BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= mg--0147 (708 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_01_0789 - 6150257-6151046,6151167-6151390,6151816-6151991,615... 29 2.7 03_02_0882 - 12121917-12124446,12124739-12124919,12125057-121251... 29 2.7 01_06_1263 + 35840502-35841308,35841763-35841969,35842272-358423... 28 8.4 >07_01_0789 - 6150257-6151046,6151167-6151390,6151816-6151991, 6152778-6153801 Length = 737 Score = 29.5 bits (63), Expect = 2.7 Identities = 14/34 (41%), Positives = 16/34 (47%) Frame = +2 Query: 266 GELTGLKPDDDANTNPSKSRASQNLPPDRKCDPL 367 G+ G + DDDA P SQ PP R PL Sbjct: 160 GDAGGRRGDDDAELKPPPPLPSQRPPPSRSPPPL 193 >03_02_0882 - 12121917-12124446,12124739-12124919,12125057-12125134, 12125731-12125764,12125864-12125975,12126053-12126238, 12126505-12126575 Length = 1063 Score = 29.5 bits (63), Expect = 2.7 Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 1/81 (1%) Frame = +2 Query: 257 WLVGELTGLKPDDDANTNPSKSRA-SQNLPPDRKCDPLRRSGEKLSGHQSNCEITPSLIA 433 W G L + + T S S++ S N D + D E S SN +TPS+ Sbjct: 420 WSAGMGDSLNNNSEEKTIDSTSQSKSNNTGSDSEKDGAETQAEPGSASASNTVVTPSVEG 479 Query: 434 LVYNFRTYVLKTLKTGESQHS 496 N + + +T S H+ Sbjct: 480 FHTNMQGVAMPETETAVSSHT 500 >01_06_1263 + 35840502-35841308,35841763-35841969,35842272-35842370, 35843361-35843464,35844521-35844698,35844774-35845244, 35845383-35845523,35846290-35846349,35846427-35846490, 35847295-35847524,35847606-35847704 Length = 819 Score = 27.9 bits (59), Expect = 8.4 Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 2/61 (3%) Frame = -1 Query: 513 VNTNVTECCDSPVFNVLRT*VRKL*TKAINDGVISQFDWC--PLSFSPDLLSGSHFRSGG 340 V NV+ C D + ++ ++++ TKA DG++ +W PL P+ ++ ++ S Sbjct: 349 VGRNVSRCKDDAQRSAVQNILKEIITKATADGILHTKNWDIEPLVPLPENITSTNLTSSA 408 Query: 339 R 337 + Sbjct: 409 K 409 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,024,549 Number of Sequences: 37544 Number of extensions: 276457 Number of successful extensions: 531 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 522 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 531 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1827423340 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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