Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0192
         (426 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7MVH8 Cluster: Putative uncharacterized protein; n=1; ...    33   1.9  
UniRef50_Q6YQS6 Cluster: Putative uncharacterized protein; n=4; ...    33   3.3  
UniRef50_A0D9Y1 Cluster: Chromosome undetermined scaffold_42, wh...    32   5.7  

>UniRef50_Q7MVH8 Cluster: Putative uncharacterized protein; n=1;
           Porphyromonas gingivalis|Rep: Putative uncharacterized
           protein - Porphyromonas gingivalis (Bacteroides
           gingivalis)
          Length = 313

 Score = 33.5 bits (73), Expect = 1.9
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
 Frame = +2

Query: 122 DRLPVFIYVMRS*IINTFLVFSSRVVEIIKSVNYSTRRI*YKDN*KKRFLNYKRSFNLTI 301
           +R+PV I+  +  I   F   SS V +  K +NY T R+    N  + F N K++  + +
Sbjct: 215 ERIPVRIFAGKKGIDCFFQYESSEVQKTKKGINYHTHRVSMLINESETFKNPKKAITIWL 274

Query: 302 FSD-NSITINAR 334
            +D N I +  R
Sbjct: 275 TNDANRIPVRIR 286


>UniRef50_Q6YQS6 Cluster: Putative uncharacterized protein; n=4;
           Candidatus Phytoplasma asteris|Rep: Putative
           uncharacterized protein - Onion yellows phytoplasma
          Length = 115

 Score = 32.7 bits (71), Expect = 3.3
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = -3

Query: 277 IIKEAFFLIIFILYPTCRIIYTFNYFYDSRRKN*KSIDYL 158
           + +  FF  IFI++    +I+  NYFY    KN K I+YL
Sbjct: 1   MFESIFFKFIFIVFICLLVIFIMNYFYRKNVKN-KIINYL 39


>UniRef50_A0D9Y1 Cluster: Chromosome undetermined scaffold_42, whole
           genome shotgun sequence; n=4; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_42,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 527

 Score = 31.9 bits (69), Expect = 5.7
 Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
 Frame = +2

Query: 128 LPVFIYVMRS*IINTFLVFSSRVVEIIKSVNYSTRRI*YKDN-*KKRFLNYKRSFNLTIF 304
           L  F+Y+M S II T +V       IIK +NY+++++ +KD+  KK FL   + F+    
Sbjct: 379 LGFFLYMMSSLIITTSVVIFL-FNPIIKIINYTSQQL-FKDSLNKKHFLKQHKHFSFFEK 436

Query: 305 SDNSITIN 328
             NS  +N
Sbjct: 437 FSNSQLLN 444


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 350,649,322
Number of Sequences: 1657284
Number of extensions: 5927257
Number of successful extensions: 11613
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11611
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20232460752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)