Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0176
         (829 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    25   2.2  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    24   6.6  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   8.7  

>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = +2

Query: 308 VVIGSSSNKRGRVLLYRSGDLFNWEFL 388
           +V+G + ++R RVLL  + ++ NWE +
Sbjct: 265 MVLGQTQDQRQRVLLNVAKEVPNWEII 291


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +3

Query: 399 ENQTATWATCGNVPI 443
           E+Q A   TCGN+PI
Sbjct: 50  EDQLAAIVTCGNLPI 64


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
            protein.
          Length = 1253

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 100  SSTEMTWYCYTRAASL 147
            +STE+ WYC  +A  +
Sbjct: 1014 ASTELNWYCSKKAKDM 1029


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 858,130
Number of Sequences: 2352
Number of extensions: 17904
Number of successful extensions: 37
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 88150236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)