Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0159
         (720 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2F644 Cluster: Triacylglycerol lipase; n=1; Bombyx mor...    40   0.047
UniRef50_Q8IC20 Cluster: Putative uncharacterized protein PF07_0...    34   3.1  
UniRef50_Q5L583 Cluster: Putative TMH-family membrane protein; n...    33   7.1  
UniRef50_Q46194 Cluster: 23S rRNA methlyase; n=1; Clostridium pe...    33   7.1  
UniRef50_A0BSC4 Cluster: Chromosome undetermined scaffold_124, w...    33   7.1  
UniRef50_Q4Z331 Cluster: Transporter, putative; n=3; Plasmodium ...    33   9.4  

>UniRef50_Q2F644 Cluster: Triacylglycerol lipase; n=1; Bombyx
           mori|Rep: Triacylglycerol lipase - Bombyx mori (Silk
           moth)
          Length = 295

 Score = 40.3 bits (90), Expect = 0.047
 Identities = 17/21 (80%), Positives = 18/21 (85%)
 Frame = +3

Query: 540 LLHFRSGMFRVNTGMRYPFHL 602
           L+   SGMFRVNTGMRYPFHL
Sbjct: 275 LVKHGSGMFRVNTGMRYPFHL 295


>UniRef50_Q8IC20 Cluster: Putative uncharacterized protein
           PF07_0020; n=5; Plasmodium|Rep: Putative uncharacterized
           protein PF07_0020 - Plasmodium falciparum (isolate 3D7)
          Length = 1213

 Score = 34.3 bits (75), Expect = 3.1
 Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
 Frame = -3

Query: 349 KNNFCFYTRRMNNLIQLKNYTLRIVNCLRTRTNNLQRKYSI*RDFNGKKH-LIVGSINRY 173
           K NF  +    NNLI +K  TL+     + + NNL++K +I  D+  KK+  I    N  
Sbjct: 63  KENFVSFKDDKNNLISVKPSTLKNSLIFQDKKNNLKKKVTIKGDYIRKKNDEIYLDKNNL 122

Query: 172 FGEI 161
           F EI
Sbjct: 123 FNEI 126


>UniRef50_Q5L583 Cluster: Putative TMH-family membrane protein; n=2;
           Chlamydophila abortus|Rep: Putative TMH-family membrane
           protein - Chlamydophila abortus
          Length = 469

 Score = 33.1 bits (72), Expect = 7.1
 Identities = 18/50 (36%), Positives = 29/50 (58%)
 Frame = -3

Query: 388 QIIDVAE*IKVKFKNNFCFYTRRMNNLIQLKNYTLRIVNCLRTRTNNLQR 239
           +++D+ E I+VK KN   FY  R+ NLI   +  +  V CL ++ +  QR
Sbjct: 249 KVVDLVEEIEVKEKN-LEFYDGRIKNLINQNSDLVATVRCLESKLDKDQR 297


>UniRef50_Q46194 Cluster: 23S rRNA methlyase; n=1; Clostridium
           perfringens|Rep: 23S rRNA methlyase - Clostridium
           perfringens
          Length = 257

 Score = 33.1 bits (72), Expect = 7.1
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = +2

Query: 488 YLMVIKHFFSQNKVTILLASFQVWNVPSKYRHEV--PIPFVMPTKLKTK 628
           Y  +I  F S+N VT++   F  W +P K  ++V   IPF + TK+  K
Sbjct: 73  YGNLINKFKSKNNVTLINKDFLNWKLPKKREYKVFSNIPFYITTKIIKK 121


>UniRef50_A0BSC4 Cluster: Chromosome undetermined scaffold_124,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_124,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 813

 Score = 33.1 bits (72), Expect = 7.1
 Identities = 16/47 (34%), Positives = 29/47 (61%)
 Frame = +3

Query: 333 KQKLFLNFTLIHSATSII*RDIKC*ILYQNNSGFNCVSESMSNPLFI 473
           +Q+LF +F   H +  I+ R ++  +LYQ+ S   C+ E +S+P F+
Sbjct: 290 QQRLFASF---HQSIYILNRQLEQRLLYQHKSDIRCLIEGISDPQFL 333


>UniRef50_Q4Z331 Cluster: Transporter, putative; n=3; Plasmodium
           (Vinckeia)|Rep: Transporter, putative - Plasmodium
           berghei
          Length = 445

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 47/199 (23%), Positives = 84/199 (42%), Gaps = 9/199 (4%)
 Frame = -3

Query: 622 FKFCRHHKWNGYLMPVFTRNIPDLK*SKQDCNFILRKEMFDY-HQIGDSISMNKGFDMDS 446
           F+F +H+  + Y M     N       K D N I   E     ++I +S+  NK  + ++
Sbjct: 253 FEFYKHYIHSNYCMKENNNNK-----IKNDENLIENTEKNKQKYEINNSLKNNKDKNSNN 307

Query: 445 DTQLNPELF*YNIQHLMSR--QIIDVAE*I--KVKFKN----NFCFYTRRMNNLIQLKNY 290
             QLN   + YN  + ++R  +I   +  +    + KN    +F F+    + + Q+ +Y
Sbjct: 308 FYQLNKFPYNYNSTNFLNRHEKINQESHCLYCNYRIKNVNCLSFLFFGITSSFIAQIVSY 367

Query: 289 TLRIVNCLRTRTNNLQRKYSI*RDFNGKKHLIVGSINRYFGEIYGF*LIVR*VSMQSTNS 110
              +   LRTR   +  + +     N +KH+   S   Y   +YGF  + R + +    +
Sbjct: 368 PFLV---LRTRMQTMNNEIATNYLNNERKHIKSCSFILYNIRVYGFKSLYRGIYVNLLKT 424

Query: 109 I*NFSF*CVYHEYIQHKNK 53
           I   S     +EY   K K
Sbjct: 425 IPATSITWFSYEYAMRKLK 443


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 631,804,546
Number of Sequences: 1657284
Number of extensions: 12501246
Number of successful extensions: 26434
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26425
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58264468239
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)