Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0174
         (819 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0607 + 19168164-19168358,19168594-19168716,19168791-191689...    31   1.5  
01_06_0018 + 25609571-25611061                                         30   1.9  
08_02_1180 + 24980042-24980784,24980874-24981168,24981650-249818...    29   4.4  
08_01_0817 - 7941225-7941330,7941456-7942384,7943498-7943574,794...    29   4.4  
11_06_0207 + 21214631-21216121                                         29   5.9  
03_01_0578 + 4270835-4271482,4271763-4272140,4272353-4272444,427...    28   7.8  

>10_08_0607 +
           19168164-19168358,19168594-19168716,19168791-19168946,
           19169129-19169314,19169467-19169583,19169721-19169774,
           19169854-19169925,19170430-19170535,19170658-19170754,
           19171090-19171184,19172318-19172420,19172699-19172886,
           19174928-19175183,19177187-19177325
          Length = 628

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +3

Query: 6   AATAASQFQFGRTGCCISPLSSGKPSGQ*TVVAICQLYYDFFV 134
           A  AA  FQ+G      SPL + K +G+  V    Q   DFF+
Sbjct: 271 ADAAAIGFQYGSPDAVCSPLINAKKTGRSLVETYAQYVQDFFI 313


>01_06_0018 + 25609571-25611061
          Length = 496

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = -1

Query: 300 RWPDPRCIISIQDSSHGDYVYIFSGEVSGYDESVEVSSDSFTVIVYREDGAASE 139
           RW D +   S+   S G    + + E++    ++++S  +F  I+ RED  ASE
Sbjct: 282 RWLDGKAAGSVVYISFGTIARLLAAELTEIARALQLSGKNFLWIITREDTDASE 335


>08_02_1180 +
           24980042-24980784,24980874-24981168,24981650-24981823,
           24981999-24982187,24982290-24982403,24982517-24982837,
           24983485-24983542,24984216-24984337
          Length = 671

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
 Frame = -2

Query: 416 TSDVSTETKSDNANKLGIVAEGCSQDIDEF----SN*STALTSVGQTLGV*FRSRTPVTA 249
           +SD          + L +VA+ CS D        SN       + QT+G+  +S + +TA
Sbjct: 220 SSDKIASVAKSTVSGLVLVAKSCSNDASRLTFWLSNTVVLREIIAQTIGISCQSSSTITA 279

Query: 248 ITFTSSA 228
           I    SA
Sbjct: 280 INMNGSA 286


>08_01_0817 -
           7941225-7941330,7941456-7942384,7943498-7943574,
           7944911-7945286
          Length = 495

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = -1

Query: 312 RIDERWPDPRCIISIQDSSHGDYVYIFSGEVSGYDESVEVSSDSFTV 172
           RID + P+ R        + G +VYIF G V G     E S  SF +
Sbjct: 418 RIDGQCPNYRSFHGACVDTSGCHVYIFGGMVDGLVHPAEASGLSFHI 464


>11_06_0207 + 21214631-21216121
          Length = 496

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +3

Query: 576 WEISTFIPPAVAVKADAWTMPAPILTPMFSTPNLSGKQ 689
           W    +I P++A KAD W +P  + TP+     L+ ++
Sbjct: 451 WPSPVWITPSIA-KADGWCVPCGVGTPVMGGRELARRE 487


>03_01_0578 +
           4270835-4271482,4271763-4272140,4272353-4272444,
           4272637-4273240
          Length = 573

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -1

Query: 303 ERWPDPRCIISIQDSSHGDYV 241
           E WPD    I + DSSH  YV
Sbjct: 44  ELWPDHGFFIKVSDSSHSTYV 64


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,365,850
Number of Sequences: 37544
Number of extensions: 458361
Number of successful extensions: 1272
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1272
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2244686244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)