Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0186
(625 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 163 1e-42
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 162 3e-42
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 141 6e-36
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 24 1.0
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 24 1.0
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 24 1.0
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 1.8
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 3.2
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 22 5.6
AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein. 21 9.8
AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein. 21 9.8
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 9.8
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 163 bits (396), Expect = 1e-42
Identities = 75/84 (89%), Positives = 79/84 (94%)
Frame = +1
Query: 10 AADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKS 189
AADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEK DRRTGK+TE NPKSIKS
Sbjct: 337 AADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKS 396
Query: 190 GDAAIVNLVPSKPLCVESFQEFHP 261
GDAAIV L P+KP+CVE+FQEF P
Sbjct: 397 GDAAIVMLQPTKPMCVEAFQEFPP 420
Score = 50.8 bits (116), Expect = 1e-08
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +3
Query: 255 PPLGRFAVRDMRQTVAVGVIKAVNF 329
PPLGRFAVRDMRQTVAVGVIK+V F
Sbjct: 419 PPLGRFAVRDMRQTVAVGVIKSVTF 443
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 162 bits (393), Expect = 3e-42
Identities = 74/84 (88%), Positives = 78/84 (92%)
Frame = +1
Query: 10 AADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKS 189
AADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFA+IKEK DRR GK+TE NPKSIKS
Sbjct: 337 AADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFADIKEKCDRRNGKTTEENPKSIKS 396
Query: 190 GDAAIVNLVPSKPLCVESFQEFHP 261
GDAAIV LVPSKP+C E+FQEF P
Sbjct: 397 GDAAIVMLVPSKPMCAEAFQEFPP 420
Score = 52.0 bits (119), Expect = 5e-09
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +3
Query: 255 PPLGRFAVRDMRQTVAVGVIKAVNF 329
PPLGRFAVRDMRQTVAVGVIKAV F
Sbjct: 419 PPLGRFAVRDMRQTVAVGVIKAVTF 443
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 141 bits (341), Expect = 6e-36
Identities = 66/72 (91%), Positives = 68/72 (94%)
Frame = +1
Query: 10 AADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKS 189
AADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEK DRRTGK+TE NPKSIKS
Sbjct: 48 AADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKS 107
Query: 190 GDAAIVNLVPSK 225
GDAAIV L P+K
Sbjct: 108 GDAAIVMLQPTK 119
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 24.2 bits (50), Expect = 1.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 436 KYRSCMKNCAVNSSSYFLPLVAFS 365
K+ C+KN A SSYF+ + F+
Sbjct: 94 KFYDCLKNSADTISSYFVGKMYFN 117
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 24.2 bits (50), Expect = 1.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 436 KYRSCMKNCAVNSSSYFLPLVAFS 365
K+ C+KN A SSYF+ + F+
Sbjct: 99 KFYDCLKNSADTISSYFVGKMYFN 122
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 24.2 bits (50), Expect = 1.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 436 KYRSCMKNCAVNSSSYFLPLVAFS 365
K+ C+KN A SSYF+ + F+
Sbjct: 99 KFYDCLKNSADTISSYFVGKMYFN 122
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 23.4 bits (48), Expect = 1.8
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 475 CSPFFLRNTFR*MKYRSCMKN 413
C FF R+ + ++YR C KN
Sbjct: 87 CKGFFRRSIQQKIQYRPCTKN 107
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.6 bits (46), Expect = 3.2
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = -1
Query: 358 LVTLPPPASLKLTALMTPTATVCLMSRTAKRPRGGIPGRTLH 233
L+ PP S ++T T T ++ + R I G T+H
Sbjct: 1361 LIVHAPPHSPQITLTATTTNSLTMKVRPHPTDNAPIHGYTIH 1402
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 21.8 bits (44), Expect = 5.6
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +3
Query: 66 RLHTSLGLPHCPHC 107
RLHT HC HC
Sbjct: 30 RLHTGEKPYHCSHC 43
>AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein.
Length = 136
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +1
Query: 169 NPKSIKSGDAAIVNLVPSKPLC 234
NP+ G +V L PS P C
Sbjct: 66 NPEHKPPGPKDLVYLEPSPPFC 87
>AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein.
Length = 135
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +1
Query: 169 NPKSIKSGDAAIVNLVPSKPLC 234
NP+ G +V L PS P C
Sbjct: 67 NPEHKPPGPKDLVYLEPSPPFC 88
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.0 bits (42), Expect = 9.8
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +2
Query: 191 EMQPLSTWYLPSL 229
+ P+ WY+PSL
Sbjct: 589 DKNPVQLWYVPSL 601
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,048
Number of Sequences: 438
Number of extensions: 3291
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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