Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0177
(680 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 27 0.13
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 26 0.38
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 25 0.88
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 24 1.5
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 6.2
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 6.2
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 6.2
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 6.2
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 6.2
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 6.2
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 6.2
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 6.2
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 6.2
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 6.2
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 22 6.2
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 22 6.2
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 6.2
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.2
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.2
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.2
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.2
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.2
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.2
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 21 8.2
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 8.2
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 8.2
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 21 8.2
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 27.5 bits (58), Expect = 0.13
Identities = 19/69 (27%), Positives = 36/69 (52%)
Frame = -3
Query: 522 TAGAGLWESRRSLAWSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGFRDNGIDTGS 343
TAGA + E+ + SN S ++ + + + +NN+ +N+ N+N+G DNG G+
Sbjct: 210 TAGAVVLETCQRN--SNNSTITAGNANTNASNNNNNNNNNN----NNNNGANDNGNGNGA 263
Query: 342 GDNRGRASL 316
+N +
Sbjct: 264 SNNNNNGDM 272
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 25.8 bits (54), Expect = 0.38
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = -3
Query: 468 SNVSNLDRLGDGAIDNNHGLSNDFGF---VNDNHGFRDNGIDTGSGDN 334
S++ D+L D I LS D VN +HG + +G + GD+
Sbjct: 664 SSIKASDKLKDSRIKTTEKLSTDPNTHFQVNQSHGIKRSGSHSWEGDS 711
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.6 bits (51), Expect = 0.88
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = -3
Query: 429 IDNNHGLSNDFGFVNDNHGFRDN 361
I NN+ LSN++ + N+ + + +N
Sbjct: 82 ISNNNSLSNNYNYNNNYNNYNNN 104
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 118 RTCHHR*VRAHFRRTCHCQR 177
R HH AH RRT H R
Sbjct: 149 RCLHHDIENAHIRRTLHMNR 168
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.2
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = -3
Query: 429 IDNNHGLSNDFGFVNDNHGF 370
I NN+ LSN++ + N+ + +
Sbjct: 82 ISNNNSLSNNYNYNNNYNNY 101
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.2
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = -3
Query: 429 IDNNHGLSNDFGFVNDNHGF 370
I NN+ LSN++ + N+ + +
Sbjct: 82 ISNNNSLSNNYNYNNNYNNY 101
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.2
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = -3
Query: 429 IDNNHGLSNDFGFVNDNHGF 370
I NN+ LSN++ + N+ + +
Sbjct: 82 ISNNNSLSNNYNYNNNYNNY 101
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.2
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = -3
Query: 429 IDNNHGLSNDFGFVNDNHGF 370
I NN+ LSN++ + N+ + +
Sbjct: 82 ISNNNSLSNNYNYNNNYNNY 101
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.2
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = -3
Query: 429 IDNNHGLSNDFGFVNDNHGF 370
I NN+ LSN++ + N+ + +
Sbjct: 82 ISNNNSLSNNYNYNNNYNNY 101
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.2
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = -3
Query: 429 IDNNHGLSNDFGFVNDNHGF 370
I NN+ LSN++ + N+ + +
Sbjct: 82 ISNNNSLSNNYNYNNNYNNY 101
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.2
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = -3
Query: 429 IDNNHGLSNDFGFVNDNHGF 370
I NN+ LSN++ + N+ + +
Sbjct: 82 ISNNNSLSNNYNYNNNYNNY 101
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.2
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = -3
Query: 429 IDNNHGLSNDFGFVNDNHGF 370
I NN+ LSN++ + N+ + +
Sbjct: 82 ISNNNSLSNNYNYNNNYNNY 101
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 6.2
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = -3
Query: 429 IDNNHGLSNDFGFVNDNHGF 370
I NN+ LSN++ + N+ + +
Sbjct: 315 ISNNNSLSNNYNYNNNYNNY 334
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 6.2
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = -3
Query: 429 IDNNHGLSNDFGFVNDNHGF 370
I NN+ LSN++ + N+ + +
Sbjct: 315 ISNNNSLSNNYNYNNNYNNY 334
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 21.8 bits (44), Expect = 6.2
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -3
Query: 372 FRDNGIDTGSGDNRGRASLVDVQNDLHERSAVS 274
F+D I G+ +N G ++ ND+ E+ S
Sbjct: 369 FKDTEILIGNNENEGTYFILYDFNDIFEKDQAS 401
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 21.8 bits (44), Expect = 6.2
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -3
Query: 372 FRDNGIDTGSGDNRGRASLVDVQNDLHERSAVS 274
F+D I G+ +N G ++ ND+ E+ S
Sbjct: 369 FKDTEILIGNNENEGTYFILYDFNDIFEKDQAS 401
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.8 bits (44), Expect = 6.2
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +2
Query: 494 RDSHNPAPAVTLPETLN*ISINVDMSTMTA 583
R H PA + +LP T+ + +T TA
Sbjct: 92 RPLHPPASSTSLPATITTTTTTTTTTTATA 121
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.2
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -2
Query: 235 NGDRYELVDDGRPNGDRFEFVDNG 164
+G++ +LV GD +F+ NG
Sbjct: 135 DGNQVDLVLSSETGGDLSDFITNG 158
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.2
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -2
Query: 235 NGDRYELVDDGRPNGDRFEFVDNG 164
+G++ +LV GD +F+ NG
Sbjct: 135 DGNQVDLVLSSETGGDLSDFITNG 158
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.2
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -2
Query: 235 NGDRYELVDDGRPNGDRFEFVDNG 164
+G++ +LV GD +F+ NG
Sbjct: 135 DGNQVDLVLSSETGGDLSDFITNG 158
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.2
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -2
Query: 235 NGDRYELVDDGRPNGDRFEFVDNG 164
+G++ +LV GD +F+ NG
Sbjct: 135 DGNQVDLVLSSETGGDLSDFITNG 158
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.2
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -2
Query: 235 NGDRYELVDDGRPNGDRFEFVDNG 164
+G++ +LV GD +F+ NG
Sbjct: 135 DGNQVDLVLSSETGGDLSDFITNG 158
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.2
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -2
Query: 235 NGDRYELVDDGRPNGDRFEFVDNG 164
+G++ +LV GD +F+ NG
Sbjct: 135 DGNQVDLVLSSETGGDLSDFITNG 158
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 21.4 bits (43), Expect = 8.2
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3
Query: 294 HERSAVSNGGKRRVSTIAGP 235
HE SA + G + VS + GP
Sbjct: 37 HEASAPAEGKFKTVSKVPGP 56
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 8.2
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -2
Query: 235 NGDRYELVDDGRPNGDRFEFVDNG 164
+G++ +LV GD +F+ NG
Sbjct: 203 DGNQVDLVLSSETGGDLSDFITNG 226
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 8.2
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -2
Query: 235 NGDRYELVDDGRPNGDRFEFVDNG 164
+G++ +LV GD +F+ NG
Sbjct: 203 DGNQVDLVLSSETGGDLSDFITNG 226
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 21.4 bits (43), Expect = 8.2
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 138 SSMMAGPTAIGTKSSMM 88
+S +AG AIGT + MM
Sbjct: 275 NSTLAGGVAIGTAAGMM 291
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,249
Number of Sequences: 438
Number of extensions: 3418
Number of successful extensions: 33
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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