Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0174
         (819 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72503-1|CAA96596.2|  617|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z70206-1|CAA94124.1|  407|Caenorhabditis elegans Hypothetical pr...    28   7.0  

>Z72503-1|CAA96596.2|  617|Caenorhabditis elegans Hypothetical
           protein C26C6.3 protein.
          Length = 617

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = -1

Query: 330 IQQLIDRIDERWPDPRCII--SIQDSSHGDYVYIFSGE 223
           I Q+I  I   W D  CI   ++ DS  GDY+  FSG+
Sbjct: 154 ISQIIAAI-RFWEDSTCITFENVSDSPDGDYIEFFSGQ 190


>Z70206-1|CAA94124.1|  407|Caenorhabditis elegans Hypothetical
           protein C49F8.1 protein.
          Length = 407

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 15/55 (27%), Positives = 23/55 (41%)
 Frame = +2

Query: 467 PISPRLDSQP*NSQPDDANIVEVLHTTAGLIGYDYPLGDLDFYPSGGSGQSGCLD 631
           P+  +  +Q   + PD   +   L +  G  GY  PL   D  P    G+S  +D
Sbjct: 299 PLEVKQSAQTLFNDPDFQMLARSLQSGTGSSGYSNPLSARDIPPCSSDGRSVTID 353


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,672,165
Number of Sequences: 27780
Number of extensions: 365364
Number of successful extensions: 1026
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1026
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)