Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0184
(614 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 46 3e-05
SB_26911| Best HMM Match : Trypsin (HMM E-Value=0) 45 6e-05
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 44 1e-04
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 43 2e-04
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.002
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.003
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 37 0.015
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.015
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 36 0.026
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 36 0.026
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.034
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.034
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 36 0.034
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.046
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.060
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.060
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.060
SB_38755| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.11
SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 33 0.14
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.24
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.32
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08) 32 0.32
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.32
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 32 0.42
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.56
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 31 0.74
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 31 0.74
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 31 0.98
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 30 1.3
SB_24326| Best HMM Match : DENN (HMM E-Value=0) 30 1.3
SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2) 30 1.3
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_44522| Best HMM Match : Ank (HMM E-Value=0) 30 1.7
SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23) 30 1.7
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 30 1.7
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_37927| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 29 4.0
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_7790| Best HMM Match : DUF366 (HMM E-Value=1.4) 28 5.2
SB_32794| Best HMM Match : Gam (HMM E-Value=5.8) 28 6.9
SB_18721| Best HMM Match : CUB (HMM E-Value=0) 28 6.9
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098) 27 9.1
SB_26962| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 27 9.1
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +3
Query: 294 NVNRIIIHPNYN-RRTADSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWG 470
+V RII+HP Y D D+ +++ S + YN+ VRP+ + +L +N + +GWG
Sbjct: 181 DVERIILHPKYAPHNNHDYDVALIKLASPLQYNDRVRPVCLPSLKEDLEENTQCYISGWG 240
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 76 RIIGGSTTNINQYPGIAALLYTWNW-NQWWQSCGGNILNQRSILSAAHC 219
RI+GG+ +P ++ Y N + CGG+++ I++AAHC
Sbjct: 103 RIVGGTRAKKGAWPWQISMNYVHNKVTKTPHICGGSVVAPEWIVTAAHC 151
>SB_26911| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 349
Score = 44.8 bits (101), Expect = 6e-05
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Frame = +3
Query: 297 VNRIIIHPNYNRR-TADSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWGA 473
V+++I+HP+Y + T D+ +L+ + NNNV + + D W GWG
Sbjct: 187 VSKVILHPSYGKPVTLAHDIALLKLEKSATVNNNVHTVCLPFNGPAPSDCTHCWITGWGH 246
Query: 474 TSLGGSNSEQLRTSRSGPSIRMPASNVTDPLTVLSPLTCCAL 599
+ GG + L+ + S P + + P + S + C L
Sbjct: 247 LASGGDTPDLLQQA-SVPIVSRSRCDKAYPGKIDSSMLCAGL 287
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +3
Query: 297 VNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWGAT 476
V RII H NY+ T D D +L+ + + V+P+ + +++ G + + GWG+T
Sbjct: 371 VERIISHANYSYNTVDYDYALLKLTRPLNFTQYVQPVCLPDSDFPAG--TLCYVTGWGST 428
Query: 477 SLGGSNS 497
+ GS S
Sbjct: 429 NYRGSPS 435
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +3
Query: 297 VNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWGAT 476
V RII H NY+ T D D +L+ + + V+P+ + +++ G + + GWG+T
Sbjct: 620 VERIISHANYSYNTVDYDYALLKLTRPLNFTQYVQPVCLPDSDFPAG--TLCYVTGWGST 677
Query: 477 SLGGSNS 497
+ GS S
Sbjct: 678 NYRGSPS 684
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 79 IIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 219
I+GG+ ++P ++ N + CGGN+++ +L+AAHC
Sbjct: 546 IMGGANAEHGEWPWQVSMKL--NSSSLPHICGGNVISPWWVLTAAHC 590
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +3
Query: 297 VNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWGAT 476
V ++I+HPNY R+T DSD+ +LR + N V I + + + + GWG T
Sbjct: 1405 VRQVIVHPNYRRQTTDSDVALLRLSHPATLNKAVSLICLPKEGESEAVGKNCYITGWGRT 1464
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Frame = +3
Query: 294 NVNRIIIHPNYNRRTA-DSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWG 470
+V RII+HP Y TA ++D+ +++ N N V + L D ++ +A GWG
Sbjct: 426 SVARIIVHPQYFEPTAINNDIALIKLNKPARLNKYVNLACLPRQGEELSDGKICYATGWG 485
Query: 471 ATSLGG---SNSEQLRTSRSGPSIRMPASNVTDPLTVLSPLTC 590
T +GG S S+ L+ + R D + + + + C
Sbjct: 486 LT-VGGDWKSQSDVLKQTPLPVVNRQECQTDYDDIPITTAMMC 527
Score = 31.9 bits (69), Expect = 0.42
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 76 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 219
RII GS N +P + + N+N CGG +++ + +++AAHC
Sbjct: 351 RIISGSDAQPNSWPWMVQI----NYNNG-HHCGGTLVSPQWVVTAAHC 393
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/75 (30%), Positives = 36/75 (48%)
Frame = +3
Query: 294 NVNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWGA 473
++ I +HP YN + + DL +L+ +N+ V PI I AN + + AGWG
Sbjct: 1312 SIKAIFVHPQYNSSSHEHDLAVLQLQQPAEFNSRVSPICIV-ANEEVQAGRACAVAGWGQ 1370
Query: 474 TSLGGSNSEQLRTSR 518
+ L + L T R
Sbjct: 1371 SYLPRITTIPLLTRR 1385
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/52 (40%), Positives = 34/52 (65%)
Frame = +1
Query: 76 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGD 231
RI+GG+ IN +P A LL + N +Q+ CGG++++ +L+AAHC G+
Sbjct: 29 RIVGGTEAPINGWPWQAMLLRSPNGDQF---CGGSLIDPGWVLTAAHCLVGE 77
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +3
Query: 297 VNRIIIHPNYNRRTA-DSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQV--VWAAGW 467
V +II H NY+ +D+ +L+ + N V + +A N +L ++ + GW
Sbjct: 102 VAQIIPHKNYHSPIEMANDIALLKLENPANLVNGVGTVCLANNNTHLPVDEFGKCYITGW 161
Query: 468 GATSLGGSNSEQL 506
G+ S GG+ ++L
Sbjct: 162 GSLSSGGAAPDRL 174
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/61 (34%), Positives = 36/61 (59%)
Frame = +1
Query: 76 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGRWRIR 255
RI+GG+T +P A L Y +N N + CGG +++ R +++A+HC + TG +R
Sbjct: 248 RIVGGTTAQRGAWPWQAMLRY-YNGNHF---CGGTLVHPRWVVTASHCVHKLTTGDLYVR 303
Query: 256 L 258
+
Sbjct: 304 M 304
Score = 34.3 bits (75), Expect = 0.080
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +3
Query: 297 VNRIIIHPNYNRRTA-DSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWGA 473
+ RI +HPNY+ +D+ +L + + +A + L D W +GWG
Sbjct: 321 IQRIFMHPNYHSPVQYANDIALLLLDRPARLDRYTNLACLAPRSSPLPDGTRCWISGWGR 380
Query: 474 TSLGGSNSEQL 506
S GG++ L
Sbjct: 381 LSSGGASPNVL 391
>SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +3
Query: 246 AYSVGSTFANSGGVVHNVNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPINI--AG 419
A + G+ + G +++I HP ++ TAD D+ ILR ++ + ++V I + G
Sbjct: 17 AQTKGAHYREHDGKELTISKITYHPGFSFATADHDIAILRLSAPVLLTSSVNTICLPSQG 76
Query: 420 ANYNLGDNQVVWAAGWG 470
A +LG N + +GWG
Sbjct: 77 ARASLGGN--CFISGWG 91
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/71 (30%), Positives = 40/71 (56%)
Frame = +1
Query: 73 QRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGRWRI 252
+RI+GG + I Q+P + A++ Q+CGG+++ + I++AAHC + RWR+
Sbjct: 39 RRIMGGQRSTIEQHPWMVAMMLDSA-----QACGGSLVPEDWIVTAAHC-FDSNRLRWRV 92
Query: 253 RLVPPLPTVGV 285
+P+ V
Sbjct: 93 VAGNDMPSKAV 103
Score = 29.9 bits (64), Expect = 1.7
Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 7/78 (8%)
Frame = +3
Query: 297 VNRIIIHPNYNRRTA-------DSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVW 455
V+ I HP Y A D D+ +++ ++A PI + + + +
Sbjct: 108 VSAIWRHPQYKSNIASLESGPCDYDVALVKLEKSVATTPKTVPICLVPRDTPRDLKRDCY 167
Query: 456 AAGWGATSLGGSNSEQLR 509
AGWG S GG S LR
Sbjct: 168 VAGWGRRSFGGEQSLALR 185
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +1
Query: 61 PTNPQRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC--PYGDA 234
P +R++GG Q+P ALL+ Q CGG ++++R +++ AHC PY
Sbjct: 23 PRRFRRVVGGDEAKAGQFPWQIALLFKRQ-----QYCGGALVHERWVVTGAHCFNPYTSE 77
Query: 235 TGR-WRIRL 258
R W + L
Sbjct: 78 DPRDWNVTL 86
Score = 32.3 bits (70), Expect = 0.32
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +3
Query: 348 DLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWGATSLGGSNSEQL 506
D+ ++ + + +N +V+PI I N + N + +GWG T GS L
Sbjct: 128 DIALIELDRPVVFNFHVQPICIMRPNISFKWNTACFISGWGHTRWNGSQPNVL 180
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +1
Query: 76 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPY 225
RIIGG+T + +P A +L + W CGG +++ +++AAHC +
Sbjct: 284 RIIGGTTAAPHDWPWQAQILIHVD-KSWNHRCGGTLIDTEWVVTAAHCVF 332
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 37.1 bits (82), Expect = 0.011
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +1
Query: 76 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGRWRIR 255
RI+GGST +P L+Y N Q CGG ++ +++AAHC ++R
Sbjct: 630 RIVGGSTAPPGAWPWQVMLIY----NSGRQFCGGTLVTPEWVITAAHCVVDKNPASIQVR 685
Query: 256 L 258
L
Sbjct: 686 L 686
Score = 31.5 bits (68), Expect = 0.56
Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +3
Query: 294 NVNRIIIHPNYNR-RTADSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWG 470
++ I HP+Y + + +D+ +LR + + + + + + + + GWG
Sbjct: 703 SIRSIHNHPDYGSPKRSSNDIALLRLSRPTILTHRINLACMPNDTVHFPNGTMCYITGWG 762
Query: 471 ATSLGGSNSEQL 506
S GGS E L
Sbjct: 763 TLSSGGSQPEAL 774
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 36.7 bits (81), Expect = 0.015
Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 4/105 (3%)
Frame = +3
Query: 297 VNRIIIHPNYNRRTADS-DLCILRSNSNIAYNNNVRPINIAGA--NYNLGD-NQVVWAAG 464
V++I+ H +YN S D+ +++ + N V + + L D NQ W G
Sbjct: 21 VSKIVSHTSYNSPLQYSHDIALIKLATPAIMGNGVGTVCLPDTIQKLPLDDLNQKCWITG 80
Query: 465 WGATSLGGSNSEQLRTSRSGPSIRMPASNVTDPLTVLSPLTCCAL 599
WG + GG+ +L + S P + N P + + C L
Sbjct: 81 WGTLASGGNQPNKLMQA-SVPLVSQSKCNTAYPNKIHDSMLCAGL 124
Score = 34.7 bits (76), Expect = 0.060
Identities = 17/48 (35%), Positives = 31/48 (64%)
Frame = +1
Query: 76 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 219
RI+GG+ +N +P A+L + +Q+ CGG++++ +L+AAHC
Sbjct: 259 RIVGGTEAPVNGWPW-QAMLRSAGGSQF---CGGSLIHPEWVLTAAHC 302
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 36.7 bits (81), Expect = 0.015
Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 4/105 (3%)
Frame = +3
Query: 297 VNRIIIHPNYNRRTADS-DLCILRSNSNIAYNNNVRPINIAGA--NYNLGD-NQVVWAAG 464
V++I+ H +YN S D+ +++ + N V + + L D NQ W G
Sbjct: 365 VSKIVSHTSYNSPLQYSHDIALIKLATPAIMGNGVGTVCLPDTIQKLPLDDLNQKCWITG 424
Query: 465 WGATSLGGSNSEQLRTSRSGPSIRMPASNVTDPLTVLSPLTCCAL 599
WG + GG+ +L + S P + N P + + C L
Sbjct: 425 WGTLASGGNQPNKLMQA-SVPLVSQSKCNTAYPNKIHDSMLCAGL 468
Score = 34.7 bits (76), Expect = 0.060
Identities = 17/48 (35%), Positives = 31/48 (64%)
Frame = +1
Query: 76 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 219
RI+GG+ +N +P A+L + +Q+ CGG++++ +L+AAHC
Sbjct: 219 RIVGGTEAPVNGWPW-QAMLRSAGGSQF---CGGSLIHPEWVLTAAHC 262
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 35.9 bits (79), Expect = 0.026
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +1
Query: 76 RIIGGSTTNINQYPG-IAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPY 225
RI+GG+ +P + + + NQ Q CGG ++N+ +L+AAHC Y
Sbjct: 126 RIVGGNEAGHGTWPWQVGIYRFDHSGNQM-QICGGALINREWVLTAAHCFY 175
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 35.9 bits (79), Expect = 0.026
Identities = 19/73 (26%), Positives = 34/73 (46%)
Frame = +1
Query: 1 GTRRSTIIXXXXXXXXXXXXPTNPQRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGN 180
G +T++ ++ RI+GG+ N +P A L T + CGG+
Sbjct: 365 GKTTTTVVPPTLPPVGVCGVSSSTSRIVGGAAANPGDWPWQAQLRTTTGFPY----CGGS 420
Query: 181 ILNQRSILSAAHC 219
+++ +L+AAHC
Sbjct: 421 LIHSNWVLTAAHC 433
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 297 VNRIIIHPNYNRRTADSDLCILR 365
V+ II H NYN RT +D+ +L+
Sbjct: 464 VSAIITHSNYNSRTMYNDIALLK 486
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 35.5 bits (78), Expect = 0.034
Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +3
Query: 297 VNRIIIHPNYNR--RTADSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWG 470
+ +I +H +YN ++D+ ++R V+P+ +A + W GWG
Sbjct: 289 IAKIYLHADYNLYPHQYNNDVALIRLAKPAIRTRYVQPVCLADGTVSFPPGTECWITGWG 348
Query: 471 ATSLGGSNSEQLRTSRS 521
GG++ E L+ +++
Sbjct: 349 RLHSGGASPEILQQAKT 365
Score = 31.5 bits (68), Expect = 0.56
Identities = 14/48 (29%), Positives = 29/48 (60%)
Frame = +1
Query: 76 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 219
RI+GG+ ++P A L++ + Q CGG ++++ +++A+HC
Sbjct: 210 RIVGGNDAMHGEWPWQAMLMFQTPLG-YKQFCGGALVHEDWVVTASHC 256
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 35.5 bits (78), Expect = 0.034
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = +1
Query: 76 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGRWRIR 255
RI+GG+ +P A L N Q CGG +++ + +++AAHC Y ++IR
Sbjct: 139 RIVGGTKAPPGAWPWQAML----RSNYGGQFCGGTLVHPQWVITAAHCVYRRGPNDFKIR 194
Query: 256 L 258
+
Sbjct: 195 M 195
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/58 (22%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 294 NVNRIIIHPNYNRRTADS-DLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAG 464
+++R+I HP+Y++ T + D+ ++ N V +A ++ + D + W G
Sbjct: 211 SLSRVITHPSYHKPTRYAHDIALIELAKPAVINKAVGLACLADPSFPIDDGKKCWVTG 268
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 35.5 bits (78), Expect = 0.034
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = +1
Query: 76 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGRWRIR 255
RI+GG+ N +P A L T + CGG++++ + IL+A HC G + IR
Sbjct: 53 RIVGGTAAKQNSWPWQAQLRTT----SGFPYCGGSLIHPQWILTATHCVSGKSASSIVIR 108
Query: 256 LV 261
V
Sbjct: 109 NV 110
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 35.1 bits (77), Expect = 0.046
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = +1
Query: 61 PTNPQR--IIGGSTTNINQYPGIAALLY-TWNWNQWWQSCGGNILNQRSILSAAHC 219
PTN +R I GGS + YP AL + T+ N CGG ++ + +L+AAHC
Sbjct: 1153 PTNHKRLRIYGGSDSIPGGYPWQVALEFDTFQSNYNTFHCGGTLIAEDWVLTAAHC 1208
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 527 INQNACVQRYRPINRAITANMLCSG 601
+N NAC + Y +T+NMLC+G
Sbjct: 1322 VNHNACKKAYENETWPVTSNMLCAG 1346
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 306 IIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPI 407
I HP ++ RT DSD+ ++R VRP+
Sbjct: 1247 IYSHPRFSWRTYDSDIALIRLRWKANITEYVRPV 1280
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 34.7 bits (76), Expect = 0.060
Identities = 22/71 (30%), Positives = 35/71 (49%)
Frame = +1
Query: 76 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGRWRIR 255
RI+GG T + +P A L + CGG+++N+ +++AAHC D R
Sbjct: 432 RIVGGQTAKVEDWPWQAGLKKGLDDTI---VCGGSLINREWVVTAAHCI--DRNNPSRTG 486
Query: 256 LVPPLPTVGVL 288
V P P + V+
Sbjct: 487 CVVPDPPIRVI 497
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 34.7 bits (76), Expect = 0.060
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +3
Query: 312 IHPNYNRRTADSDLCILRSNSNIAYNNNVRPINI--AGANY-NLGDNQVVWAAGWGATSL 482
IHP+Y+ + DSD+ ++R + + + V+PI + A ++Y L N +GWG L
Sbjct: 198 IHPHYSPDSYDSDIALIRLAQPVTFTDYVKPICLPSAASDYAQLQANVSGTISGWGKRKL 257
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 34.7 bits (76), Expect = 0.060
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 6/53 (11%)
Frame = +1
Query: 118 GIAALLYTWNWNQWWQS------CGGNILNQRSILSAAHCPYGDATGRWRIRL 258
G ALL W W W CGG+++ +L+AAHC D ++++ L
Sbjct: 35 GSEALLGEWPWQAWLHLQHTGFICGGSLVAPGWVLTAAHCILSDDASKYKVVL 87
>SB_38755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 471
Score = 33.9 bits (74), Expect = 0.11
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +3
Query: 273 NSGGVVHNVNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVV 452
N+ ++ N N III+ N N I+ +N+ I NNN+ INI N N+ N ++
Sbjct: 394 NNNNIIINNNNIIINNNINNNNI-----IINNNNIIIINNNIININIIINNNNIIINNII 448
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 33.9 bits (74), Expect = 0.11
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = +1
Query: 61 PTNPQRIIGGSTTNINQYPG-IAALLYTWNWNQWWQSCGGNILNQRSILSAAHC--PYGD 231
P RI+GG N +P + +L T N + CGG++++ IL+++HC Y +
Sbjct: 240 PPPESRIVGGREAPRNSWPWQVEIILKTPNLTTHY--CGGSLIDPYWILTSSHCFWTYNN 297
Query: 232 ATGRWRIRL 258
+ ++ IRL
Sbjct: 298 ISTQFEIRL 306
>SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +1
Query: 64 TNPQRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 219
T +RI+GG + +P AAL N CGG+++ + +++AAHC
Sbjct: 22 TRKRRIVGGIESANGAWPWQAALFL----NGTHHRCGGSVIKSQWVVTAAHC 69
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +1
Query: 73 QRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 219
Q+I+GG T +P + Y CGG+I+N + I++AAHC
Sbjct: 1781 QQIVGGKVTEHGAWPWQVQIGY----KTMGHICGGSIVNSQWIVTAAHC 1825
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +3
Query: 297 VNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWG-- 470
+ I++HP+YN D D+ +L+ I +N V + + A G + +GWG
Sbjct: 1865 IEGIVVHPSYN--DLDYDIALLKLRQPITFNAYVSQVCLPQAALLAG--TPCYVSGWGRI 1920
Query: 471 ATSLGGSN 494
S GSN
Sbjct: 1921 GESSPGSN 1928
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 32.7 bits (71), Expect = 0.24
Identities = 20/79 (25%), Positives = 35/79 (44%)
Frame = +3
Query: 291 HNVNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWG 470
H+V RII HP YN +D+ ++ +S + P++ G ++G + GWG
Sbjct: 138 HDVKRIITHPTYNSPQLSNDIALIELSSPV-------PLSDRGHQVSVGSK--CFITGWG 188
Query: 471 ATSLGGSNSEQLRTSRSGP 527
G + L+ + P
Sbjct: 189 KIRHPGGSHHILQQAMMPP 207
Score = 30.7 bits (66), Expect = 0.98
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +1
Query: 76 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 219
RI+GG+ +P A L T + CGG++++ + +L+A HC
Sbjct: 663 RIVGGTAAKQGDWPWQAQLRST----SGFPFCGGSLIHPQWVLTATHC 706
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +3
Query: 294 NVNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNL 434
NV ++I HP YN +D+ ++ S ++ V P+ + Y L
Sbjct: 548 NVKKVIAHPQYNNPRLSNDIALIELASPAKLSSRVNPVCLPPHGYKL 594
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 61 PTNPQRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 219
P R+IGG +P AL N+ CGG++++ +++AAHC
Sbjct: 471 PITQSRVIGGKDAIPGAWPWQIALKSRGNF-----ICGGSLVSSTWVVTAAHC 518
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +3
Query: 288 VHNVNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPINIAGANYN---LGDNQVVWA 458
+ N++ I HP ++ D+DL +++ + + VRPI + + + ++ A
Sbjct: 182 LRNISEIRTHPQFDHVLFDADLALIKLDGEAIISEYVRPICLPETDDQASLISPSKFGMA 241
Query: 459 AGWGAT 476
GWG T
Sbjct: 242 VGWGKT 247
Score = 31.9 bits (69), Expect = 0.42
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +1
Query: 73 QRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 219
QRI+GG T YP + + +CGG++++++ +L+AAHC
Sbjct: 106 QRIVGGHDTVKGAYPWHVLIRKGGH-----VACGGSLISEKWVLTAAHC 149
>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
Length = 153
Score = 32.3 bits (70), Expect = 0.32
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +1
Query: 76 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGRWRIR 255
RI+GG+ N +P A L + CGG +++ R +++A+HC RIR
Sbjct: 23 RIVGGTAAPKNAWPWQAQLRSA----SGFPFCGGTLVHPRFVVTASHCIDKKTPSSLRIR 78
Query: 256 L 258
L
Sbjct: 79 L 79
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +1
Query: 76 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGD 231
RI+GG +P +AA+ ++ CGG ++ + +++AAHC Y D
Sbjct: 723 RIVGGREAKAGAWPWLAAIYVKGSFR-----CGGALIARDWVVTAAHCFYYD 769
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 31.9 bits (69), Expect = 0.42
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +1
Query: 79 IIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC-PYGDATGRWRIR 255
IIGG+ + ++P +L T + CGG +L +L+AA C G W++
Sbjct: 258 IIGGTDAAVGEWPWQVSLYLT----HYGPVCGGTLLTSEWVLTAARCFRDNKRAGEWKVI 313
Query: 256 L 258
L
Sbjct: 314 L 314
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 31.5 bits (68), Expect = 0.56
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 73 QRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 219
+RI+GG +P ALL Q CGG+++N+ +++A HC
Sbjct: 52 KRIVGGVEAAPGAWPWQVALLMNGT-----QFCGGSLVNENWVVTARHC 95
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 31.1 bits (67), Expect = 0.74
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = +1
Query: 73 QRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPY 225
+R++ GS +P LL + + + CGG ++++ +++AAHC +
Sbjct: 42 KRVVSGSEVEPQSWPWQVHLLQSRD-GSFLHKCGGALIDREWVVTAAHCVF 91
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 31.1 bits (67), Expect = 0.74
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 76 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYG 228
R+I G + +P +L + CGG++++ +L+AAHC G
Sbjct: 37 RVINGVDATAHAWPWQISLRMMSKKGDDYHFCGGSLIDSEWVLTAAHCVAG 87
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 30.7 bits (66), Expect = 0.98
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
Frame = +1
Query: 118 GIAALLYTWNWNQW-----WQSCGGNILNQRSILSAAHC 219
G AA Y+W W SCGG +++ + +++AAHC
Sbjct: 480 GEAARPYSWPWQVSVSMGKLHSCGGALISSKWVITAAHC 518
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +1
Query: 70 PQ-RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 219
PQ RI+GG + N +P L+ N +CGG++++++ ++++ HC
Sbjct: 246 PQPRIVGGREASPNSWPWQVDLVV----NGTRHNCGGSLIDKQWVVTSGHC 292
>SB_24326| Best HMM Match : DENN (HMM E-Value=0)
Length = 1281
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = -2
Query: 511 VRSCSELDPPSDVAPQPAAQTTWLSPRL*LAPAILIGRT 395
V +CSE S +A Q TW+ RL LAPA +IGRT
Sbjct: 183 VFTCSEDPKLSPIATQMDEIETWIQ-RLLLAPAPVIGRT 220
>SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2)
Length = 157
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = +1
Query: 73 QRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC---PYGDA-TG 240
+RI+GG ++ +P ALL Q C G+++ R I++A HC P A
Sbjct: 52 KRIVGGVVSSEGLWPWQVALLLNDR-----QVCAGSLIEARWIITAGHCFKDPRSSADPD 106
Query: 241 RWRIRL 258
+W++ L
Sbjct: 107 KWKVLL 112
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 76 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 219
RII G + +P +L + +CGG++++ R +++AAHC
Sbjct: 105 RIINGQNAQPHSWPWQISL----RGRSGFHTCGGSLISDRWVVTAAHC 148
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/59 (22%), Positives = 29/59 (49%)
Frame = +3
Query: 297 VNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWGA 473
+++II HP YN R +D+ +L + + +++ + + + + + GWGA
Sbjct: 508 LSQIIEHPKYNDRRIVNDIALLELATPVQFDSAGKVGTVCLTDQRPAPGKRCYITGWGA 566
>SB_44522| Best HMM Match : Ank (HMM E-Value=0)
Length = 275
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +3
Query: 354 CILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWGATSLGGSNSEQ 503
C + +S + NN+V+ ++G++ G+N V G++ L G+NS Q
Sbjct: 115 CAVSGSSVLFGNNSVQDCTVSGSSVLFGNNSVQDCTVLGSSVLFGNNSVQ 164
>SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23)
Length = 136
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +3
Query: 393 NVRPINIAGANYNLGDNQVVWAAGWGATSLGGSNSEQLR 509
N+ P+ + + D + W GWG S GGS + L+
Sbjct: 7 NIHPVCLPELDPEPVDGKHCWVTGWGRLSSGGSTPDYLQ 45
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +1
Query: 76 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 219
RI+GG+ +P A L T + CGG+++ + IL+A HC
Sbjct: 10 RIVGGTAAKHGDWPWQAQLRTT----SGFPYCGGSLIAPQWILTATHC 53
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Frame = +1
Query: 118 GIAALLYTWNWNQWWQS------CGGNILNQRSILSAAHCPYGDATGRWRIRL 258
G A L W W W CGG+++ + +L+A HC + ++R+ L
Sbjct: 65 GDDATLGEWPWQAWLHVTPHGFVCGGSLIAPQWVLTAGHCILTEDPEKYRVVL 117
>SB_37927| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1032
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +1
Query: 61 PTNPQRIIGGSTTNINQYPGIAALLYTW 144
PTN RI+G S T Q+ G A L TW
Sbjct: 520 PTNATRIVGESHTVTCQFQGSPAPLVTW 547
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 28.7 bits (61), Expect = 4.0
Identities = 8/20 (40%), Positives = 16/20 (80%)
Frame = +1
Query: 160 WQSCGGNILNQRSILSAAHC 219
+ SCGG +++ R +++A+HC
Sbjct: 53 YHSCGGTLISDRWVVTASHC 72
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 76 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGD 231
RII G + +P +L + + CGG +++ R +++A+HC + D
Sbjct: 845 RIINGQNAQPHSWPWQISL----RQGRRFHLCGGALISDRWVVTASHCIHDD 892
>SB_7790| Best HMM Match : DUF366 (HMM E-Value=1.4)
Length = 707
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -2
Query: 604 NTRAQHVSG-DSTVNGSVTLDAGILIDGPDLDVRSCSELDPPSDVAPQPAAQT 449
N +H+ G + +N S + D + P +R S+LD SD + QP+++T
Sbjct: 184 NLEIKHLDGFEMPINASSSSDQSRCLQ-PTQVIRGISQLDIGSDASHQPSSET 235
>SB_32794| Best HMM Match : Gam (HMM E-Value=5.8)
Length = 511
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 520 DLDVRSCSELDPPSDVAPQPAAQTTWLSPRL 428
D++V L P VA P+A +W+SPRL
Sbjct: 169 DVEVLQSEGLFPTLAVAASPSAWYSWVSPRL 199
>SB_18721| Best HMM Match : CUB (HMM E-Value=0)
Length = 288
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Frame = +1
Query: 103 INQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPY---GDATGRWRIRLVP 264
+N P A + + + W CGGN+ N L+ + P T WRI L P
Sbjct: 37 VNLKPSTTAASFAFGSS--WAGCGGNLSNSTGQLTHPNYPRDMPNIGTCTWRITLAP 91
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/65 (18%), Positives = 29/65 (44%)
Frame = +3
Query: 297 VNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWGAT 476
+ ++ H ++ R +D+ +L+ + + ++ V + + + + GWG T
Sbjct: 104 LKQLFKHEQFSMRHLKNDIALLQLHEPVKASDKVNTVCLPSSGSRAQAGARCYITGWGRT 163
Query: 477 SLGGS 491
GGS
Sbjct: 164 VGGGS 168
>SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098)
Length = 1177
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 492 NSEQLRTSRSGPSIRMPASNVTDPLTVLSPL 584
NS+Q + G S+R S +TD LT LS L
Sbjct: 302 NSQQTVELKEGESLRREISRITDELTNLSRL 332
>SB_26962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = -3
Query: 222 WTVSGTKDRSLVKDVSTTRXXXXXXXPCIQQSSYTGILVNVGRGATN-NPLWVGRNSRHS 46
WT+ GTK + D T C+ + G+L++ G + WV RHS
Sbjct: 33 WTMPGTKVKVTRSDDPTHTPLLVTTGDCLGGKTMRGLLMSFGNTRRDGTDSWVSDQCRHS 92
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 27.5 bits (58), Expect = 9.1
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1
Query: 169 CGGNILNQRSILSAAHC 219
CGG++L+ +L+AAHC
Sbjct: 340 CGGSLLSSTWVLTAAHC 356
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,459,618
Number of Sequences: 59808
Number of extensions: 515372
Number of successful extensions: 1442
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 1213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1412
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1512078125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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