Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0160
         (480 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-2|CAB02091.1|  578|Caenorhabditis elegans Hypothetical pr...    29   1.3  
U64848-5|AAB04884.1|  330|Caenorhabditis elegans Hypothetical pr...    27   7.0  
AF067608-8|AAC17647.1|  432|Caenorhabditis elegans Eukaryotic in...    27   7.0  
Z32840-5|CAD88215.1|  509|Caenorhabditis elegans Hypothetical pr...    27   9.3  
Z32840-4|CAA83680.1|  460|Caenorhabditis elegans Hypothetical pr...    27   9.3  
Z32840-3|CAB63430.2|  457|Caenorhabditis elegans Hypothetical pr...    27   9.3  

>Z79754-2|CAB02091.1|  578|Caenorhabditis elegans Hypothetical
           protein F25H2.2 protein.
          Length = 578

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 22/69 (31%), Positives = 32/69 (46%)
 Frame = +1

Query: 55  FNLGERDVVFHLFHRGSPQVSXPLLLSVNSIMTYSFSLARRTIFTIHNHGETVAGNFNAF 234
           F+ GE   + +  H  S   S P+  ++ S  T   SL R T+F IH  G  +     + 
Sbjct: 149 FDYGEESSMAY-GHDYSENRSLPV--TIPSYNTVQDSLERYTVFNIHMAGRQLGSRRYSE 205

Query: 235 VIPAHLALK 261
            +  HLALK
Sbjct: 206 FVELHLALK 214


>U64848-5|AAB04884.1|  330|Caenorhabditis elegans Hypothetical
           protein C50E3.9 protein.
          Length = 330

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +3

Query: 15  VCAVTVRCYCSVQFQFGRTGCCISPLSSGKPSGQXTVVAVCQLYYD 152
           +  +++ C   V+  F     CIS +   KPS   ++V    LY D
Sbjct: 138 ISMLSLSCSIGVRILFSTVAICISLVYGSKPSLIKSIVLQLSLYLD 183


>AF067608-8|AAC17647.1|  432|Caenorhabditis elegans Eukaryotic
           initiation factor protein3.E protein.
          Length = 432

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = +3

Query: 111 GQXTVVAVCQLYYDLFVLPRSPHHLHDTQSR*NCRWKLQRFRHTR 245
           G  TV +VC  YY   V    P++L+    +      LQ + H R
Sbjct: 142 GNYTVASVCLYYYRNLVNQADPNYLNALYGKLASEILLQEWEHAR 186


>Z32840-5|CAD88215.1|  509|Caenorhabditis elegans Hypothetical
           protein C07G2.2c protein.
          Length = 509

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 11/34 (32%), Positives = 24/34 (70%)
 Frame = +2

Query: 152 LIRSPSLAAPSSRYTITVKLSLETSTLSSYPLTS 253
           L+RSPS +AP+S   +T  +++ +++ + +P T+
Sbjct: 243 LLRSPSSSAPNSASVLTNAMAIPSTSGAPFPGTT 276


>Z32840-4|CAA83680.1|  460|Caenorhabditis elegans Hypothetical
           protein C07G2.2b protein.
          Length = 460

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 11/34 (32%), Positives = 24/34 (70%)
 Frame = +2

Query: 152 LIRSPSLAAPSSRYTITVKLSLETSTLSSYPLTS 253
           L+RSPS +AP+S   +T  +++ +++ + +P T+
Sbjct: 194 LLRSPSSSAPNSASVLTNAMAIPSTSGAPFPGTT 227


>Z32840-3|CAB63430.2|  457|Caenorhabditis elegans Hypothetical
           protein C07G2.2a protein.
          Length = 457

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 11/34 (32%), Positives = 24/34 (70%)
 Frame = +2

Query: 152 LIRSPSLAAPSSRYTITVKLSLETSTLSSYPLTS 253
           L+RSPS +AP+S   +T  +++ +++ + +P T+
Sbjct: 194 LLRSPSSSAPNSASVLTNAMAIPSTSGAPFPGTT 227


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,082,875
Number of Sequences: 27780
Number of extensions: 188190
Number of successful extensions: 583
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 583
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)