Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0179
(765 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 4.1
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 4.1
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 4.1
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 22 7.2
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 7.2
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 7.2
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 9.5
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 9.5
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 9.5
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 9.5
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 9.5
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 9.5
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 9.5
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 9.5
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 9.5
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 9.5
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 9.5
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 4.1
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 5/26 (19%)
Frame = +2
Query: 131 VAIRMPPVIPINH-----YLGVLKTN 193
+A+ PPV+P NH YL V++ N
Sbjct: 353 LAVPAPPVLPENHLKNAKYLDVIERN 378
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 4.1
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 5/26 (19%)
Frame = +2
Query: 131 VAIRMPPVIPINH-----YLGVLKTN 193
+A+ PPV+P NH YL V++ N
Sbjct: 353 LAVPAPPVLPENHLKNAKYLDVIERN 378
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 4.1
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 5/26 (19%)
Frame = +2
Query: 131 VAIRMPPVIPINH-----YLGVLKTN 193
+A+ PPV+P NH YL V++ N
Sbjct: 353 LAVPAPPVLPENHLKNAKYLDVIERN 378
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 21.8 bits (44), Expect = 7.2
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -2
Query: 758 LSVPHVFVRDAATVLLSEPL*D 693
LSVP++FV+D +P D
Sbjct: 986 LSVPNIFVKDVLVFHQGQPTND 1007
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.8 bits (44), Expect = 7.2
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 700 SGSLRRTVAASRTNTCGTDNSD 765
SGS +T +ASR NT T + +
Sbjct: 611 SGSNNQTSSASRENTSNTTSME 632
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 7.2
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -3
Query: 742 YSCVTPRLSFSVSHSE 695
YSCV L+ VSH++
Sbjct: 683 YSCVARNLAAEVSHTQ 698
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.5
Identities = 8/44 (18%), Positives = 23/44 (52%)
Frame = +2
Query: 368 HRRYAPQTCQYHRGCVHRQRGAQMQLRAFNRNNFSIRYWSWNYR 499
+R+Y + + R R++ + ++ + NN++ ++ NY+
Sbjct: 56 YRKYGETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNNNYK 99
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.5
Identities = 8/44 (18%), Positives = 23/44 (52%)
Frame = +2
Query: 368 HRRYAPQTCQYHRGCVHRQRGAQMQLRAFNRNNFSIRYWSWNYR 499
+R+Y + + R R++ + ++ + NN++ ++ NY+
Sbjct: 56 YRKYGETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNNNYK 99
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.5
Identities = 8/44 (18%), Positives = 23/44 (52%)
Frame = +2
Query: 368 HRRYAPQTCQYHRGCVHRQRGAQMQLRAFNRNNFSIRYWSWNYR 499
+R+Y + + R R++ + ++ + NN++ ++ NY+
Sbjct: 56 YRKYGETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNNNYK 99
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.5
Identities = 8/44 (18%), Positives = 23/44 (52%)
Frame = +2
Query: 368 HRRYAPQTCQYHRGCVHRQRGAQMQLRAFNRNNFSIRYWSWNYR 499
+R+Y + + R R++ + ++ + NN++ ++ NY+
Sbjct: 56 YRKYGETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNNNYK 99
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1
Query: 108 RRKTNIXESICQRCFHQ 58
RR+ N+ E++C F Q
Sbjct: 966 RRRLNVNETVCSDYFSQ 982
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 9.5
Identities = 8/44 (18%), Positives = 23/44 (52%)
Frame = +2
Query: 368 HRRYAPQTCQYHRGCVHRQRGAQMQLRAFNRNNFSIRYWSWNYR 499
+R+Y + + R R++ + ++ + NN++ ++ NY+
Sbjct: 289 YRKYGETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNNNYK 332
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.5
Identities = 8/44 (18%), Positives = 23/44 (52%)
Frame = +2
Query: 368 HRRYAPQTCQYHRGCVHRQRGAQMQLRAFNRNNFSIRYWSWNYR 499
+R+Y + + R R++ + ++ + NN++ ++ NY+
Sbjct: 289 YRKYGETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNNNYK 332
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.5
Identities = 8/44 (18%), Positives = 23/44 (52%)
Frame = +2
Query: 368 HRRYAPQTCQYHRGCVHRQRGAQMQLRAFNRNNFSIRYWSWNYR 499
+R+Y + + R R++ + ++ + NN++ ++ NY+
Sbjct: 289 YRKYGETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNNNYK 332
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.5
Identities = 8/44 (18%), Positives = 23/44 (52%)
Frame = +2
Query: 368 HRRYAPQTCQYHRGCVHRQRGAQMQLRAFNRNNFSIRYWSWNYR 499
+R+Y + + R R++ + ++ + NN++ ++ NY+
Sbjct: 289 YRKYGETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNNNYK 332
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.5
Identities = 8/44 (18%), Positives = 23/44 (52%)
Frame = +2
Query: 368 HRRYAPQTCQYHRGCVHRQRGAQMQLRAFNRNNFSIRYWSWNYR 499
+R+Y + + R R++ + ++ + NN++ ++ NY+
Sbjct: 289 YRKYGETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNNNYK 332
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 9.5
Identities = 8/44 (18%), Positives = 23/44 (52%)
Frame = +2
Query: 368 HRRYAPQTCQYHRGCVHRQRGAQMQLRAFNRNNFSIRYWSWNYR 499
+R+Y + + R R++ + ++ + NN++ ++ NY+
Sbjct: 278 YRKYGETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNNNYK 321
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,587
Number of Sequences: 438
Number of extensions: 4633
Number of successful extensions: 20
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23911269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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