Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0156
         (834 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    24   1.3  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    24   1.3  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   2.3  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   3.0  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   9.1  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   9.1  

>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = +1

Query: 643 SKGVQYLNEIKDSVVAGFQW-AAKEGVMAE-ENLRGVRFNIYM*HSILM 783
           SK ++Y+N + D  VAGF+  AAK    A+ E + G   N+   H  L+
Sbjct: 184 SKIIEYMNHLVDLGVAGFRVDAAKHMWPADLEAIYGSLKNLNTDHGFLL 232


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -2

Query: 194 AGFLGSTATRTTGDTLNFITFMLWAFLKVVMVPVLTK 84
           +GF     T    D  N++TF    F+ V++  +L K
Sbjct: 32  SGFENFVKTYLVSDFENYVTFFCSLFIVVILKLILAK 68


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = +1

Query: 643 SKGVQYLNEIKDSVVAGFQW-AAKEGVMAE-ENLRGVRFNIYM*HSIL 780
           SK ++Y+N + D  VAGF+  AAK    A+ E + G   N+   H  L
Sbjct: 184 SKIIEYMNHLVDLGVAGFRVDAAKHMWPADLEAIYGSLKNLNTDHGFL 231


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 643 SKGVQYLNEIKDSVVAGFQ 699
           SK ++Y+N + D  VAGF+
Sbjct: 183 SKIIEYMNHLVDLGVAGFR 201


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -3

Query: 277 SPDSSLIHAPWGQI*PDV*DLLLAWADQ 194
           +P     HA W +  P+  D  L W D+
Sbjct: 418 APLGLYFHAAWLKNNPEFLDAFLYWVDE 445


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 13/44 (29%), Positives = 18/44 (40%)
 Frame = -3

Query: 376 TGSDFLIGMQAWSSSRSLRQISRWSSPAPATMCSPDSSLIHAPW 245
           TG +        + S SLR  SRWS    A      + + H P+
Sbjct: 345 TGGNSASNSSGDAQSTSLRPFSRWSLCNSARSNKYPTRVPHRPY 388


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,384
Number of Sequences: 336
Number of extensions: 4903
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22932949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)