Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0290
         (553 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   1.6  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    22   3.6  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    22   4.8  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              21   8.3  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              21   8.3  

>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = +1

Query: 190 TRPAHSSRSDHCEREPARS*CCIIPQP 270
           TRPA   R    E EP  +    IPQP
Sbjct: 27  TRPARLRREAKPEAEPGNNRPIYIPQP 53



 Score = 22.2 bits (45), Expect = 3.6
 Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
 Frame = +1

Query: 88  KPIFAPEIID-FPLPDGGAVTEANRALPRYRWTSRTRPAHSSRSDHCEREPARS*CCIIP 264
           +PI+ P+     P     A +EA     R  +  + RP H       E EP  +    IP
Sbjct: 74  RPIYIPQPRPPHPRLRREAESEAEPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRPVYIP 133

Query: 265 QP 270
           QP
Sbjct: 134 QP 135



 Score = 22.2 bits (45), Expect = 3.6
 Identities = 17/61 (27%), Positives = 24/61 (39%)
 Frame = +1

Query: 88  KPIFAPEIIDFPLPDGGAVTEANRALPRYRWTSRTRPAHSSRSDHCEREPARS*CCIIPQ 267
           +P++ P+    P P      EA     R  +  + RP H       E EP  +    IPQ
Sbjct: 102 RPVYIPQPRP-PHPRLRREPEAEPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQ 160

Query: 268 P 270
           P
Sbjct: 161 P 161


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = +1

Query: 190 TRPAHSSRSDHCEREPARS*CCIIPQP 270
           TRP    R    E EP  +    IPQP
Sbjct: 27  TRPTRLRREAEPEAEPGNNRPVYIPQP 53


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = +1

Query: 190 TRPAHSSRSDHCEREPARS*CCIIPQP 270
           TRP    R    E EP  +    IPQP
Sbjct: 26  TRPTRLRREAKPEAEPGNNRPVYIPQP 52


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 226 EREPARS*CCIIPQPVIVDESDEVK 300
           + +P R   CI+ Q  IVDES   K
Sbjct: 56  DEKPQRYNECILKQFNIVDESGNFK 80


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 226 EREPARS*CCIIPQPVIVDESDEVK 300
           + +P R   CI+ Q  IVDES   K
Sbjct: 56  DEKPQRYNECILKQFNIVDESGNFK 80


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,527
Number of Sequences: 438
Number of extensions: 2695
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)