Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0180
         (543 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    24   0.75 
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   7.0  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   7.0  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   9.2  

>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 24.2 bits (50), Expect = 0.75
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -2

Query: 500 LMPVFTRNIPDPCFTSL 450
           ++ V+TRNIPD   TSL
Sbjct: 56  VLNVYTRNIPDGIHTSL 72


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +2

Query: 296 RAARITYVATTALMKFLLQQLRMANI 373
           ++AR+ Y   T L  FL+   +M  I
Sbjct: 51  KSARVVYALFTLLGTFLISGFQMQKI 76


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +2

Query: 296 RAARITYVATTALMKFLLQQLRMANI 373
           ++AR+ Y   T L  FL+   +M  I
Sbjct: 51  KSARVVYALFTLLGTFLISGFQMQKI 76


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 5/24 (20%), Positives = 12/24 (50%)
 Frame = +1

Query: 181 KRCSIR*SYSHRRIWCQQKRLGRC 252
           +RC+    +   ++WC    + +C
Sbjct: 452 QRCNAGLVFDEEKLWCDYPEVVKC 475


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,799
Number of Sequences: 336
Number of extensions: 2816
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)