Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0154
(759 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0533 + 3868230-3868564,3869040-3869098,3869187-3869225,386... 128 4e-30
06_03_1052 - 27217792-27217846,27218025-27218114,27218191-272182... 124 1e-28
04_04_0306 + 24280773-24280776,24280906-24280929,24281023-242811... 117 9e-27
08_01_0179 + 1519141-1519144,1519278-1519301,1519417-1519517,151... 116 3e-26
02_04_0507 + 23546911-23546953,23547011-23547111,23547695-235478... 114 6e-26
04_04_0120 + 22911863-22911904,22912002-22912112,22912212-229127... 86 3e-17
03_01_0208 + 1642041-1642118,1642200-1642310,1643157-1643318,164... 77 2e-14
01_05_0233 - 19641309-19641871,19650741-19650892,19651193-19651308 35 0.081
04_01_0279 + 3743025-3745169 29 5.3
02_05_0481 + 29361542-29361669,29362091-29362341,29362820-293630... 29 5.3
03_03_0278 - 16126803-16129049 28 7.0
01_06_1600 + 38552396-38552600,38552906-38552928 28 7.0
09_04_0393 + 17255315-17256019,17256107-17257909 28 9.3
06_03_1318 - 29282562-29282566,29282727-29282810,29282913-292833... 28 9.3
03_05_0398 + 23790257-23790323,23791116-23791339,23792208-237922... 28 9.3
02_01_0724 - 5415218-5415280,5415398-5415523,5415614-5415710,541... 28 9.3
>02_01_0533 +
3868230-3868564,3869040-3869098,3869187-3869225,
3869629-3869729,3870288-3870400,3870976-3871075,
3871170-3871316,3871442-3871502,3871616-3871713,
3871786-3871928,3872221-3872304,3872389-3872478,
3872574-3872628
Length = 474
Score = 128 bits (310), Expect = 4e-30
Identities = 58/73 (79%), Positives = 67/73 (91%)
Frame = +2
Query: 254 STTDKASAHLEGGAKKVIISAPSADAPMFVVGVNLEAYDPSFKVISNASCTTNCLAPLAK 433
+TT+KASAHL+GGAKKV+ISAPSADAPMFVVGVN ++YDP V+SNASCTTNCLAPLAK
Sbjct: 239 TTTEKASAHLKGGAKKVVISAPSADAPMFVVGVNEKSYDPKMNVVSNASCTTNCLAPLAK 298
Query: 434 VIHDNFEIVEGLM 472
V+H+ F IVEGLM
Sbjct: 299 VVHEEFGIVEGLM 311
Score = 113 bits (272), Expect = 1e-25
Identities = 55/72 (76%), Positives = 60/72 (83%)
Frame = +1
Query: 511 DGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVR 690
DGPS K WR GRGA QNIIP+STGAAKAVGKV+P LNGKLTGMAFRVP NVSVVDLT R
Sbjct: 325 DGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTCR 384
Query: 691 LGKPASYESHQA 726
+ K ASY+ +A
Sbjct: 385 IEKSASYDDVKA 396
Score = 110 bits (264), Expect = 1e-24
Identities = 56/108 (51%), Positives = 70/108 (64%), Gaps = 2/108 (1%)
Frame = +3
Query: 3 VLR-ASIEKGAQVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVE-VQDGFLVVNGNKIAV 176
VLR A+ +VVA+NDPFI YM Y+FKYDSTHG FKGS++ V D L +NG K+ +
Sbjct: 153 VLRIATSRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGPFKGSIKVVDDSTLEINGKKVTI 212
Query: 177 FSERDPKAIPWGKAGAEYVVESTGVFPLQIKHLLTWREVLKKLLYQLP 320
S+RDP IPWG GAEYVVES+GVF K + KK++ P
Sbjct: 213 TSKRDPADIPWGNFGAEYVVESSGVFTTTEKASAHLKGGAKKVVISAP 260
>06_03_1052 -
27217792-27217846,27218025-27218114,27218191-27218274,
27218526-27218668,27218748-27218845,27218959-27219019,
27219184-27219330,27219428-27219527,27219701-27219813,
27220302-27220402,27220614-27220652,27220739-27220797,
27221027-27221088,27221411-27221506
Length = 415
Score = 124 bits (298), Expect = 1e-28
Identities = 55/73 (75%), Positives = 66/73 (90%)
Frame = +2
Query: 254 STTDKASAHLEGGAKKVIISAPSADAPMFVVGVNLEAYDPSFKVISNASCTTNCLAPLAK 433
+TT+KASAHL+GGA+KV+ISAPSADAPMFVVGVN + Y+PS V+SNASCTTNCLAPLAK
Sbjct: 180 TTTEKASAHLKGGARKVVISAPSADAPMFVVGVNEKNYNPSMNVVSNASCTTNCLAPLAK 239
Query: 434 VIHDNFEIVEGLM 472
++H+ F I EGLM
Sbjct: 240 IVHEEFGIAEGLM 252
Score = 118 bits (283), Expect = 7e-27
Identities = 58/72 (80%), Positives = 61/72 (84%)
Frame = +1
Query: 511 DGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVR 690
DGPS K WR GRGA QNIIP+STGAAKAVGKV+PALNGKLTGMAFRVP NVSVVDLT R
Sbjct: 266 DGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTPNVSVVDLTCR 325
Query: 691 LGKPASYESHQA 726
L K ASYE +A
Sbjct: 326 LEKSASYEDVKA 337
Score = 108 bits (259), Expect = 5e-24
Identities = 52/86 (60%), Positives = 64/86 (74%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 VLRASIEKG-AQVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQD-GFLVVNGNKIAV 176
VLR + + +VVA+NDPFI YM Y+FKYDSTHG FKG+++V D L +NG KI+V
Sbjct: 94 VLRIATNRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGPFKGTIKVVDESTLEINGKKISV 153
Query: 177 FSERDPKAIPWGKAGAEYVVESTGVF 254
S+RDP IPWG GAEYVVES+GVF
Sbjct: 154 TSKRDPSDIPWGNFGAEYVVESSGVF 179
>04_04_0306 +
24280773-24280776,24280906-24280929,24281023-24281123,
24281359-24281502,24281667-24281782,24281869-24281968,
24282068-24282214,24282329-24282389,24282480-24282577,
24283118-24283260,24283374-24283457,24283538-24283627,
24284018-24284063
Length = 385
Score = 117 bits (282), Expect = 9e-27
Identities = 54/70 (77%), Positives = 61/70 (87%)
Frame = +2
Query: 263 DKASAHLEGGAKKVIISAPSADAPMFVVGVNLEAYDPSFKVISNASCTTNCLAPLAKVIH 442
DKA+AHL+GGAKKV+ISAPS DAPMFVVGVN + Y P ++SNASCTTNCLAPLAKVI+
Sbjct: 156 DKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKPDIDIVSNASCTTNCLAPLAKVIN 215
Query: 443 DNFEIVEGLM 472
D F IVEGLM
Sbjct: 216 DRFGIVEGLM 225
Score = 116 bits (278), Expect = 3e-26
Identities = 56/72 (77%), Positives = 61/72 (84%)
Frame = +1
Query: 511 DGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVR 690
DGPS K WR GR A NIIP+STGAAKAVGKV+PALNGKLTGMAFRVP +VSVVDLTVR
Sbjct: 239 DGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTVR 298
Query: 691 LGKPASYESHQA 726
L KPASY+ +A
Sbjct: 299 LEKPASYDQIKA 310
Score = 70.1 bits (164), Expect = 2e-12
Identities = 36/84 (42%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Frame = +3
Query: 75 MVYLFKYDSTHGRFKG-SVEVQDGFLVVNGNK-IAVFSERDPKAIPWGKAGAEYVVESTG 248
+ Y+FKYD+ HG++K V+V+D ++ G K + VF R+P+ IPWG+ GAE+VVESTG
Sbjct: 91 VTYMFKYDTVHGQWKHHEVKVKDSKTLLFGEKEVTVFGCRNPEEIPWGETGAEFVVESTG 150
Query: 249 VFPLQIKHLLTWREVLKKLLYQLP 320
VF + K + KK++ P
Sbjct: 151 VFTDKDKAAAHLKGGAKKVVISAP 174
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +3
Query: 3 VLRASIEKG-AQVVAINDPFIGLDYMVYLF 89
V R +++ ++VA+NDPFI DYM+ F
Sbjct: 18 VARVALQSDDVELVAVNDPFITTDYMICEF 47
>08_01_0179 +
1519141-1519144,1519278-1519301,1519417-1519517,
1519805-1519920,1519944-1520112,1520713-1520859,
1520943-1521003,1521086-1521183,1521608-1521750,
1521980-1522063,1522191-1522280,1522375-1522420
Length = 360
Score = 116 bits (278), Expect = 3e-26
Identities = 52/70 (74%), Positives = 60/70 (85%)
Frame = +2
Query: 263 DKASAHLEGGAKKVIISAPSADAPMFVVGVNLEAYDPSFKVISNASCTTNCLAPLAKVIH 442
+KA+AHL+GGAKKV+ISAPS DAPMFV GVN + Y ++SNASCTTNCLAPLAKVIH
Sbjct: 131 EKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCLAPLAKVIH 190
Query: 443 DNFEIVEGLM 472
DNF I+EGLM
Sbjct: 191 DNFGIIEGLM 200
Score = 107 bits (258), Expect = 7e-24
Identities = 51/69 (73%), Positives = 58/69 (84%)
Frame = +1
Query: 511 DGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVR 690
DGPS K WR GR A NIIP+STGAAKAVGKV+P LNGKLTGM+FRVP +VSVVDLTVR
Sbjct: 214 DGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTVDVSVVDLTVR 273
Query: 691 LGKPASYES 717
+ K ASY++
Sbjct: 274 IEKAASYDA 282
Score = 76.2 bits (179), Expect = 3e-14
Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 26/132 (19%)
Frame = +3
Query: 3 VLRASIE-KGAQVVAINDPFIGLDYMVYLFKYDSTHGRFKGS-VEVQDGFLVVNGNK-IA 173
V R +++ + ++VA+NDPFI DYM Y+FKYD+ HG++K S ++++D ++ G K +
Sbjct: 18 VARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVT 77
Query: 174 VFS-----------------------ERDPKAIPWGKAGAEYVVESTGVFPLQIKHLLTW 284
VF ER+P IPW +AGAEYVVESTGVF + K
Sbjct: 78 VFGISLDESNLFMVASVELMFDPVQFERNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHL 137
Query: 285 REVLKKLLYQLP 320
+ KK++ P
Sbjct: 138 KGGAKKVVISAP 149
>02_04_0507 +
23546911-23546953,23547011-23547111,23547695-23547810,
23547897-23547996,23548027-23548215,23548303-23548363,
23548469-23548566,23548943-23549085,23549228-23549311,
23549423-23549512,23549599-23549644
Length = 356
Score = 114 bits (275), Expect = 6e-26
Identities = 56/72 (77%), Positives = 61/72 (84%)
Frame = +1
Query: 511 DGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVR 690
DGPS K WR GR A NIIP+STGAAKAVGKV+PALNGKLTGMAFRVP +VSVVDLTVR
Sbjct: 210 DGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTVR 269
Query: 691 LGKPASYESHQA 726
L KPASY+ +A
Sbjct: 270 LEKPASYDQIKA 281
Score = 105 bits (253), Expect = 3e-23
Identities = 48/65 (73%), Positives = 55/65 (84%)
Frame = +2
Query: 278 HLEGGAKKVIISAPSADAPMFVVGVNLEAYDPSFKVISNASCTTNCLAPLAKVIHDNFEI 457
H++GGAKKV+ISAPS DAPMFVVGVN + Y ++SNASCTTNCLAPLAKVI+D F I
Sbjct: 132 HMQGGAKKVVISAPSKDAPMFVVGVNEKEYKSDVNIVSNASCTTNCLAPLAKVINDRFGI 191
Query: 458 VEGLM 472
VEGLM
Sbjct: 192 VEGLM 196
Score = 93.5 bits (222), Expect = 2e-19
Identities = 45/87 (51%), Positives = 64/87 (73%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 VLRASIE-KGAQVVAINDPFIGLDYMVYLFKYDSTHGRFKG-SVEVQDGFLVVNGNK-IA 173
V R +++ + ++VA+NDPFI +YM Y+FKYD+ HG++K V+V+D ++ G K +A
Sbjct: 23 VARVALQSEDVELVAVNDPFITTEYMTYMFKYDTVHGQWKHHEVKVKDSKTLIFGTKEVA 82
Query: 174 VFSERDPKAIPWGKAGAEYVVESTGVF 254
VF R+P+ IPW AGAEYVVESTGVF
Sbjct: 83 VFGCRNPEEIPWAAAGAEYVVESTGVF 109
>04_04_0120 +
22911863-22911904,22912002-22912112,22912212-22912764,
22912852-22913354
Length = 402
Score = 85.8 bits (203), Expect = 3e-17
Identities = 38/71 (53%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Frame = +2
Query: 263 DKASAHLEGGAKKVIISAPS-ADAPMFVVGVNLEAYDPSFKVISNASCTTNCLAPLAKVI 439
D A H++ GAKKV+I+AP D P +VVGVN + Y P +ISNASCTTNCLAP K++
Sbjct: 172 DGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADQYSPDEPIISNASCTTNCLAPFVKIL 231
Query: 440 HDNFEIVEGLM 472
F I++G M
Sbjct: 232 DQKFGIIKGTM 242
Score = 69.3 bits (162), Expect = 3e-12
Identities = 34/55 (61%), Positives = 39/55 (70%)
Frame = +1
Query: 535 RDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGK 699
R R A NI+P STGAAKAV V+P L GKL G+A RVP NVSVVDL V++ K
Sbjct: 263 RRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSK 317
Score = 64.1 bits (149), Expect = 1e-10
Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +3
Query: 36 VVAINDPFIGLDYMVYLFKYDSTHGRFKGSVE-VQDGFLVVNGNKIAVFSERDPKAIPWG 212
V+AIND G+ +L KYDST G F V+ V D + V+G I V S+R+P +PWG
Sbjct: 96 VIAINDTG-GVKQASHLLKYDSTLGIFDADVKPVGDNAISVDGKVIKVVSDRNPSNLPWG 154
Query: 213 KAGAEYVVESTGVF 254
+ G + V+E TGVF
Sbjct: 155 ELGIDLVIEGTGVF 168
>03_01_0208 +
1642041-1642118,1642200-1642310,1643157-1643318,
1643433-1643600,1643683-1643843,1643930-1643991,
1644078-1644127,1644247-1644653,1644760-1644895
Length = 444
Score = 76.6 bits (180), Expect = 2e-14
Identities = 38/71 (53%), Positives = 49/71 (69%), Gaps = 3/71 (4%)
Frame = +2
Query: 269 ASAHLEGGAKKVIISAPS--ADAPMFVVGVNLEAYDPSF-KVISNASCTTNCLAPLAKVI 439
A H++ GAKKVII+AP+ AD P +V+GVN Y +ISNASCTTNCLAP K++
Sbjct: 184 AGKHIQAGAKKVIITAPAKGADIPTYVLGVNEGDYSHEVANIISNASCTTNCLAPFVKIL 243
Query: 440 HDNFEIVEGLM 472
+ F IV+G M
Sbjct: 244 DEEFGIVKGTM 254
Score = 66.9 bits (156), Expect = 2e-11
Identities = 33/55 (60%), Positives = 37/55 (67%)
Frame = +1
Query: 535 RDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGK 699
R R A NI+P STGAAKAV V+P L GKL G+A RVP NVSVVDL + K
Sbjct: 275 RRARAAALNIVPTSTGAAKAVALVLPQLKGKLNGIALRVPTPNVSVVDLVINTVK 329
Score = 61.7 bits (143), Expect = 6e-10
Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +3
Query: 33 QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVE-VQDGFLVVNGNKIAVFSERDPKAIPW 209
+VV +ND G+ +L KYDS G FK V+ V D + V+G I V S RDP +PW
Sbjct: 105 EVVVVNDSG-GVRNASHLLKYDSMLGTFKADVKIVDDQTISVDGKLIKVVSNRDPLKLPW 163
Query: 210 GKAGAEYVVESTGVF 254
+ G + V+E TGVF
Sbjct: 164 AELGIDIVIEGTGVF 178
>01_05_0233 - 19641309-19641871,19650741-19650892,19651193-19651308
Length = 276
Score = 34.7 bits (76), Expect = 0.081
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 192 PKAIPWGKAGAEYVVESTGVFPLQIKHLLTWREVLKKLLYQLPVL 326
PK PW K+G E + +TG P ++HL + ++ L+ +L
Sbjct: 71 PKGAPWSKSGEEKIPSATGAVPGYLQHLRVSPDAVRLRLFPFSLL 115
>04_01_0279 + 3743025-3745169
Length = 714
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/48 (29%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +1
Query: 4 CSVLLLKRELKWSL*MTLSSVLTIWFIFS-SMIPPMAVLRAVLRFRMD 144
C V+ ++ L + + T ++V+ WF F+ ++ P+AV A+ FR++
Sbjct: 240 CRVVEMELSLMYDILYTKAAVMHTWFGFAIRVVSPLAVAAALGLFRLE 287
>02_05_0481 + 29361542-29361669,29362091-29362341,29362820-29363002,
29363099-29363206,29363583-29363697,29363781-29364819,
29364904-29365014,29365268-29365326,29366601-29366763,
29367162-29367435,29367530-29367680,29367766-29367877,
29367978-29368143,29368261-29368331,29368474-29368565,
29368721-29368883,29369134-29369205,29369236-29369263,
29369519-29369910,29369991-29370106,29370201-29370498,
29370820-29371139,29371332-29371590,29371985-29372302,
29372423-29372527,29372648-29372776,29374001-29374381,
29374467-29374604,29374949-29375185,29375264-29375569
Length = 2094
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 307 NNFFSTSLQVSRCFICSGKTPVDSTTYSAP 218
N F+ SL+ CF+C+ S TYSAP
Sbjct: 1085 NKIFNISLRNIVCFVCNQTRNAISGTYSAP 1114
>03_03_0278 - 16126803-16129049
Length = 748
Score = 28.3 bits (60), Expect = 7.0
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1
Query: 385 HLKCFLHHKLSCPTCK 432
+LK +L+H L CPTC+
Sbjct: 220 YLKVYLNHNLLCPTCR 235
>01_06_1600 + 38552396-38552600,38552906-38552928
Length = 75
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 493 CYTENFDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPALNGKLTG 636
C + G G WR +G ++ A A+AVGK A G+ +G
Sbjct: 22 CEAGSGGGRGGGRWRPAKGDAMAMMAAERSCARAVGKERRAGGGQRSG 69
>09_04_0393 + 17255315-17256019,17256107-17257909
Length = 835
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 245 WCLSTTDKASAHLEGGAKKVIISAPSADAPMFVVGVNL 358
W ++ D+ AH++G KV A + PM +V L
Sbjct: 458 WLMNLRDEFKAHVDGTLPKVPSEAREEERPMIIVCAKL 495
>06_03_1318 - 29282562-29282566,29282727-29282810,29282913-29283380,
29283735-29283917,29284362-29284467,29284627-29284651,
29284736-29284855,29284920-29284997,29285646-29285774,
29285976-29285989,29286168-29287944,29288344-29288489,
29288921-29291029
Length = 1747
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 304 NFFSTSLQVSRCFICSGKTPVDSTTYSA 221
N F +L++ C I G TP D T+SA
Sbjct: 1078 NMFDAALEILHCMIVEGVTP-DDVTFSA 1104
>03_05_0398 +
23790257-23790323,23791116-23791339,23792208-23792275,
23794738-23794980,23795108-23795237,23797235-23797954
Length = 483
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 463 LNNFKVIMNNLCKWGKTVCGARSI*DDL 380
LN +++L + G T CGARSI DD+
Sbjct: 426 LNENATGVHDLYRGGATACGARSIWDDM 453
>02_01_0724 -
5415218-5415280,5415398-5415523,5415614-5415710,
5415797-5415861,5415964-5416026,5416127-5416197,
5416430-5416489,5416564-5416663,5416863-5416938,
5417284-5417358,5417451-5417575,5417664-5417722,
5418031-5418109,5418303-5418533
Length = 429
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = -3
Query: 310 YNNFFSTSLQVSRC-FICSG-KTPVDSTTYSAPAFPHGMALGSLSEKTAILLPLTTRNPS 137
Y +FF + C FI G +TPV+ + P HG A + T I+ P +P+
Sbjct: 137 YTDFFCSVHHARNCGFIFRGPQTPVNPNWFQLPVGYHGRASSVIVSGTDIIRPKGQGHPT 196
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,151,714
Number of Sequences: 37544
Number of extensions: 459423
Number of successful extensions: 1184
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1176
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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