Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0183
         (609 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical ...    30   1.1  
AJ561220-1|CAD99220.1|   77|Caenorhabditis elegans NAS-32 protei...    28   4.5  
AF022979-10|AAB69905.3|  651|Caenorhabditis elegans Nematode ast...    28   4.5  
Z81083-4|CAB03102.1|  645|Caenorhabditis elegans Hypothetical pr...    27   7.9  
AC006651-11|AAM48540.1|  428|Caenorhabditis elegans Hypothetical...    27   7.9  
AC006651-10|AAF39866.2|  456|Caenorhabditis elegans Hypothetical...    27   7.9  

>AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical
           protein Y32B12B.4 protein.
          Length = 1528

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = -2

Query: 341 SQSRDSIT-LIIIIVHAAFNTSNWIEITKIYSTNFIYYTYDF 219
           S S D IT L+ I++      S+  +  ++ STNF+Y+ Y F
Sbjct: 407 SNSSDEITNLLKIVIDRCPGLSDLPKFEEVVSTNFVYHMYQF 448


>AJ561220-1|CAD99220.1|   77|Caenorhabditis elegans NAS-32 protein
           protein.
          Length = 77

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
 Frame = -2

Query: 371 QASHRLRLHHSQSR----DSITLIIIIVHAAFNTSNWIEITKIYSTNFIYYTY 225
           + +H L L H+Q R    D +T+ +  V  + +  N+I++T+  STN + Y Y
Sbjct: 2   EIAHTLGLFHTQMRSDRDDYVTIDLTDVPES-SQQNFIKLTEATSTNLVDYEY 53


>AF022979-10|AAB69905.3|  651|Caenorhabditis elegans Nematode
           astacin protease protein32 protein.
          Length = 651

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
 Frame = -2

Query: 371 QASHRLRLHHSQSR----DSITLIIIIVHAAFNTSNWIEITKIYSTNFIYYTY 225
           + +H L L H+Q R    D +T+ +  V  + +  N+I++T+  STN + Y Y
Sbjct: 292 EIAHTLGLFHTQMRSDRDDYVTIDLTDVPES-SQQNFIKLTEATSTNLVDYEY 343


>Z81083-4|CAB03102.1|  645|Caenorhabditis elegans Hypothetical
           protein F44F1.5 protein.
          Length = 645

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = -2

Query: 206 NQFNLHL*ILKTYIL--YIECCESRELIFCFSFPNT 105
           + F+LH  I    +L  Y E C    ++FCF+F NT
Sbjct: 610 SNFSLHTPIHDFIVLFFYAEFCNFFNVLFCFTFLNT 645


>AC006651-11|AAM48540.1|  428|Caenorhabditis elegans Hypothetical
           protein H06I04.1b protein.
          Length = 428

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -1

Query: 363 PPPTTASFSITRQHHFNYYH 304
           PPP +A+ SI R+HH N  H
Sbjct: 91  PPPPSANGSIHRKHHQNANH 110


>AC006651-10|AAF39866.2|  456|Caenorhabditis elegans Hypothetical
           protein H06I04.1a protein.
          Length = 456

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -1

Query: 363 PPPTTASFSITRQHHFNYYH 304
           PPP +A+ SI R+HH N  H
Sbjct: 91  PPPPSANGSIHRKHHQNANH 110


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,344,229
Number of Sequences: 27780
Number of extensions: 268164
Number of successful extensions: 720
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 720
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)