Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0192
         (426 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U61945-2|AAB03125.2|  494|Caenorhabditis elegans Hypothetical pr...    27   5.6  
AL117195-18|CAB55029.1|  490|Caenorhabditis elegans Hypothetical...    27   5.6  
Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical pr...    27   7.4  
Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical pr...    27   7.4  

>U61945-2|AAB03125.2|  494|Caenorhabditis elegans Hypothetical
           protein C49C8.4 protein.
          Length = 494

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 253 IIFILYPTCRIIYTFNYFYDSRRK 182
           +I ++  +  IIY FN+FY  RRK
Sbjct: 1   MILLILTSILIIYLFNHFYWKRRK 24


>AL117195-18|CAB55029.1|  490|Caenorhabditis elegans Hypothetical
           protein Y57A10A.25 protein.
          Length = 490

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = +2

Query: 206 IKSVNYSTRRI*YKDN*KKRFLNYKRS-FNLTIFSDNSITINARRIRQLSTLTF 364
           I SV  +T ++ +K   K+R L Y+   FN+  FS+   TI    ++ L+  +F
Sbjct: 91  ILSVGIATMKLTHKSE-KRRALRYETQVFNILTFSEKPFTIEPSALQFLAKHSF 143


>Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical
           protein ZC116.3 protein.
          Length = 3871

 Score = 26.6 bits (56), Expect = 7.4
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1

Query: 79  FCVRVKPCCKIPCYRQATCIYLCNA 153
           FC +  PC   PC    TCI + N+
Sbjct: 378 FCEKTSPCQTNPCKNGGTCIAVENS 402


>Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical
           protein ZC116.3 protein.
          Length = 3871

 Score = 26.6 bits (56), Expect = 7.4
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1

Query: 79  FCVRVKPCCKIPCYRQATCIYLCNA 153
           FC +  PC   PC    TCI + N+
Sbjct: 378 FCEKTSPCQTNPCKNGGTCIAVENS 402


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,385,363
Number of Sequences: 27780
Number of extensions: 153118
Number of successful extensions: 371
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 371
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 703342068
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)