Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0184
         (614 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    41   8e-04
U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    33   0.21 
U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    31   0.65 
AL110479-23|CAB60320.2| 1254|Caenorhabditis elegans Hypothetical...    30   1.1  
AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cycl...    29   3.5  
AF045642-6|AAC02590.1|  632|Caenorhabditis elegans Hypothetical ...    28   4.6  
U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like pr...    28   6.1  
U51998-7|AAA96080.2|  769|Caenorhabditis elegans Hypothetical pr...    28   6.1  
U51998-6|ABS83845.1|  825|Caenorhabditis elegans Hypothetical pr...    28   6.1  
U51998-5|AAL00856.2|  648|Caenorhabditis elegans Hypothetical pr...    28   6.1  

>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 40.7 bits (91), Expect = 8e-04
 Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
 Frame = +3

Query: 237 RPLAYSVGSTFANSG-GVVHNVNRIIIHPNYNRRTADS-DLCILRSNSNIAYNNNVRPIN 410
           RP +YSV      SG G  H V  + IHP YN     S D  I+R +  +  +   RPI 
Sbjct: 106 RPTSYSVRVGGHRSGSGSPHRVTAVSIHPWYNIGFPSSYDFAIMRIHPPVNTSTTARPIC 165

Query: 411 IAGANYNLGDNQVVWAAGWGATSLGGSNS 497
           +   +    +N++    GWG+T  G S S
Sbjct: 166 L--PSLPAVENRLCVVTGWGSTIEGSSLS 192



 Score = 34.3 bits (75), Expect = 0.070
 Identities = 17/52 (32%), Positives = 30/52 (57%)
 Frame = +1

Query: 64  TNPQRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 219
           T   R+IGGS ++ + +P    LL     ++    CGG++++   +L+AAHC
Sbjct: 53  TLDHRLIGGSESSPHSWPWTVQLLSRLGHHR----CGGSLIDPNFVLTAAHC 100


>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 32.7 bits (71), Expect = 0.21
 Identities = 13/38 (34%), Positives = 25/38 (65%)
 Frame = +3

Query: 294 NVNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPI 407
           +V    IH  YN +TAD+D+ +LR +S+++    ++P+
Sbjct: 106 SVKEAYIHSGYNNQTADNDIALLRISSDLS-KLGIKPV 142


>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 31.1 bits (67), Expect = 0.65
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = +1

Query: 76  RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 219
           R++GG  T    +P  AAL    N       CG +IL++  +++AAHC
Sbjct: 26  RVVGGFETVPGAFPWTAALR---NKATKAHHCGASILDKTHLITAAHC 70


>AL110479-23|CAB60320.2| 1254|Caenorhabditis elegans Hypothetical
           protein Y105C5B.21a protein.
          Length = 1254

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -1

Query: 314 NDNSVHVMHNTPTVGKGGTNR-IRQRPVASPY 222
           ND+ VH M     V K  T R +RQ PV SPY
Sbjct: 115 NDDGVHQMQKVTRVTKVTTTRSVRQVPVQSPY 146


>AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cyclase
            protein 2 protein.
          Length = 1080

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +3

Query: 327  NRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNL 434
            N   AD D   L   ++  YNNN+R  N+A  N NL
Sbjct: 913  NESEADYDDIYLEKQNSGKYNNNIRHGNMAFRNANL 948


>AF045642-6|AAC02590.1|  632|Caenorhabditis elegans Hypothetical
           protein C17H12.12 protein.
          Length = 632

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 20/55 (36%), Positives = 28/55 (50%)
 Frame = +3

Query: 366 SNSNIAYNNNVRPINIAGANYNLGDNQVVWAAGWGATSLGGSNSEQLRTSRSGPS 530
           S+SN  YN N+R    +GAN N        A    + + GGS+ +Q R + SG S
Sbjct: 580 SSSNSVYNRNMRDDGTSGANGN------AEAGPSTSYASGGSSKKQPRETGSGSS 628


>U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like
           protease protein 6 protein.
          Length = 360

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +1

Query: 103 INQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 219
           IN Y  +  +  TW+     + C G + + R IL+A HC
Sbjct: 58  INTYTNVKNIDETWS-----KHCSGTLTSPRHILTATHC 91


>U51998-7|AAA96080.2|  769|Caenorhabditis elegans Hypothetical
           protein C12D12.1a protein.
          Length = 769

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 21/86 (24%), Positives = 31/86 (36%)
 Frame = -1

Query: 473 STPTSSPNNLVITKIVIGTSNINRTNVVVISYVGITA*DAEVTVSSTSVIVGMNDNSVHV 294
           +TPT++P N   +     T+ +N T+      V         T +ST+        +   
Sbjct: 647 TTPTTAPVNPT-SSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQT 705

Query: 293 MHNTPTVGKGGTNRIRQRPVASPYGQ 216
              TP V    T     RPV  P  Q
Sbjct: 706 TPTTPVVTTPSTITPTTRPVTQPASQ 731


>U51998-6|ABS83845.1|  825|Caenorhabditis elegans Hypothetical
           protein C12D12.1c protein.
          Length = 825

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 21/86 (24%), Positives = 31/86 (36%)
 Frame = -1

Query: 473 STPTSSPNNLVITKIVIGTSNINRTNVVVISYVGITA*DAEVTVSSTSVIVGMNDNSVHV 294
           +TPT++P N   +     T+ +N T+      V         T +ST+        +   
Sbjct: 703 TTPTTAPVNPT-SSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQT 761

Query: 293 MHNTPTVGKGGTNRIRQRPVASPYGQ 216
              TP V    T     RPV  P  Q
Sbjct: 762 TPTTPVVTTPSTITPTTRPVTQPASQ 787


>U51998-5|AAL00856.2|  648|Caenorhabditis elegans Hypothetical
           protein C12D12.1b protein.
          Length = 648

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 21/86 (24%), Positives = 31/86 (36%)
 Frame = -1

Query: 473 STPTSSPNNLVITKIVIGTSNINRTNVVVISYVGITA*DAEVTVSSTSVIVGMNDNSVHV 294
           +TPT++P N   +     T+ +N T+      V         T +ST+        +   
Sbjct: 526 TTPTTAPVNPT-SSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQT 584

Query: 293 MHNTPTVGKGGTNRIRQRPVASPYGQ 216
              TP V    T     RPV  P  Q
Sbjct: 585 TPTTPVVTTPSTITPTTRPVTQPASQ 610


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,399,398
Number of Sequences: 27780
Number of extensions: 352296
Number of successful extensions: 1153
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1151
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)