Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0177
         (680 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    26   1.3  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    24   3.9  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    24   3.9  
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    24   5.1  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   6.7  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   8.9  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   8.9  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   8.9  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 27/130 (20%), Positives = 52/130 (40%), Gaps = 6/130 (4%)
 Frame = -3

Query: 507 LWESRRSLAWSNGSNV---SNLDRLGDGAIDNNHGLSNDFGFVNDNHGFRDNGIDTGSGD 337
           +WES   L     +N    SN  + G        G    F     N G   N  + G G+
Sbjct: 23  IWESNSDLYGPLHANYGPGSNNGQEGLKGPGGARGELKQFDLPLGNTGNSGNNNNNGVGN 82

Query: 336 NRGRASLVDV---QNDLHERSAVSNGGKRRVSTIAGPTEIGTNSSTMAGPTEIGSNSLTM 166
           ++ + S V+    + + +  +  +NG     +  +G +    ++S++   +  GS + T 
Sbjct: 83  HQQQPSPVNEGTGKTNNNNNNNNNNGSNTGATVNSGSSNAALSNSSVLNGSNSGSATTTT 142

Query: 165 AGPTEMGSNS 136
             PT  G+ +
Sbjct: 143 TTPTNPGNGN 152


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
 Frame = +3

Query: 285 SSRANHFE-HQPG*-LCPYCPRTRCR 356
           ++R +HF  H P   LCPYCP +  R
Sbjct: 537 TNRWHHFHSHTPQRSLCPYCPASYSR 562


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
 Frame = +3

Query: 285 SSRANHFE-HQPG*-LCPYCPRTRCR 356
           ++R +HF  H P   LCPYCP +  R
Sbjct: 513 TNRWHHFHSHTPQRSLCPYCPASYSR 538


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -3

Query: 150 MGSNSSMMAGPTAIGTKSSMMGAVPATPGLTRPLVG 43
           +G+ SS   G   +G  S + G  P++PG    LVG
Sbjct: 15  LGNGSSSSGGGVGLG--SGIGGTGPSSPGEESALVG 48


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = +3

Query: 468 SRCSKPVIVA-TPIIPHPLSLFLRPLTEYRSMSTC 569
           SRCSKP + + TP  P  LS      +   S S C
Sbjct: 777 SRCSKPSVTSTTPPTPASLSSSSSSSSSASSTSLC 811


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = -2

Query: 166  GRSDGNGLELIYDGRSDSDRYKVVDDGSSSGNAGTHQALSRAGDSNG 26
            G SD + L L+    S++      + G +     +  A ++ GDSNG
Sbjct: 1119 GNSDSSQLSLVNGKGSEATTAPSDNAGGAEVTGDSCAAKAQTGDSNG 1165


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = -2

Query: 166  GRSDGNGLELIYDGRSDSDRYKVVDDGSSSGNAGTHQALSRAGDSNG 26
            G SD + L L+    S++      + G +     +  A ++ GDSNG
Sbjct: 1117 GNSDSSQLSLVNGKGSEATTAPSDNAGGAEVTGDSCAAKAQTGDSNG 1163


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 17/67 (25%), Positives = 27/67 (40%)
 Frame = -3

Query: 333  RGRASLVDVQNDLHERSAVSNGGKRRVSTIAGPTEIGTNSSTMAGPTEIGSNSLTMAGPT 154
            RG   L +V+N+   R   S   KR+VS+++  ++         G    G  S      +
Sbjct: 1432 RGAKDLKEVENEYPVRRTDSIQSKRKVSSLSDRSDNSEPGQISGGEESPGILSDDQPPES 1491

Query: 153  EMGSNSS 133
               SN S
Sbjct: 1492 PCDSNDS 1498


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 594,415
Number of Sequences: 2352
Number of extensions: 12524
Number of successful extensions: 28
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)