Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0151
(625 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0409 - 20503480-20503678,20504522-20504717,20504805-205048... 127 8e-30
01_01_0745 + 5769150-5769152,5769268-5769375,5769812-5769854,576... 127 8e-30
05_02_0095 + 6564703-6564705,6564848-6564955,6565153-6565195,656... 103 2e-22
02_02_0195 + 7676014-7676094,7676111-7676218,7676307-7676349,767... 102 2e-22
02_02_0196 + 7685933-7685961,7686086-7686284 53 2e-07
12_01_0108 + 846960-847247,847640-847693 29 2.3
11_04_0418 - 17443989-17444082,17445153-17445406,17445709-174457... 28 6.9
03_04_0079 + 17102623-17102644,17102794-17102897,17104461-171046... 28 6.9
09_04_0480 + 17958726-17958926,17959294-17959382,17960176-179602... 27 9.2
>06_03_0409 -
20503480-20503678,20504522-20504717,20504805-20504847,
20505632-20505739,20505848-20505850
Length = 182
Score = 127 bits (306), Expect = 8e-30
Identities = 61/86 (70%), Positives = 68/86 (79%)
Frame = +3
Query: 249 KDAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIY 428
K A + TVRG KA ++LE GLKV+EYEL R NFS TG FGFGIQEHIDLGIKYDPS GIY
Sbjct: 66 KIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGIY 125
Query: 429 GLDFYVVLGRPGFNVAHRRRKTGKVG 506
G+DFYVVL R G+ VA RRR +VG
Sbjct: 126 GMDFYVVLERAGYRVARRRRCKSRVG 151
Score = 103 bits (246), Expect = 2e-22
Identities = 50/69 (72%), Positives = 56/69 (81%)
Frame = +1
Query: 61 SEDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIR 240
SE N MR + ++KL LNI VGESGDRLTRA+KVLEQL+GQ PVFSKARYTVRSFGIR
Sbjct: 3 SEKKQSNPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFGIR 62
Query: 241 RNEKMLSIV 267
RNEK+ V
Sbjct: 63 RNEKIACYV 71
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +2
Query: 503 GIPHRLTKEDAMKWFQQKYDG 565
GI HR+TKEDAMKWFQ KY+G
Sbjct: 151 GIQHRVTKEDAMKWFQVKYEG 171
>01_01_0745 +
5769150-5769152,5769268-5769375,5769812-5769854,
5769945-5770140,5770836-5771034
Length = 182
Score = 127 bits (306), Expect = 8e-30
Identities = 61/86 (70%), Positives = 68/86 (79%)
Frame = +3
Query: 249 KDAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIY 428
K A + TVRG KA ++LE GLKV+EYEL R NFS TG FGFGIQEHIDLGIKYDPS GIY
Sbjct: 66 KIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGIY 125
Query: 429 GLDFYVVLGRPGFNVAHRRRKTGKVG 506
G+DFYVVL R G+ VA RRR +VG
Sbjct: 126 GMDFYVVLERAGYRVARRRRCKSRVG 151
Score = 102 bits (245), Expect = 2e-22
Identities = 50/69 (72%), Positives = 56/69 (81%)
Frame = +1
Query: 61 SEDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIR 240
SE N MR + ++KL LNI VGESGDRLTRA+KVLEQL+GQ PVFSKARYTVRSFGIR
Sbjct: 3 SEKKQANPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFGIR 62
Query: 241 RNEKMLSIV 267
RNEK+ V
Sbjct: 63 RNEKIACYV 71
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +2
Query: 503 GIPHRLTKEDAMKWFQQKYDG 565
GI HR+TKEDAMKWFQ KY+G
Sbjct: 151 GIQHRVTKEDAMKWFQVKYEG 171
>05_02_0095 +
6564703-6564705,6564848-6564955,6565153-6565195,
6565303-6565409,6566310-6566395,6566396-6566594
Length = 181
Score = 103 bits (246), Expect = 2e-22
Identities = 50/69 (72%), Positives = 56/69 (81%)
Frame = +1
Query: 61 SEDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIR 240
SE N MR + ++KL LNI VGESGDRLTRA+KVLEQL+GQ PVFSKARYTVRSFGIR
Sbjct: 3 SEKKQSNPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFGIR 62
Query: 241 RNEKMLSIV 267
RNEK+ V
Sbjct: 63 RNEKIACYV 71
Score = 63.7 bits (148), Expect = 1e-10
Identities = 40/88 (45%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Frame = +3
Query: 249 KDAVHCTVRGAKAEEILERGLKVREYELRRDNF--SATGNFGFGIQEHIDLGIKYDPSIG 422
K A + TVRG KA ++LE GLK+ DN S T + + +YDPS G
Sbjct: 66 KIACYVTVRGEKAMQLLESGLKIIRIV---DNLIPSVTRSTRAKRINLSNQCFRYDPSTG 122
Query: 423 IYGLDFYVVLGRPGFNVAHRRRKTGKVG 506
IYG+DFYVVL R G+ VA RRR +VG
Sbjct: 123 IYGMDFYVVLERAGYRVARRRRCKSRVG 150
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +2
Query: 503 GIPHRLTKEDAMKWFQQKYDG 565
GI HR+TKEDAMKWFQ KY+G
Sbjct: 150 GIQHRVTKEDAMKWFQVKYEG 170
>02_02_0195 +
7676014-7676094,7676111-7676218,7676307-7676349,
7676449-7676648
Length = 143
Score = 102 bits (245), Expect = 2e-22
Identities = 50/69 (72%), Positives = 56/69 (81%)
Frame = +1
Query: 61 SEDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIR 240
SE N MR + ++KL LNI VGESGDRLTRA+KVLEQL+GQ PVFSKARYTVRSFGIR
Sbjct: 29 SEKKQSNPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIR 88
Query: 241 RNEKMLSIV 267
RNEK+ V
Sbjct: 89 RNEKIACYV 97
Score = 78.2 bits (184), Expect = 5e-15
Identities = 38/52 (73%), Positives = 42/52 (80%)
Frame = +3
Query: 249 KDAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIK 404
K A + TVRG KA ++LE GLKV+EYEL R NFS TG FGFGIQEHIDLGIK
Sbjct: 92 KIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIK 143
>02_02_0196 + 7685933-7685961,7686086-7686284
Length = 75
Score = 52.8 bits (121), Expect = 2e-07
Identities = 23/34 (67%), Positives = 26/34 (76%)
Frame = +3
Query: 405 YDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVG 506
YDPS GIYG+DFYVVL R G+ VA RRR +VG
Sbjct: 11 YDPSTGIYGMDFYVVLERAGYRVARRRRCKSRVG 44
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +2
Query: 503 GIPHRLTKEDAMKWFQQKYDG 565
GI HR+TKEDAMKWFQ KY+G
Sbjct: 44 GIQHRVTKEDAMKWFQVKYEG 64
>12_01_0108 + 846960-847247,847640-847693
Length = 113
Score = 29.5 bits (63), Expect = 2.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 518 GGGESHFSCLTPSVCYVETW 459
GGGESH SC P ++ W
Sbjct: 9 GGGESHLSCADPPELVIQDW 28
>11_04_0418 -
17443989-17444082,17445153-17445406,17445709-17445783,
17446156-17446377,17446789-17446941,17447031-17447167,
17447615-17447933
Length = 417
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3
Query: 249 KDAVHCTVRGAKAEEILERGLK 314
K A + TVRG KA ++LE GLK
Sbjct: 281 KIACYVTVRGEKAMQLLESGLK 302
>03_04_0079 +
17102623-17102644,17102794-17102897,17104461-17104660,
17104864-17105005,17105024-17105290
Length = 244
Score = 27.9 bits (59), Expect = 6.9
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = -1
Query: 175 APTPWRHESACHRIHQHICSS 113
APTP+ ++ A H + H+C++
Sbjct: 63 APTPYENDKALHFLRHHLCAT 83
>09_04_0480 +
17958726-17958926,17959294-17959382,17960176-17960242,
17960329-17960444,17960978-17961044,17961158-17961206,
17961630-17961715,17961825-17962078,17962158-17962213,
17962683-17962768,17963047-17963139,17963790-17964219,
17964338-17964861,17964962-17965190,17965271-17965566
Length = 880
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = -1
Query: 559 IFL-LEPLHSIF-LCEAVGNPTFPVLRLLCATLKPG 458
+FL ++P H I +C A G+ TF +L ++ + KPG
Sbjct: 184 LFLNVQPDHHILDMCAAPGSKTFQLLEMIHQSTKPG 219
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,233,816
Number of Sequences: 37544
Number of extensions: 344774
Number of successful extensions: 948
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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