKRDKGRRLVVPRPA 80
Query: 553 XXKAVAQPIINIHQTCAT 606
Q I+N++ TC T
Sbjct: 81 IGGRTRQGIVNVN-TCLT 97
>SB_20133| Best HMM Match : Extensin_2 (HMM E-Value=2.1)
Length = 762
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 123 VTALVASSGEEKQTNPKPLLRPSSSITFADVI 28
++ + +S KQT PK L+RP S D I
Sbjct: 651 ISGIPSSRSSRKQTEPKKLVRPESEYELEDEI 682
>SB_11259| Best HMM Match : Peptidase_S8 (HMM E-Value=0)
Length = 772
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +3
Query: 552 VSQSSRPANYKYTPNMRNPPAPQPAVHIQGQEPLTSTMLAAAPLQEQKQM 701
V + P + YTP+MR PP A +P T +P +E ++M
Sbjct: 603 VQRKPYPCSPSYTPSMRAPPGTPEAT--TPSDPPPDTKRYISPTEESRRM 650
>SB_9366| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1221
Score = 28.3 bits (60), Expect = 7.4
Identities = 28/122 (22%), Positives = 59/122 (48%), Gaps = 8/122 (6%)
Frame = +3
Query: 429 THLQTSTESSGPIYNKNIVRCKTHNWTQGVAAAAASIRPPLVSQSSR--PANYKYTPNMR 602
T LQ T S P+ K+ R + + A+ S++ P+ Q+++ P + + +P+
Sbjct: 382 TGLQNHTPSKPPMPAKSPGRHSGQS-SPRQASPPQSVKSPIHFQANKSPPFHPQRSPSAS 440
Query: 603 NPPA-PQPAVHIQG-----QEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKIM 764
P + P P +Q ++ + L AAP + ++ ++L L +++ P A ++M
Sbjct: 441 KPSSRPPPLSSVQNPSKQDKKVIPPASLNAAPTEPLEKSSMQKLQELGKKLTPSFAKELM 500
Query: 765 GM 770
G+
Sbjct: 501 GI 502
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +2
Query: 11 FAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNG 136
F+ +G + + + + + S+GF +V + PEE KA+ M+G
Sbjct: 1177 FSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKALKHMDG 1220
>SB_45079| Best HMM Match : RRM_1 (HMM E-Value=0.0027)
Length = 253
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 80 FVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEDRK 196
+V F E+A KAV ++N R +P+Y L+ + R+
Sbjct: 116 YVKFRYEEDAEKAVNDLNNRWYNGQPIYAELSPVTDFRR 154
>SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1929
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = +1
Query: 325 GPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPT 435
G TQ+R TT QPP PS QA A PT
Sbjct: 1151 GNEHSTQVRNTTQAKPPQPPPVPSVQAPPAPPPAPPT 1187
>SB_14241| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 280
Score = 28.3 bits (60), Expect = 7.4
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +1
Query: 298 SLPPAPRYYGPAQMTQIR-PTTPRWNAQPPVRPST--QAASAYANMQPTYRPAPRAP 459
SL APRYYG +T +PR+ QP + ++ QA Y + T P R P
Sbjct: 41 SLLQAPRYYGQPVITDTSLLRSPRYYGQPAITDTSLLQAPRYYEHPVITDSPLLRTP 97
>SB_5210| Best HMM Match : Keratin_B2 (HMM E-Value=8)
Length = 139
Score = 28.3 bits (60), Expect = 7.4
Identities = 23/90 (25%), Positives = 37/90 (41%)
Frame = +3
Query: 417 CKYATHLQTSTESSGPIYNKNIVRCKTHNWTQGVAAAAASIRPPLVSQSSRPANYKYTPN 596
CK+ T ST+ P+ NI CK T A++ P+ + + P + + +
Sbjct: 55 CKHPTSTHASTQHQ-PMQAPNINPCKHPTSTH-----ASTQHQPMQAPNINPCKHPTSTH 108
Query: 597 MRNPPAPQPAVHIQGQEPLTSTMLAAAPLQ 686
P A +I + TST L P+Q
Sbjct: 109 ASTQHQPMQAPNINPCKHPTSTQLFGLPVQ 138
>SB_49607| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4538
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 632 YPRTRTSDLYYACSSTTPGTETDAWGTTVSTYSENAP*F 748
YPR R D Y+ C T TD + S+ + +P F
Sbjct: 2522 YPRIRDLDFYWFCYKKTRNVTTDIDALSASSPLQQSPEF 2560
>SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35)
Length = 929
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +2
Query: 68 KGFGFVCFSSPEEATKAVTEMNGR-IVGTK 154
+G+GFV F +A AV ++NGR ++G +
Sbjct: 722 RGYGFVEFDDHRDAEDAVHDLNGRDLIGER 751
>SB_40330| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 153
Score = 27.9 bits (59), Expect = 9.8
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +2
Query: 536 YSSTFSISKQSPSQL*IYTKHAQPTSSTTSSAYPRTRTSDLYYACSSTTPGTETDAWGTT 715
Y+ST S + +PS T + TS T++S+Y T + + +STT T T ++ +T
Sbjct: 14 YTSTTSYTS-TPSYT-STTSYTSTTSYTSTSSYTSTTSYTSTTSYTSTTSYTSTPSYTST 71
Query: 716 VS 721
S
Sbjct: 72 TS 73
>SB_29302| Best HMM Match : LRR_1 (HMM E-Value=1.1e-11)
Length = 606
Score = 27.9 bits (59), Expect = 9.8
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +2
Query: 518 CCCCCIYSSTFSISKQSPS 574
CCCCC + F K P+
Sbjct: 513 CCCCCFFCFNFCCGKCKPN 531
>SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +2
Query: 5 KEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 178
+EF FG + V GF F F +A AV E++GR + + V LA+
Sbjct: 20 REFETFGPLRDVWVARNP---PGFAFCVFEDRRDAEDAVRELDGRYICGQRARVELAK 74
>SB_53239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 520
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +2
Query: 11 FAPFGTITSAKVML-----EDGRSKGFGFVCFSSPEEATKAVTEMNGR 139
F +G + S K+M E R++ GFV + ++ KA+ + G+
Sbjct: 226 FGKYGPLASVKIMWPRTEEEKSRNRNCGFVAYMRRKDGDKAIKHLTGK 273
>SB_39021| Best HMM Match : M (HMM E-Value=5.3e-06)
Length = 1691
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 291 CTIAPSSTTLLWTSSNDSNKTYNSKVE 371
CT+ ST L W++ D + YN +E
Sbjct: 836 CTVKECSTDLSWSTMTDMERVYNEFLE 862
>SB_36687| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1115
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 426 HICICRCCLCARPYRGLCIPPWSCRS 349
++ CR R RGLC+PPW R+
Sbjct: 465 YVLSCRV-RTGRSIRGLCLPPWCSRA 489
>SB_33125| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 937
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = +1
Query: 355 TTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARP 498
T+ A+PP RP A A + PT R P R G+ P
Sbjct: 584 TSTEGPARPPARPPPTAKPAVNRLSPTRRSLPPVATHQEDRYRPGSTP 631
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 599 AQPTSSTTSSAYPRTRTSDLYYACSSTTPGTETDAWGTTVSTYSENAP 742
A P+S T +SAYP + T+ Y +TT + T S + P
Sbjct: 230 AYPSSYTAASAYPSSYTAASVYLSETTTAASAYPPSYTAASVSTSTEP 277
>SB_11627| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=2.6)
Length = 496
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +1
Query: 304 PPAPRYYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAP 450
PP+P Y P+ + P+ PR+ PP PS+ Y Y P+P
Sbjct: 335 PPSPPRY-PSSHPRYPPSPPRYPPSPPRYPSSH--PRYPPSPLRYLPSP 380
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,394,330
Number of Sequences: 59808
Number of extensions: 666283
Number of successful extensions: 2562
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 2162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2540
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2131907602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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