Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0176
         (829 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2350|AAF55417.2|  370|Drosophila melanogaster CG5860-PA...    31   1.9  
AY113530-1|AAM29535.1|  464|Drosophila melanogaster RE60735p pro...    29   7.8  
AE014298-2584|AAN09590.1|  464|Drosophila melanogaster CG12991-P...    29   7.8  
AE014298-2583|AAF48739.2|  464|Drosophila melanogaster CG12991-P...    29   7.8  

>AE014297-2350|AAF55417.2|  370|Drosophila melanogaster CG5860-PA
           protein.
          Length = 370

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = +3

Query: 207 NFRKYEGNPVLSYVPDIQLISETPRFGNSKIIGMLSLAAQAINGEE 344
           N RKY  +   SY+PD +  + T R+G+  ++G LS     I G E
Sbjct: 104 NHRKYNSSRSSSYIPDGR--NFTLRYGSGMVVGYLSKDTMHIAGAE 147


>AY113530-1|AAM29535.1|  464|Drosophila melanogaster RE60735p
           protein.
          Length = 464

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 6   WGHVSSSNLIDWEHLPTALIPETEMCFSGG 95
           WG  + SN++D  H PT   P     + GG
Sbjct: 63  WGPATQSNIMDLTHRPTTTRPVVTPSYGGG 92


>AE014298-2584|AAN09590.1|  464|Drosophila melanogaster CG12991-PB,
           isoform B protein.
          Length = 464

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 6   WGHVSSSNLIDWEHLPTALIPETEMCFSGG 95
           WG  + SN++D  H PT   P     + GG
Sbjct: 63  WGPATQSNIMDLTHRPTTTRPVVTPSYGGG 92


>AE014298-2583|AAF48739.2|  464|Drosophila melanogaster CG12991-PA,
           isoform A protein.
          Length = 464

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 6   WGHVSSSNLIDWEHLPTALIPETEMCFSGG 95
           WG  + SN++D  H PT   P     + GG
Sbjct: 63  WGPATQSNIMDLTHRPTTTRPVVTPSYGGG 92


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,086,436
Number of Sequences: 53049
Number of extensions: 802147
Number of successful extensions: 1875
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1873
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3921660132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)