Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0177
(680 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0961 + 26331266-26332151,26332244-26332393,26332761-26333281 33 0.21
07_03_1065 + 23711677-23711837,23711859-23712180,23713071-23713277 32 0.48
02_05_0859 + 32292502-32292979,32293271-32293317,32294134-322942... 32 0.48
04_04_1690 - 35382241-35382553,35382614-35382933,35383601-353851... 31 0.64
02_02_0294 - 8651289-8651395,8651527-8651776 31 0.64
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078 31 1.1
04_01_0460 + 5954548-5954816,5954940-5954997 31 1.1
07_01_0032 + 258788-259201,259297-259462,260938-261443 30 1.5
01_05_0195 - 19111983-19112477,19112646-19113950,19114053-191143... 29 2.6
11_03_0031 - 9094643-9095824,9095945-9096034,9096141-9096216,909... 29 3.4
07_01_0975 + 8223269-8224354 29 3.4
03_06_0118 + 31795050-31796404,31796513-31797083 29 3.4
03_05_1071 + 30133696-30133874,30134294-30135200,30135224-301353... 29 3.4
02_04_0365 - 22384981-22385930,22386298-22386364,22386486-22386545 29 3.4
10_01_0020 + 239026-239514 28 6.0
07_03_1591 + 27967065-27967090,27967236-27968054,27984940-279850... 28 6.0
04_03_0784 - 19610370-19611548,19611830-19611919,19612001-196120... 28 6.0
01_06_0644 + 30821811-30821855,30822707-30822976,30823079-308243... 28 6.0
12_01_0777 - 7095081-7096259,7096636-7096725,7096827-7096902,709... 28 7.9
03_05_0346 + 23335753-23335854,23336268-23336473,23336530-233367... 28 7.9
>06_03_0961 + 26331266-26332151,26332244-26332393,26332761-26333281
Length = 518
Score = 33.1 bits (72), Expect = 0.21
Identities = 37/149 (24%), Positives = 65/149 (43%), Gaps = 6/149 (4%)
Frame = -3
Query: 522 TAGAGLWESRRSLAWSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGFRDNGIDTGS 343
++GAG + S + SN ++S + G G+ + +G S + ++ D+G +GS
Sbjct: 294 SSGAGSFSGSSSGSNSNAGSMSGANS-GAGSSSSAYGASG-----SGSNSMSDSGSSSGS 347
Query: 342 GDNRGRASLVDVQNDLHERSAVS--NGGKRRVSTIAGPTEIGTNS---STMAGPTEI-GS 181
G S S+ S N G +S I P+ GT+S S T + G+
Sbjct: 348 VSASGSGSSNSGAGSGSSSSSWSGSNSGSGTMSGIDAPSSTGTSSTAESNSGSATSVTGA 407
Query: 180 NSLTMAGPTEMGSNSSMMAGPTAIGTKSS 94
NS + + +++S P+ IG S+
Sbjct: 408 NSGSYSSAWSNSNSNSGSTMPSGIGVASN 436
Score = 28.7 bits (61), Expect = 4.5
Identities = 30/146 (20%), Positives = 58/146 (39%)
Frame = -3
Query: 519 AGAGLWESRRSLAWSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGFRDNGIDTGSG 340
AG G + S + S+ + SN + +G + G + + +G +G +GSG
Sbjct: 224 AGGGSYSGSNSGSSSSSGSGSNSNSIGGSGSSSGAGSGSS---ASSGYGGSSSGSMSGSG 280
Query: 339 DNRGRASLVDVQNDLHERSAVSNGGKRRVSTIAGPTEIGTNSSTMAGPTEIGSNSLTMAG 160
+ S + +S G S + +N+ +M+G +S + G
Sbjct: 281 SSSSSGS-----------TGMSYGSSGAGSFSGSSSGSNSNAGSMSGANSGAGSSSSAYG 329
Query: 159 PTEMGSNSSMMAGPTAIGTKSSMMGA 82
+ GSNS +G ++ +S G+
Sbjct: 330 ASGSGSNSMSDSGSSSGSVSASGSGS 355
>07_03_1065 + 23711677-23711837,23711859-23712180,23713071-23713277
Length = 229
Score = 31.9 bits (69), Expect = 0.48
Identities = 25/96 (26%), Positives = 35/96 (36%), Gaps = 1/96 (1%)
Frame = -3
Query: 324 ASLVDVQNDLHERSAVSNGGKRRVSTIAGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMG 145
ASLV +D+ +GG+ RV + G G + +G S AG G
Sbjct: 50 ASLVSSTSDVRHSVGGGDGGRGRVVVVPGEGSGGNGGNGGSGGKAGSGGSGGRAGSAGSG 109
Query: 144 SNSSMMAGPTAIGTKSSMMGAVPATPGLTRPL-VGP 40
N A G + A + RP+ VGP
Sbjct: 110 GNGGRPGNSEATGAADEAVAAPSISCSPARPVHVGP 145
>02_05_0859 +
32292502-32292979,32293271-32293317,32294134-32294205,
32294403-32294495
Length = 229
Score = 31.9 bits (69), Expect = 0.48
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 5/113 (4%)
Frame = -3
Query: 504 WESRRSL--AWSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGFRDNGIDT-GSGDN 334
WE RR + S+ S + + + D +D G D GF GF G G+G +
Sbjct: 46 WERRRGMNKGSSSSSALRRVRSVTDDDLDELRGCM-DLGF-----GFEAAGCPLCGAGRS 99
Query: 333 RGRASL--VDVQNDLHERSAVSNGGKRRVSTIAGPTEIGTNSSTMAGPTEIGS 181
R +L +D+ +H + GG V A P G +SS ++ + +GS
Sbjct: 100 RLVETLPALDLYYAVHGNAGGGGGGAGEVCAAASPCSCGASSSDVSEESPLGS 152
>04_04_1690 - 35382241-35382553,35382614-35382933,35383601-35385164,
35385254-35385372,35385701-35385811,35386068-35386595,
35386702-35386881,35386957-35387556,35387646-35388066,
35388183-35388280,35388372-35389260,35389366-35389544,
35389647-35389763,35389862-35389952,35390578-35390753
Length = 1901
Score = 31.5 bits (68), Expect = 0.64
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = -2
Query: 247 DSGSNGDRYELVDDGRPNGDRFEFVDNGRSDGNGLELIYDGRSDSDRYKVVDDGSSSGNA 68
D G + + + D+ + D EF+D G +G G L G D D ++ SS
Sbjct: 1838 DDGGDDEDIDSGDENDDDDDDAEFIDEGDFEGGGGLLEIMGEEDGDESDIMGSFSSGDEE 1897
Query: 67 G 65
G
Sbjct: 1898 G 1898
>02_02_0294 - 8651289-8651395,8651527-8651776
Length = 118
Score = 31.5 bits (68), Expect = 0.64
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 56 LVSPGVA-GTAPIIDDFVPIAVGPAIIDEFEPISVGP 163
L SP +A G PI+D P GPA+ E PIS P
Sbjct: 36 LASPAMARGDRPILDFVPPRLDGPALCSEIPPISAHP 72
>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
Length = 1034
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +3
Query: 456 C*HYSRCSKPVIVATPIIPHPLSLFLRPLTEYRSMSTCPP*PLSGA 593
C ++RC+KPV +ATP+ L+ + R Y M P P S A
Sbjct: 958 CFVFARCTKPVSLATPVYYADLAAY-RGRLYYEGMMMSQPPPSSAA 1002
>04_01_0460 + 5954548-5954816,5954940-5954997
Length = 108
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = -3
Query: 594 ERPRAVMVDMSTLIDIQLRVSGRVTAGAGLWESRRSLAWSNGSNVSNLDRLGDG-AIDNN 418
E+ +A ++ L+ + G G + + S + + +G G ++DN+
Sbjct: 3 EKLKARFQIIAVLLAFAMVAQAMAIRGTGTTAEQDNTGGSTSAKHTLPQAVGSGTSVDNH 62
Query: 417 HGLSNDFGFVNDNHGFRDNGIDTGSGD 337
H + D NHG D G TG+GD
Sbjct: 63 HAIPRD---QYSNHGGDDGGGSTGTGD 86
>07_01_0032 + 258788-259201,259297-259462,260938-261443
Length = 361
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/79 (26%), Positives = 37/79 (46%)
Frame = -3
Query: 303 NDLHERSAVSNGGKRRVSTIAGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMA 124
NDL A N + ++ ++G IG + A T + SNS + GPT + ++ +
Sbjct: 173 NDLLTIFAKFNFTAKDLAVLSGAHTIG-KAHCSAFSTRLYSNSSSNGGPTLDANYTTALR 231
Query: 123 GPTAIGTKSSMMGAVPATP 67
G +G +++ P TP
Sbjct: 232 GQCKVGDVDTLVDLDPPTP 250
>01_05_0195 - 19111983-19112477,19112646-19113950,19114053-19114322,
19118884-19118950,19119229-19119284,19119530-19119590,
19120181-19120297,19120570-19120682,19120774-19120848,
19121464-19122045,19122056-19122271,19122372-19122497,
19126152-19126190,19126266-19126360,19126423-19126962,
19127102-19127327,19127385-19127437,19127534-19127701,
19128353-19128707,19128785-19128876,19129891-19129993
Length = 1717
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -3
Query: 369 RDNGIDTGSGDNRGRASLVDVQNDLHERSAVSN 271
R G G G RGR++L + D HE SA+S+
Sbjct: 1038 RGGGGRRGRGRGRGRSALAENDMDFHETSALSS 1070
>11_03_0031 -
9094643-9095824,9095945-9096034,9096141-9096216,
9096759-9096976,9097283-9097512,9097617-9097683,
9097863-9098048,9098164-9098295,9098380-9098492,
9098771-9098777
Length = 766
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +2
Query: 116 VGPAIIDEFEP-ISVGPAIVNEFEPISVGPAIVDEFVPISVG 238
+G IDE+ I PA+ F+P+ V VDE + I G
Sbjct: 247 IGATTIDEYRKHIEKDPALERRFQPVKVPEPTVDETIGILKG 288
>07_01_0975 + 8223269-8224354
Length = 361
Score = 29.1 bits (62), Expect = 3.4
Identities = 27/102 (26%), Positives = 38/102 (37%), Gaps = 3/102 (2%)
Frame = -3
Query: 354 DTGSGDNRGRASLVDVQNDLHERS---AVSNGGKRRVSTIAGPTEIGTNSSTMAGPTEIG 184
DTG G + G S + S + S G S P T +GP+ G
Sbjct: 234 DTGYGGSSGSPSSSPSSSPSSSPSGSPSSSPSGSPSGSPAGSPAGGPTAGGPASGPSSYG 293
Query: 183 SNSLTMAGPTEMGSNSSMMAGPTAIGTKSSMMGAVPATPGLT 58
+ S GP+ G+ S GP+ G G P++ G T
Sbjct: 294 AASGPAEGPSSSGAASGPAEGPSPSGAAGPAEG--PSSYGST 333
>03_06_0118 + 31795050-31796404,31796513-31797083
Length = 641
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = -2
Query: 253 VYDSGSNG--DRYELVDDGRPNGDRFEFVDNGRSDGNGLELIYDGRSDSDRYKVV 95
VYD NG D+Y D +P D + NGR GL +YD +D VV
Sbjct: 425 VYDYMPNGSLDKYLYDDKNKPTLDWTQSEMNGRLGDFGLARLYDHGADPQTTHVV 479
>03_05_1071 +
30133696-30133874,30134294-30135200,30135224-30135358,
30135545-30136553,30136699-30136703
Length = 744
Score = 29.1 bits (62), Expect = 3.4
Identities = 36/125 (28%), Positives = 51/125 (40%), Gaps = 1/125 (0%)
Frame = -3
Query: 435 GAIDNNHGLSNDFGFVNDNHGFRDNGIDTGSGDNRGRASLVDVQNDLHERSAVSNGGKRR 256
G+ N HG +N FG G G G N G AV+ G+
Sbjct: 176 GSAGNGHGWNNGFGLNAGPSGGNFAGSHVGFNPNLGFQPFGTASG----HGAVA--GQEI 229
Query: 255 VSTIAGPTEIGTNSSTMAGP-TEIGSNSLTMAGPTEMGSNSSMMAGPTAIGTKSSMMGAV 79
+AG +G + AGP ++G +T GPT G S+ A P A G ++++GA
Sbjct: 230 FKPLAGFPPVG--APVAAGPVAQVGHGPVT-DGPTIQGGAST--AFPPAGG--AAVVGAF 282
Query: 78 PATPG 64
P G
Sbjct: 283 PVAGG 287
>02_04_0365 - 22384981-22385930,22386298-22386364,22386486-22386545
Length = 358
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = -3
Query: 522 TAGAGLWESRRSLAWSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGFRD 364
++G+ W S RS+ S+ + + DG +D+ +++ V+DNH +D
Sbjct: 151 SSGSSAWSSSRSVTDSDDDTGGSPENDDDGVLDDWEAVADALS-VDDNHNHQD 202
>10_01_0020 + 239026-239514
Length = 162
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 154 RRTCHCQRIRTYLRWAC 204
R +CHCQR++ LRW C
Sbjct: 90 RSSCHCQRVK--LRWFC 104
>07_03_1591 + 27967065-27967090,27967236-27968054,27984940-27985022,
27985590-27985744,27985956-27986461,27986551-27986703,
27987146-27987485,27987558-27987822,27987897-27988634,
27989734-27989779,27989849-27990223,27991511-27991567,
27991640-27992438
Length = 1453
Score = 28.3 bits (60), Expect = 6.0
Identities = 27/99 (27%), Positives = 40/99 (40%), Gaps = 5/99 (5%)
Frame = -3
Query: 384 DNHGFRDNGIDTGSGDNRGRASLVDVQNDLHERSAVSNGGKRRVSTIAGPTEIGTNSSTM 205
+N G R G GSG GR +N + E + GG+ + + G +G
Sbjct: 981 NNKGKRKRGRPRGSGVGGGRGRKAVRRNLIDEWAEGPVGGECSMRSEEGWLGVGGGVGVG 1040
Query: 204 AGPTEIGSNS-----LTMAGPTEMGSNSSMMAGPTAIGT 103
G IG S L ++G S+S +AG A+ T
Sbjct: 1041 VGGGVIGQKSTSPANLVVSGFFSAASDSQRLAGKVAVIT 1079
>04_03_0784 -
19610370-19611548,19611830-19611919,19612001-19612076,
19612917-19613134,19613333-19613548,19613974-19614159,
19614242-19614364,19614456-19614571,19615126-19615588
Length = 888
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +2
Query: 116 VGPAIIDEFEP-ISVGPAIVNEFEPISVGPAIVDEFVPISVG 238
+G +DE+ I PA+ F+P+ V VDE + I G
Sbjct: 370 IGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILRG 411
>01_06_0644 +
30821811-30821855,30822707-30822976,30823079-30824383,
30824551-30824692,30824752-30825275
Length = 761
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -3
Query: 369 RDNGIDTGSGDNRGRASLVDVQNDLHERSAVSN 271
R G G G RGR++L + D HE SA S+
Sbjct: 25 RGGGGRRGRGRGRGRSALAENDMDFHETSAPSS 57
>12_01_0777 - 7095081-7096259,7096636-7096725,7096827-7096902,
7097150-7097367,7097502-7097717,7097922-7098107,
7098181-7098303,7098399-7098514,7099254-7099832,
7101485-7101517,7102485-7103679,7103732-7103797,
7104843-7104905,7105328-7105411
Length = 1407
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +2
Query: 116 VGPAIIDEFEP-ISVGPAIVNEFEPISVGPAIVDEFVPISVG 238
+G +DE+ I PA+ F+P+ V VDE + I G
Sbjct: 889 IGATTLDEYRKHIEKDPALERRFQPVRVPEPTVDETIEILRG 930
>03_05_0346 +
23335753-23335854,23336268-23336473,23336530-23336705,
23336832-23337064,23337546-23337963,23338045-23338262,
23338905-23339168
Length = 538
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/69 (23%), Positives = 30/69 (43%)
Frame = -3
Query: 345 SGDNRGRASLVDVQNDLHERSAVSNGGKRRVSTIAGPTEIGTNSSTMAGPTEIGSNSLTM 166
SG A +DV + H+ + S+GG+R + +G + ++ +A G + T
Sbjct: 106 SGVQERNADPIDVSSSTHDDTVQSSGGERFARSESGSDSQHSKTAKLAATCSSGGSECTG 165
Query: 165 AGPTEMGSN 139
E S+
Sbjct: 166 EEAKESSSS 174
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,942,524
Number of Sequences: 37544
Number of extensions: 354473
Number of successful extensions: 1441
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1429
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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