Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0159
         (720 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92830-6|CAB07359.2|  360|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr...    28   7.7  
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.      28   7.7  

>Z92830-6|CAB07359.2|  360|Caenorhabditis elegans Hypothetical
           protein F11A5.7 protein.
          Length = 360

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
 Frame = -3

Query: 346 NNFCFYTRRMNNLIQLKNYTLRI-VNCLRTRTNNL 245
           NNFC  T  M NLI   N   R    C  T+T  L
Sbjct: 159 NNFCITTEEMENLIWNVNLDARFGTYCTPTKTEKL 193


>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
           protein ZK520.3a protein.
          Length = 1383

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +2

Query: 512 FSQNKVTILLASFQVWNVPSKYRHEVPIPFVMP 610
           F+ +   I+  S   W + S+YRH VP+  + P
Sbjct: 527 FTTSNNYIVYFSLSEWAIVSEYRHVVPVRSIFP 559


>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
           protein ZK520.3a protein.
          Length = 1383

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +2

Query: 512 FSQNKVTILLASFQVWNVPSKYRHEVPIPFVMP 610
           F+ +   I+  S   W + S+YRH VP+  + P
Sbjct: 527 FTTSNNYIVYFSLSEWAIVSEYRHVVPVRSIFP 559


>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
          Length = 1383

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +2

Query: 512 FSQNKVTILLASFQVWNVPSKYRHEVPIPFVMP 610
           F+ +   I+  S   W + S+YRH VP+  + P
Sbjct: 527 FTTSNNYIVYFSLSEWAIVSEYRHVVPVRSIFP 559


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,250,725
Number of Sequences: 27780
Number of extensions: 323481
Number of successful extensions: 673
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)