Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0150
(621 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05092-1|AAC15856.1| 178|Homo sapiens ribosomal protein L11 pro... 159 7e-39
BC018970-1|AAH18970.1| 177|Homo sapiens ribosomal protein L11 p... 159 7e-39
AY871274-1|AAX11430.1| 177|Homo sapiens cell growth-inhibiting ... 159 7e-39
AL451000-5|CAH71474.1| 174|Homo sapiens ribosomal protein L11 p... 159 7e-39
AL451000-3|CAH71472.1| 178|Homo sapiens ribosomal protein L11 p... 159 7e-39
AF432212-1|AAL99919.1| 176|Homo sapiens CLL-associated antigen ... 159 7e-39
AF101385-1|AAD20460.3| 177|Homo sapiens ribosomal protein L11 p... 159 7e-39
X79234-1|CAA55816.1| 178|Homo sapiens ribosomal protein L11 pro... 152 8e-37
AL451000-4|CAH71473.1| 131|Homo sapiens ribosomal protein L11 p... 131 2e-30
AB007171-1|BAA25831.1| 36|Homo sapiens ribosomal protein L11 p... 75 2e-13
U31973-1|AAA96392.1| 858|Homo sapiens phosphodiesterase A' subu... 32 1.4
U20212-1|AAA92886.1| 858|Homo sapiens cone photoreceptor cGMP-p... 32 1.4
AL356214-7|CAH72330.1| 858|Homo sapiens phosphodiesterase 6C, c... 32 1.4
AL157396-4|CAH73839.1| 858|Homo sapiens phosphodiesterase 6C, c... 32 1.4
BC030603-1|AAH30603.2| 860|Homo sapiens armadillo repeat contai... 30 5.7
AL445189-2|CAH71699.1| 703|Homo sapiens RP11-787I22.1 protein. 30 5.7
AL390208-1|CAI16717.2| 867|Homo sapiens armadillo repeat contai... 30 5.7
AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens ... 30 7.6
AK126463-1|BAC86558.1| 559|Homo sapiens protein ( Homo sapiens ... 30 7.6
AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activat... 30 7.6
AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein. 30 7.6
>L05092-1|AAC15856.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 159 bits (386), Expect = 7e-39
Identities = 71/86 (82%), Positives = 80/86 (93%)
Frame = +1
Query: 244 KDCCHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIY 423
K HCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIY
Sbjct: 67 KIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIY 126
Query: 424 GLDFYVVLGRPGFNVAHRRRKTGKVG 501
GLDFYVVLGRPGF++A ++R+TG +G
Sbjct: 127 GLDFYVVLGRPGFSIADKKRRTGCIG 152
Score = 116 bits (280), Expect = 5e-26
Identities = 56/65 (86%), Positives = 58/65 (89%)
Frame = +2
Query: 59 EDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRR 238
+ +N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRR
Sbjct: 5 QGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRR 64
Query: 239 NEKIA 253
NEKIA
Sbjct: 65 NEKIA 69
Score = 38.3 bits (85), Expect = 0.022
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +3
Query: 498 GISPRLTKEDAMKWFQQKYDG 560
G R++KE+AM+WFQQKYDG
Sbjct: 152 GAKHRISKEEAMRWFQQKYDG 172
>BC018970-1|AAH18970.1| 177|Homo sapiens ribosomal protein L11
protein.
Length = 177
Score = 159 bits (386), Expect = 7e-39
Identities = 71/86 (82%), Positives = 80/86 (93%)
Frame = +1
Query: 244 KDCCHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIY 423
K HCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIY
Sbjct: 66 KIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIY 125
Query: 424 GLDFYVVLGRPGFNVAHRRRKTGKVG 501
GLDFYVVLGRPGF++A ++R+TG +G
Sbjct: 126 GLDFYVVLGRPGFSIADKKRRTGCIG 151
Score = 116 bits (280), Expect = 5e-26
Identities = 56/65 (86%), Positives = 58/65 (89%)
Frame = +2
Query: 59 EDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRR 238
+ +N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRR
Sbjct: 4 QGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRR 63
Query: 239 NEKIA 253
NEKIA
Sbjct: 64 NEKIA 68
Score = 38.3 bits (85), Expect = 0.022
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +3
Query: 498 GISPRLTKEDAMKWFQQKYDG 560
G R++KE+AM+WFQQKYDG
Sbjct: 151 GAKHRISKEEAMRWFQQKYDG 171
>AY871274-1|AAX11430.1| 177|Homo sapiens cell growth-inhibiting
protein 34 protein.
Length = 177
Score = 159 bits (386), Expect = 7e-39
Identities = 71/86 (82%), Positives = 80/86 (93%)
Frame = +1
Query: 244 KDCCHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIY 423
K HCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIY
Sbjct: 66 KIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIY 125
Query: 424 GLDFYVVLGRPGFNVAHRRRKTGKVG 501
GLDFYVVLGRPGF++A ++R+TG +G
Sbjct: 126 GLDFYVVLGRPGFSIADKKRRTGCIG 151
Score = 114 bits (275), Expect = 2e-25
Identities = 55/65 (84%), Positives = 57/65 (87%)
Frame = +2
Query: 59 EDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRR 238
+ +N MR L IRKLCLNICVGESGDRL RAAKVLEQLTGQ PVFSKARYTVRSFGIRR
Sbjct: 4 QGEKENPMRELRIRKLCLNICVGESGDRLARAAKVLEQLTGQTPVFSKARYTVRSFGIRR 63
Query: 239 NEKIA 253
NEKIA
Sbjct: 64 NEKIA 68
Score = 38.3 bits (85), Expect = 0.022
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +3
Query: 498 GISPRLTKEDAMKWFQQKYDG 560
G R++KE+AM+WFQQKYDG
Sbjct: 151 GAKHRISKEEAMRWFQQKYDG 171
>AL451000-5|CAH71474.1| 174|Homo sapiens ribosomal protein L11
protein.
Length = 174
Score = 159 bits (386), Expect = 7e-39
Identities = 71/86 (82%), Positives = 80/86 (93%)
Frame = +1
Query: 244 KDCCHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIY 423
K HCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIY
Sbjct: 65 KIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIY 124
Query: 424 GLDFYVVLGRPGFNVAHRRRKTGKVG 501
GLDFYVVLGRPGF++A ++R+TG +G
Sbjct: 125 GLDFYVVLGRPGFSIADKKRRTGCIG 150
Score = 116 bits (280), Expect = 5e-26
Identities = 56/65 (86%), Positives = 58/65 (89%)
Frame = +2
Query: 59 EDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRR 238
+ +N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRR
Sbjct: 3 QGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRR 62
Query: 239 NEKIA 253
NEKIA
Sbjct: 63 NEKIA 67
Score = 30.7 bits (66), Expect = 4.3
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 498 GISPRLTKEDAMKWFQQK 551
G R++KE+AM+WFQQK
Sbjct: 150 GAKHRISKEEAMRWFQQK 167
>AL451000-3|CAH71472.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 159 bits (386), Expect = 7e-39
Identities = 71/86 (82%), Positives = 80/86 (93%)
Frame = +1
Query: 244 KDCCHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIY 423
K HCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIY
Sbjct: 67 KIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIY 126
Query: 424 GLDFYVVLGRPGFNVAHRRRKTGKVG 501
GLDFYVVLGRPGF++A ++R+TG +G
Sbjct: 127 GLDFYVVLGRPGFSIADKKRRTGCIG 152
Score = 116 bits (280), Expect = 5e-26
Identities = 56/65 (86%), Positives = 58/65 (89%)
Frame = +2
Query: 59 EDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRR 238
+ +N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRR
Sbjct: 5 QGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRR 64
Query: 239 NEKIA 253
NEKIA
Sbjct: 65 NEKIA 69
Score = 38.3 bits (85), Expect = 0.022
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +3
Query: 498 GISPRLTKEDAMKWFQQKYDG 560
G R++KE+AM+WFQQKYDG
Sbjct: 152 GAKHRISKEEAMRWFQQKYDG 172
>AF432212-1|AAL99919.1| 176|Homo sapiens CLL-associated antigen
KW-12 protein.
Length = 176
Score = 159 bits (386), Expect = 7e-39
Identities = 71/86 (82%), Positives = 80/86 (93%)
Frame = +1
Query: 244 KDCCHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIY 423
K HCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIY
Sbjct: 65 KIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIY 124
Query: 424 GLDFYVVLGRPGFNVAHRRRKTGKVG 501
GLDFYVVLGRPGF++A ++R+TG +G
Sbjct: 125 GLDFYVVLGRPGFSIADKKRRTGCIG 150
Score = 116 bits (280), Expect = 5e-26
Identities = 56/65 (86%), Positives = 58/65 (89%)
Frame = +2
Query: 59 EDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRR 238
+ +N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRR
Sbjct: 3 QGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRR 62
Query: 239 NEKIA 253
NEKIA
Sbjct: 63 NEKIA 67
Score = 38.3 bits (85), Expect = 0.022
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +3
Query: 498 GISPRLTKEDAMKWFQQKYDG 560
G R++KE+AM+WFQQKYDG
Sbjct: 150 GAKHRISKEEAMRWFQQKYDG 170
>AF101385-1|AAD20460.3| 177|Homo sapiens ribosomal protein L11
protein.
Length = 177
Score = 159 bits (386), Expect = 7e-39
Identities = 71/86 (82%), Positives = 80/86 (93%)
Frame = +1
Query: 244 KDCCHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIY 423
K HCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIY
Sbjct: 66 KIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIY 125
Query: 424 GLDFYVVLGRPGFNVAHRRRKTGKVG 501
GLDFYVVLGRPGF++A ++R+TG +G
Sbjct: 126 GLDFYVVLGRPGFSIADKKRRTGCIG 151
Score = 116 bits (280), Expect = 5e-26
Identities = 56/65 (86%), Positives = 58/65 (89%)
Frame = +2
Query: 59 EDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRR 238
+ +N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRR
Sbjct: 4 QGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRR 63
Query: 239 NEKIA 253
NEKIA
Sbjct: 64 NEKIA 68
Score = 38.3 bits (85), Expect = 0.022
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +3
Query: 498 GISPRLTKEDAMKWFQQKYDG 560
G R++KE+AM+WFQQKYDG
Sbjct: 151 GAKHRISKEEAMRWFQQKYDG 171
>X79234-1|CAA55816.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 152 bits (369), Expect = 8e-37
Identities = 68/86 (79%), Positives = 78/86 (90%)
Frame = +1
Query: 244 KDCCHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIY 423
K HC VRGAKAEEILE+GLKVRE ELR++NFS TGNFGFGIQEHIDLGI+YDPSIGIY
Sbjct: 67 KIAVHCAVRGAKAEEILEKGLKVRELELRKNNFSDTGNFGFGIQEHIDLGIEYDPSIGIY 126
Query: 424 GLDFYVVLGRPGFNVAHRRRKTGKVG 501
GLDFYVVLGRPGF++A ++R+TG +G
Sbjct: 127 GLDFYVVLGRPGFSIADKKRRTGCIG 152
Score = 113 bits (273), Expect = 4e-25
Identities = 55/65 (84%), Positives = 57/65 (87%)
Frame = +2
Query: 59 EDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRR 238
+ +N MR L IRKLCLNICVGESG RLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRR
Sbjct: 5 QGEKENPMRELRIRKLCLNICVGESGGRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRR 64
Query: 239 NEKIA 253
NEKIA
Sbjct: 65 NEKIA 69
Score = 38.3 bits (85), Expect = 0.022
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +3
Query: 498 GISPRLTKEDAMKWFQQKYDG 560
G R++KE+AM+WFQQKYDG
Sbjct: 152 GAKHRISKEEAMRWFQQKYDG 172
>AL451000-4|CAH71473.1| 131|Homo sapiens ribosomal protein L11
protein.
Length = 131
Score = 131 bits (317), Expect = 2e-30
Identities = 60/67 (89%), Positives = 63/67 (94%)
Frame = +1
Query: 244 KDCCHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIY 423
K HCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIY
Sbjct: 65 KIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIY 124
Query: 424 GLDFYVV 444
GLDFYVV
Sbjct: 125 GLDFYVV 131
Score = 116 bits (280), Expect = 5e-26
Identities = 56/65 (86%), Positives = 58/65 (89%)
Frame = +2
Query: 59 EDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRR 238
+ +N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRR
Sbjct: 3 QGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRR 62
Query: 239 NEKIA 253
NEKIA
Sbjct: 63 NEKIA 67
>AB007171-1|BAA25831.1| 36|Homo sapiens ribosomal protein L11
protein.
Length = 36
Score = 74.9 bits (176), Expect = 2e-13
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = +2
Query: 95 IRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSK 202
IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSK
Sbjct: 1 IRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSK 36
>U31973-1|AAA96392.1| 858|Homo sapiens phosphodiesterase A' subunit
protein.
Length = 858
Score = 32.3 bits (70), Expect = 1.4
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +2
Query: 65 NSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSF 226
N +++ LH NI S + A KV E+LT + F KA YTVRS+
Sbjct: 218 NFVSIILRLHHTSYMYNIESRRSQILMWSANKVFEELTDVERQFHKALYTVRSY 271
>U20212-1|AAA92886.1| 858|Homo sapiens cone photoreceptor
cGMP-phosphodiesterase alpha' subunit protein.
Length = 858
Score = 32.3 bits (70), Expect = 1.4
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +2
Query: 65 NSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSF 226
N +++ LH NI S + A KV E+LT + F KA YTVRS+
Sbjct: 218 NFVSIILRLHHTSYMYNIESRRSQILMWSANKVFEELTDVERQFHKALYTVRSY 271
>AL356214-7|CAH72330.1| 858|Homo sapiens phosphodiesterase 6C,
cGMP-specific, cone, alpha prime protein.
Length = 858
Score = 32.3 bits (70), Expect = 1.4
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +2
Query: 65 NSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSF 226
N +++ LH NI S + A KV E+LT + F KA YTVRS+
Sbjct: 218 NFVSIILRLHHTSYMYNIESRRSQILMWSANKVFEELTDVERQFHKALYTVRSY 271
>AL157396-4|CAH73839.1| 858|Homo sapiens phosphodiesterase 6C,
cGMP-specific, cone, alpha prime protein.
Length = 858
Score = 32.3 bits (70), Expect = 1.4
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +2
Query: 65 NSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSF 226
N +++ LH NI S + A KV E+LT + F KA YTVRS+
Sbjct: 218 NFVSIILRLHHTSYMYNIESRRSQILMWSANKVFEELTDVERQFHKALYTVRSY 271
>BC030603-1|AAH30603.2| 860|Homo sapiens armadillo repeat
containing 2 protein.
Length = 860
Score = 30.3 bits (65), Expect = 5.7
Identities = 26/101 (25%), Positives = 50/101 (49%)
Frame = +2
Query: 20 ACVEER*KGEEGSEDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFS 199
AC + EEG+ +K R++ ++ LC + VG L A +L ++ + +
Sbjct: 285 ACTQLHHALEEGNMLGNKFKGRSILLKTLCKLVDVGSDSLSLKLAKIILALKVSRKNLLN 344
Query: 200 KARYTVRSFGIRRNEKIAAIVQSEELKQKKSLRGV*KSENM 322
+ F I RNEK +++Q++ + + SL V +SE++
Sbjct: 345 VCKLI---FKISRNEKNDSLIQNDSILE--SLLEVLRSEDL 380
>AL445189-2|CAH71699.1| 703|Homo sapiens RP11-787I22.1 protein.
Length = 703
Score = 30.3 bits (65), Expect = 5.7
Identities = 26/101 (25%), Positives = 50/101 (49%)
Frame = +2
Query: 20 ACVEER*KGEEGSEDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFS 199
AC + EEG+ +K R++ ++ LC + VG L A +L ++ + +
Sbjct: 127 ACTQLHHALEEGNMLGNKFKGRSILLKTLCKLVDVGSDSLSLKLAKIILALKVSRKNLLN 186
Query: 200 KARYTVRSFGIRRNEKIAAIVQSEELKQKKSLRGV*KSENM 322
+ F I RNEK +++Q++ + + SL V +SE++
Sbjct: 187 VCKLI---FKISRNEKNDSLIQNDSILE--SLLEVLRSEDL 222
>AL390208-1|CAI16717.2| 867|Homo sapiens armadillo repeat
containing 2 protein.
Length = 867
Score = 30.3 bits (65), Expect = 5.7
Identities = 26/101 (25%), Positives = 50/101 (49%)
Frame = +2
Query: 20 ACVEER*KGEEGSEDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFS 199
AC + EEG+ +K R++ ++ LC + VG L A +L ++ + +
Sbjct: 292 ACTQLHHALEEGNMLGNKFKGRSILLKTLCKLVDVGSDSLSLKLAKIILALKVSRKNLLN 351
Query: 200 KARYTVRSFGIRRNEKIAAIVQSEELKQKKSLRGV*KSENM 322
+ F I RNEK +++Q++ + + SL V +SE++
Sbjct: 352 VCKLI---FKISRNEKNDSLIQNDSILE--SLLEVLRSEDL 387
>AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens cDNA
FLJ46149 fis, clone TESTI4000621, moderately similar to
Homo sapiens Snf2-related CBP activator protein (SRCAP).
).
Length = 2427
Score = 29.9 bits (64), Expect = 7.6
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -2
Query: 407 GSYLIPKSMCS*IPKPKLPVAEKLSRRNSYSLTFKPLSRISSALAPRTVQ 258
G L P S P P L A + +++LT P S +S LAP +VQ
Sbjct: 1737 GPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQ 1786
>AK126463-1|BAC86558.1| 559|Homo sapiens protein ( Homo sapiens
cDNA FLJ44499 fis, clone UTERU3000665, highly similar
to Homo sapiens Snf2-related CBP activator protein
(SRCAP). ).
Length = 559
Score = 29.9 bits (64), Expect = 7.6
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -2
Query: 407 GSYLIPKSMCS*IPKPKLPVAEKLSRRNSYSLTFKPLSRISSALAPRTVQ 258
G L P S P P L A + +++LT P S +S LAP +VQ
Sbjct: 386 GPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQ 435
>AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activator
SRCAP protein.
Length = 2971
Score = 29.9 bits (64), Expect = 7.6
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -2
Query: 407 GSYLIPKSMCS*IPKPKLPVAEKLSRRNSYSLTFKPLSRISSALAPRTVQ 258
G L P S P P L A + +++LT P S +S LAP +VQ
Sbjct: 1478 GPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQ 1527
>AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein.
Length = 3053
Score = 29.9 bits (64), Expect = 7.6
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -2
Query: 407 GSYLIPKSMCS*IPKPKLPVAEKLSRRNSYSLTFKPLSRISSALAPRTVQ 258
G L P S P P L A + +++LT P S +S LAP +VQ
Sbjct: 1560 GPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQ 1609
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,030,093
Number of Sequences: 237096
Number of extensions: 1955877
Number of successful extensions: 15426
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 15322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15426
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -