BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0174
(819 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein. 29 0.17
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 24 4.9
AY146718-1|AAO12078.1| 149|Anopheles gambiae odorant-binding pr... 23 8.6
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign... 23 8.6
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein. 23 8.6
AF364132-2|AAL35509.1| 411|Anopheles gambiae putative odorant r... 23 8.6
>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
Length = 1152
Score = 29.1 bits (62), Expect = 0.17
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 347 YNLQLRFRAYSHCRTWSRWTHRWY 418
Y+L+ RAY H T+ RW W+
Sbjct: 1000 YDLEPELRAYLHTNTYVRWGDPWF 1023
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 24.2 bits (50), Expect = 4.9
Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +2
Query: 512 DDANIVEVLH-TTAGLIGYDY 571
DDANI ++LH TT GL Y +
Sbjct: 239 DDANINDLLHFTTKGLTMYRF 259
>AY146718-1|AAO12078.1| 149|Anopheles gambiae odorant-binding
protein AgamOBP13 protein.
Length = 149
Score = 23.4 bits (48), Expect = 8.6
Identities = 9/40 (22%), Positives = 20/40 (50%)
Frame = -3
Query: 688 CLPDRFGVENIGVRMGAGIVQASALTATAGGIKVEISQRI 569
C+ ++FGV N G ++ + + K+E+++ I
Sbjct: 74 CMQEQFGVSNGKAFQEDGFIEIAKMLMKGDETKIELAKEI 113
>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
promoter protein.
Length = 1197
Score = 23.4 bits (48), Expect = 8.6
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1
Query: 156 DGAASEGERRSHNR 115
DGA SEG R SH++
Sbjct: 1028 DGAPSEGRRLSHSK 1041
>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
Length = 1459
Score = 23.4 bits (48), Expect = 8.6
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = -3
Query: 784 STENAFSGPEHLSCEL--LRSYCKHSDEL 704
ST N +S P+HL C L LRS S+ L
Sbjct: 179 STNNIWSLPDHLFCSLSGLRSLNISSNRL 207
>AF364132-2|AAL35509.1| 411|Anopheles gambiae putative odorant
receptor Or3 protein.
Length = 411
Score = 23.4 bits (48), Expect = 8.6
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +3
Query: 426 RNSNQPIPHIIALDPSLH 479
RNS +P+ H++ L+ L+
Sbjct: 175 RNSTEPVEHVLHLEEELY 192
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 818,881
Number of Sequences: 2352
Number of extensions: 16152
Number of successful extensions: 38
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86902827
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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