Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0159
         (720 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    27   0.15 
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    27   0.15 
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    22   5.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   5.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   5.8  
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    21   7.6  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -2

Query: 302 VKKLHFENCQLSKDPNK*FATQIFDLTG 219
           + ++HF+ CQ + D N+ F  Q+  + G
Sbjct: 209 ISEIHFDLCQAADDLNRYFEVQVLTIFG 236


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -2

Query: 302 VKKLHFENCQLSKDPNK*FATQIFDLTG 219
           + ++HF+ CQ + D N+ F  Q+  + G
Sbjct: 205 ISEIHFDLCQAADDLNRYFEVQVLTIFG 232


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 57  TSKYTPTSNIFKKYIDSY 4
           T+KY P    F+KY D +
Sbjct: 100 TAKYDPDGIYFEKYKDKF 117


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 527  VTILLASFQVWNVPSKYRHEVPIPFVM 607
            V   +A+FQ+ N  S Y + +PI F M
Sbjct: 932  VGAFVAAFQIDNWTSFYYNIIPILFFM 958


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 527  VTILLASFQVWNVPSKYRHEVPIPFVM 607
            V   +A+FQ+ N  S Y + +PI F M
Sbjct: 932  VGAFVAAFQIDNWTSFYYNIIPILFFM 958


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 527  VTILLASFQVWNVPSKYRHEVPIPFVM 607
            V   +A+FQ+ N  S Y + +PI F M
Sbjct: 932  VGAFVAAFQIDNWTSFYYNIIPILFFM 958


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 527  VTILLASFQVWNVPSKYRHEVPIPFVM 607
            V   +A+FQ+ N  S Y + +PI F M
Sbjct: 932  VGAFVAAFQIDNWTSFYYNIIPILFFM 958


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 595 NGYLMPVFTRNIPD 554
           N  ++ V+TRNIPD
Sbjct: 53  NCLVLNVYTRNIPD 66


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,867
Number of Sequences: 336
Number of extensions: 3671
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)