Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0146
(766 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0873 + 6836746-6836775,6836859-6836918,6837729-6837899,683... 38 0.007
03_02_0148 - 5928703-5928931,5929099-5929171,5929288-5929408,592... 35 0.082
03_01_0644 - 4719954-4720022,4720445-4720912,4721009-4721312,472... 35 0.082
08_02_0530 + 18244933-18245217,18245309-18245383,18246176-182462... 33 0.19
11_06_0109 + 20202629-20205452,20206354-20206578,20207208-202080... 33 0.25
10_08_1015 - 22255135-22255693,22256437-22256836,22257938-222583... 33 0.25
07_03_0117 + 13589997-13590998 33 0.25
05_01_0505 + 4207841-4208455,4209982-4210143,4210247-4210717 33 0.25
01_07_0083 + 40970890-40971015,40971886-40971994,40972679-409727... 33 0.25
09_04_0683 - 19431034-19431495,19431632-19431997,19432055-194323... 33 0.33
02_02_0123 + 7015905-7015928,7015975-7016105,7017675-7017940,701... 33 0.33
11_04_0086 + 13362788-13362937,13363887-13363970,13364233-133642... 32 0.58
05_07_0283 - 28937027-28937110,28937211-28937549,28937641-289377... 32 0.58
05_02_0101 + 6611694-6611834,6612651-6612734,6613035-6613096,661... 31 0.76
03_02_0646 + 10141967-10142476,10143721-10144254 31 1.0
12_01_0019 - 135627-135983,136564-136797,137118-137196,137268-13... 31 1.3
11_01_0021 - 143576-143932,144434-144667,144988-145066,145138-14... 31 1.3
03_02_0489 + 8836306-8836500,8836906-8837082,8837175-8837321,883... 31 1.3
03_02_0469 + 8720119-8720199,8720295-8720372,8720496-8720570,872... 31 1.3
06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627 30 1.8
05_04_0010 - 17132810-17132935,17133017-17133169,17133202-171332... 30 1.8
01_07_0289 + 42540059-42541141 30 1.8
02_01_0768 + 5736778-5737341,5737451-5737612,5738678-5738707 30 2.3
01_05_0099 - 18098169-18098390,18098878-18098972,18099063-180991... 30 2.3
01_03_0118 - 12688137-12688162,12688236-12688395,12689442-126895... 30 2.3
03_02_0681 + 10358224-10359006,10359162-10359272,10360445-10360648 29 3.1
02_01_0763 - 5665010-5665202,5665285-5665375,5665460-5666245,566... 29 3.1
01_01_0282 - 2349336-2349583,2349719-2349786,2349880-2349950,235... 29 3.1
04_04_0575 - 26342697-26342885,26343030-26343165,26343279-263437... 29 4.1
03_06_0500 - 34361139-34362006,34362295-34362818,34362908-343631... 29 4.1
01_07_0386 + 43218686-43218745,43218972-43219190,43219307-432193... 29 4.1
06_03_0691 + 23552437-23552914,23555168-23555953,23556045-235561... 29 5.4
04_04_0048 + 22351788-22352177,22353175-22353711 29 5.4
05_06_0233 + 26599068-26599466,26601214-26601829,26601871-266019... 28 7.1
01_01_0877 - 6878905-6879600,6880696-6880968 28 7.1
11_08_0097 + 28330565-28330645,28330768-28330986,28331066-283311... 28 9.4
07_01_1210 - 11538233-11538349,11538532-11538612,11538697-115387... 28 9.4
01_05_0410 + 21914995-21915168,21915268-21915353,21915446-219156... 28 9.4
>01_01_0873 +
6836746-6836775,6836859-6836918,6837729-6837899,
6838308-6838407,6838619-6838710,6838825-6839013
Length = 213
Score = 38.3 bits (85), Expect = 0.007
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +2
Query: 509 LWRGMIPSVARCVPGVGLYFSSL----HWLKGKMGKSTGDLKAIEAVLLGVVARTMSGIA 676
LWRG S+A VP VG+Y S +W++ S L+ ++ G VAR+++ I
Sbjct: 16 LWRGTAASLALAVPTVGIYLPSYDLLRNWIEEYSDHSFPKLRPYAPLIAGSVARSLACIT 75
Query: 677 LIPITVIK 700
PI + +
Sbjct: 76 CSPIELAR 83
>03_02_0148 -
5928703-5928931,5929099-5929171,5929288-5929408,
5929907-5929952,5930361-5930571,5930837-5930986,
5931122-5931179,5931285-5931400,5931986-5932091
Length = 369
Score = 34.7 bits (76), Expect = 0.082
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 319 FKAFLAGSFSGTFSTVLFQPLDLVKTRLQ 405
F+ L G +G FS L PLD++KTRLQ
Sbjct: 259 FEGLLLGGLAGGFSAYLTTPLDVIKTRLQ 287
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +1
Query: 316 VFKAFLAGSFSGTFSTVLFQPLDLVKTRLQN 408
V++ F+ G+ +G F + P+D +KTRLQ+
Sbjct: 36 VWREFVWGAIAGAFGEGMMHPVDTLKTRLQS 66
>03_01_0644 -
4719954-4720022,4720445-4720912,4721009-4721312,
4722321-4722745
Length = 421
Score = 34.7 bits (76), Expect = 0.082
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +1
Query: 319 FKAFLAGSFSGTFSTVLFQPLDLVKTRLQNPNHHVMAATVNCA 447
F+ F+AG+ +G +T+L P+D ++TR+ P + + A
Sbjct: 221 FERFIAGAAAGVTATILCIPMDTIRTRMVAPGGEALGGVIGVA 263
>08_02_0530 +
18244933-18245217,18245309-18245383,18246176-18246292,
18246503-18246631,18246726-18246785,18247271-18247441,
18247596-18247689,18247860-18247951,18248071-18248220,
18248407-18248465,18249735-18249864
Length = 453
Score = 33.5 bits (73), Expect = 0.19
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Frame = +2
Query: 509 LWRGMIPSVARCVPGVGLYFSSL----HWLKGKMGKSTGDLKAIEAVLLGVVARTMSGIA 676
LWRG +A VP VG+Y +W++ + L ++ G VAR+++ IA
Sbjct: 208 LWRGTNAGLALAVPTVGIYLPCYDLFRNWIEDFTQSNAPGLTPYAPLVAGSVARSLACIA 267
Query: 677 LIPITVIK 700
PI + +
Sbjct: 268 CSPIELAR 275
>11_06_0109 + 20202629-20205452,20206354-20206578,20207208-20208091,
20208692-20208814
Length = 1351
Score = 33.1 bits (72), Expect = 0.25
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +2
Query: 518 GMIPSVARCVPG-VGLYFSSLHWLKGKMGKSTGDLKAIEAV 637
G IP C+ G V L SS H LKGK+ + GD+K++E++
Sbjct: 1141 GGIPDQVTCLDGLVNLNLSSNH-LKGKIPDNVGDMKSVESL 1180
>10_08_1015 -
22255135-22255693,22256437-22256836,22257938-22258371,
22259586-22259977
Length = 594
Score = 33.1 bits (72), Expect = 0.25
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +2
Query: 509 LWRGMIPSVARCVPG----VGLYFSSLHWLKGKMGKSTGDLKAIEAVLLGVVARTMSGIA 676
L++G++P++ R VPG G+Y + +L G G+ T +L +L G +A + ++
Sbjct: 169 LFKGLVPTMGREVPGNAVMFGVYEGTKQYLAG--GQDTSNLGRGSLILSGGLAGAVFWLS 226
Query: 677 LIPITVIK 700
+ P V+K
Sbjct: 227 VYPTDVVK 234
>07_03_0117 + 13589997-13590998
Length = 333
Score = 33.1 bits (72), Expect = 0.25
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Frame = +2
Query: 482 HNPSGANRWLWRGMIPSVARCVPGVGLYFSSLHWLKGKMGKSTGD-----LKAIEAVLLG 646
+ G R ++RG+ PS+AR +P GL F LK ++ + + + V G
Sbjct: 186 YREGGGVRGVYRGLCPSLARVLPMSGLNFCVYEALKAQIPREEEEHGARGWRRAAKVACG 245
Query: 647 VVARTMSGIALIPITVIK 700
V A ++ A P+ V++
Sbjct: 246 VAAGLVASTATYPLDVVR 263
>05_01_0505 + 4207841-4208455,4209982-4210143,4210247-4210717
Length = 415
Score = 33.1 bits (72), Expect = 0.25
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +1
Query: 313 PVFKAFLAGSFSGTFSTVLFQPLDLVKTRL 402
P+ + +AG+F+G ST+ PL+L+KTRL
Sbjct: 227 PLPPSLVAGAFAGVSSTLCTYPLELIKTRL 256
>01_07_0083 +
40970890-40971015,40971886-40971994,40972679-40972790,
40972944-40973100,40973609-40973761,40974143-40974292,
40974803-40974999,40975446-40975473
Length = 343
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +1
Query: 319 FKAFLAGSFSGTFSTVLFQPLDLVKTRLQ 405
F+ FL G +GTFS PLD+VK R Q
Sbjct: 241 FQLFLCGFAAGTFSKAACHPLDVVKKRFQ 269
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 331 LAGSFSGTFSTVLFQPLDLVKTRLQ 405
LAG+ SG S + PLD++K R Q
Sbjct: 18 LAGAISGGISRTVTSPLDVIKIRFQ 42
>09_04_0683 -
19431034-19431495,19431632-19431997,19432055-19432326,
19433621-19433686,19433924-19433978,19434509-19434577,
19435200-19435307,19435394-19435462,19435883-19436038,
19436089-19436229,19436514-19436568,19437103-19437233,
19437382-19437486
Length = 684
Score = 32.7 bits (71), Expect = 0.33
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Frame = +2
Query: 503 RWLWRGMIPSVAR-CVPGVG--LYFSSLHWLKGKM-GKSTG--DLKAIEAVLLGVVARTM 664
R W+G+IP++ C P + +Y + L+ K GK +L A+E LLG +A+
Sbjct: 207 RGFWKGLIPTLIMVCNPSIQFMIYETLAKRLRSKRSGKELPKKNLTAMEVFLLGAIAKLG 266
Query: 665 SGIALIPITVIK 700
+ + P+ V+K
Sbjct: 267 ATVVTYPLLVVK 278
>02_02_0123 +
7015905-7015928,7015975-7016105,7017675-7017940,
7018239-7018327,7018716-7018811,7018874-7018969,
7019121-7019251,7020123-7020177,7020645-7020800,
7021238-7021306,7021392-7021499,7022128-7022196,
7022743-7022797,7023031-7023227
Length = 513
Score = 32.7 bits (71), Expect = 0.33
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Frame = +2
Query: 503 RWLWRGMIPSVAR-CVPGVG--LYFSSLHWLKGKM-GKSTG--DLKAIEAVLLGVVARTM 664
R W+G+IP++ C P + +Y + L+ K GK +L A+E LLG +A+
Sbjct: 359 RGFWKGLIPTLIMVCNPSIQFMIYETLAKRLRSKRSGKELPKKNLTAMEVFLLGAIAKLG 418
Query: 665 SGIALIPITVIK 700
+ + P+ V+K
Sbjct: 419 ATVVTYPLLVVK 430
>11_04_0086 +
13362788-13362937,13363887-13363970,13364233-13364294,
13365146-13365507,13365928-13366142,13366236-13366292
Length = 309
Score = 31.9 bits (69), Expect = 0.58
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 322 KAFLAGSFSGTFSTVLFQPLDLVKTRLQ 405
K F G SG +T + QP+D+VK R+Q
Sbjct: 27 KPFANGGASGMLATCVIQPIDMVKVRIQ 54
>05_07_0283 -
28937027-28937110,28937211-28937549,28937641-28937754,
28937843-28937955,28939050-28939087,28939315-28939478,
28939746-28939794,28940986-28941152
Length = 355
Score = 31.9 bits (69), Expect = 0.58
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Frame = +2
Query: 503 RWLWRGMIPSVARCVPGVGLYFSSLHWLKG--------KMGKSTGDLKAIEAVLLGVVAR 658
R L+RG +PSV VP VGL F+ LK +GK +L + + G VA
Sbjct: 202 RALYRGWLPSVIGVVPYVGLNFAVYESLKDWLLQTNPYDLGKD-NELHVVTRLGCGAVAG 260
Query: 659 TMSGIALIPITVIK 700
T+ P+ VI+
Sbjct: 261 TIGQTVAYPLDVIR 274
>05_02_0101 +
6611694-6611834,6612651-6612734,6613035-6613096,
6613304-6613322
Length = 101
Score = 31.5 bits (68), Expect = 0.76
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 322 KAFLAGSFSGTFSTVLFQPLDLVKTRLQ 405
K F+ G SG +T + QP+D+VK ++Q
Sbjct: 24 KPFVNGGASGMLATCVIQPIDMVKVKIQ 51
>03_02_0646 + 10141967-10142476,10143721-10144254
Length = 347
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +1
Query: 313 PVFKAFLAGSFSGTFSTVLFQPLDLVKTRLQ 405
P KA AGS G QP+D++KTRLQ
Sbjct: 39 PYVKA-AAGSVGGVMEACCLQPIDVIKTRLQ 68
>12_01_0019 -
135627-135983,136564-136797,137118-137196,137268-137383,
137847-137991,138177-138594,138644-138649,139315-139945
Length = 661
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 316 VFKAFLAGSFSGTFSTVLFQPLDLVKTRLQ 405
V K+ LAG + ST + P+D +KTR+Q
Sbjct: 375 VLKSALAGGLASALSTSVMHPIDSMKTRVQ 404
>11_01_0021 -
143576-143932,144434-144667,144988-145066,145138-145253,
145717-145861,146048-146465,147206-147869
Length = 670
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 316 VFKAFLAGSFSGTFSTVLFQPLDLVKTRLQ 405
V K+ LAG + ST + P+D +KTR+Q
Sbjct: 384 VLKSALAGGLASALSTSVMHPIDSMKTRVQ 413
>03_02_0489 +
8836306-8836500,8836906-8837082,8837175-8837321,
8837636-8837737,8837824-8837894,8837992-8838059,
8838595-8838836
Length = 333
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 503 RWLWRGMIPSVARCVPGVGLYFSSLHWLKGKMGKSTGD 616
R L+RG++P + VP VG+ F + LK + + D
Sbjct: 295 RGLYRGILPEYCKVVPSVGIVFMTYETLKSILTELASD 332
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 313 PVFKAFLAGSFSGTFSTVLFQPLDLVKTRLQ 405
PV + GS SG S+ + PLDLV+ R+Q
Sbjct: 236 PVLISLACGSLSGIASSTITFPLDLVRRRMQ 266
>03_02_0469 +
8720119-8720199,8720295-8720372,8720496-8720570,
8720666-8720796,8720948-8721002,8721107-8721217,
8721538-8721606,8721687-8721794,8722106-8722174,
8722266-8722320,8722499-8722701
Length = 344
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Frame = +2
Query: 512 WRGMIPSVARCV-PGVG--LYFSSLHWLKGKMG---KSTGDLKAIEAVLLGVVARTMSGI 673
W+G++P++ P + LY + L LK + K L A+E LLG VA+ + +
Sbjct: 191 WKGVVPALIMVSNPAIQFMLYETLLKKLKKRRASNLKGADGLTALEIFLLGAVAKLGATV 250
Query: 674 ALIPITVIK 700
P+ V+K
Sbjct: 251 VTYPLLVVK 259
>06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627
Length = 419
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 313 PVFKAFLAGSFSGTFSTVLFQPLDLVKTRL 402
P + +AG+ +G ST+ PL+L+KTRL
Sbjct: 229 PFPPSLIAGALAGVSSTLCTYPLELIKTRL 258
>05_04_0010 -
17132810-17132935,17133017-17133169,17133202-17133263,
17133384-17133435,17133794-17133883,17134075-17134170,
17134258-17134311,17134575-17134665,17134996-17135072,
17135770-17135852,17136057-17136111
Length = 312
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 331 LAGSFSGTFSTVLFQPLDLVKTRLQNPNHHVMAAT-VNCAD 450
L G+F+G + + PLD++KTRL N+ +T V AD
Sbjct: 194 LIGAFAGAITGAITTPLDVMKTRLMVQNNTSFLSTPVGIAD 234
>01_07_0289 + 42540059-42541141
Length = 360
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 322 KAFLAGSFSGTFSTVLFQPLDLVKTRL 402
++ L G+ +G S L PLD+VKTRL
Sbjct: 254 ESVLCGALAGAISAALTTPLDVVKTRL 280
>02_01_0768 + 5736778-5737341,5737451-5737612,5738678-5738707
Length = 251
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 313 PVFKAFLAGSFSGTFSTVLFQPLDLVKTRL 402
P+ +AG+ +G ST+ P++LVKTRL
Sbjct: 210 PIPVPLVAGALAGVASTLCTYPMELVKTRL 239
>01_05_0099 -
18098169-18098390,18098878-18098972,18099063-18099131,
18099277-18099352,18101412-18101524,18104137-18104185,
18104540-18104572,18105446-18105552,18106892-18106990,
18107122-18107203
Length = 314
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 331 LAGSFSGTFSTVLFQPLDLVKTRLQ 405
+AG +G S + PLD++KTRLQ
Sbjct: 22 IAGGSAGVISATVLCPLDVIKTRLQ 46
>01_03_0118 -
12688137-12688162,12688236-12688395,12689442-12689583,
12689680-12689876,12690374-12690755,12692317-12692399
Length = 329
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 334 AGSFSGTFSTVLFQPLDLVKTRLQ 405
AG+ +G S+++ P+D +KTRLQ
Sbjct: 245 AGTIAGACSSIITTPIDTIKTRLQ 268
>03_02_0681 + 10358224-10359006,10359162-10359272,10360445-10360648
Length = 365
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 292 DIVTNYHPVFKAFLAGSFSGTFSTVLFQPLDLVKTRLQ 405
D+ TN + AG+ +G + + PLD+VKT+LQ
Sbjct: 222 DMATNEDSLAVHATAGAAAGALAAAVTTPLDVVKTQLQ 259
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/69 (24%), Positives = 27/69 (39%)
Frame = +2
Query: 494 GANRWLWRGMIPSVARCVPGVGLYFSSLHWLKGKMGKSTGDLKAIEAVLLGVVARTMSGI 673
G R L+RG+ P +YFS + K ++ + G GV+A S
Sbjct: 94 GGVRALYRGLPAMALGAGPAHAVYFSVYEFAKSRLSERLGPNNPAAHAASGVLATIASDA 153
Query: 674 ALIPITVIK 700
P+ +K
Sbjct: 154 VFTPMDTVK 162
>02_01_0763 -
5665010-5665202,5665285-5665375,5665460-5666245,
5667745-5668225
Length = 516
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 331 LAGSFSGTFSTVLFQPLDLVKTRLQ 405
+AG +G + P+DLVKTRLQ
Sbjct: 333 MAGGLAGAVAQTAIYPIDLVKTRLQ 357
>01_01_0282 -
2349336-2349583,2349719-2349786,2349880-2349950,
2350022-2350123,2350309-2350449,2350540-2350716,
2352228-2352338
Length = 305
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 313 PVFKAFLAGSFSGTFSTVLFQPLDLVKTRLQ 405
P + +GS SG S+ PLDLVK R+Q
Sbjct: 206 PAVVSLFSGSLSGIASSTATFPLDLVKRRMQ 236
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 503 RWLWRGMIPSVARCVPGVGLYFSSLHWLKGKMGKSTGD 616
R +RG++P + VP VG+ F + LK + D
Sbjct: 265 RGFYRGIVPEYLKVVPSVGIAFMTYETLKSLLSSIDED 302
>04_04_0575 -
26342697-26342885,26343030-26343165,26343279-26343795,
26344286-26344381,26344933-26345011,26345329-26345712
Length = 466
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +1
Query: 304 NYHPVFKAFLAGSFSGTFSTVLFQPLDLVKTRLQNPNHHVMAAT 435
NY +A LAG +G +VL P +L+K R Q + M AT
Sbjct: 192 NYVSYSEAMLAGIAAGAVESVLCTPFELLKLRSQVGSVKPMKAT 235
>03_06_0500 -
34361139-34362006,34362295-34362818,34362908-34363125,
34363259-34363406
Length = 585
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +1
Query: 298 VTNYHPVFKAFLAGSFSGTFSTVLFQPL 381
VT P+ FLA + G FSTVLF L
Sbjct: 91 VTTLMPLVGGFLADGYLGRFSTVLFSTL 118
>01_07_0386 +
43218686-43218745,43218972-43219190,43219307-43219391,
43219583-43219713,43219802-43219900,43219984-43220088,
43220190-43220264,43222006-43222092,43222129-43222173
Length = 301
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +1
Query: 292 DIVTNYHPVFKAFLAGSFSGTFSTVLFQPLDLVKTRLQ 405
D V +F LA +G + V+ P DLVK RLQ
Sbjct: 103 DTVAGGVSLFAKILAALMTGVIAIVVANPTDLVKVRLQ 140
>06_03_0691 +
23552437-23552914,23555168-23555953,23556045-23556135,
23556214-23556406
Length = 515
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 331 LAGSFSGTFSTVLFQPLDLVKTRLQ 405
+AG +G + P+DLVKTRLQ
Sbjct: 332 VAGGLAGAVAQTAIYPVDLVKTRLQ 356
>04_04_0048 + 22351788-22352177,22353175-22353711
Length = 308
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 331 LAGSFSGTFSTVLFQPLDLVKTRLQ 405
LAG SG + V+ P DL+K R+Q
Sbjct: 120 LAGGVSGVVAQVVASPADLIKVRMQ 144
>05_06_0233 +
26599068-26599466,26601214-26601829,26601871-26601917,
26602101-26602268
Length = 409
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 328 FLAGSFSGTFSTVLFQPLDLVKTRL 402
F+AG+ +G + VL PLD+ TRL
Sbjct: 159 FIAGAAAGCTTLVLIYPLDIAHTRL 183
>01_01_0877 - 6878905-6879600,6880696-6880968
Length = 322
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 331 LAGSFSGTFSTVLFQPLDLVKTRLQ 405
LAG +G T++ P++LVK RLQ
Sbjct: 123 LAGVGTGALQTLILSPVELVKIRLQ 147
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 322 KAFLAGSFSGTFSTVLFQPLDLVKTRLQNP 411
K F+AG G + PLD ++ RLQ P
Sbjct: 14 KEFVAGGVGGMAGVLAGHPLDTLRIRLQQP 43
>11_08_0097 +
28330565-28330645,28330768-28330986,28331066-28331144,
28331222-28331355,28331447-28331545,28331638-28331742,
28332377-28332451,28333671-28333757,28333854-28333889
Length = 304
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 313 PVFKAFLAGSFSGTFSTVLFQPLDLVKTRLQ 405
P+ K AG +G + + P DLVK RLQ
Sbjct: 115 PLTKKIAAGFTTGAIAISIANPTDLVKVRLQ 145
>07_01_1210 -
11538233-11538349,11538532-11538612,11538697-11538758,
11539108-11539159,11539779-11539868,11539957-11540052,
11540127-11540180,11540314-11540404,11540731-11540807,
11541089-11541171,11541441-11541492
Length = 284
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 316 VFKAFLAGSFSGTFSTVLFQPLDLVKTRLQ 405
+F+ +AG +G P+D +KTRLQ
Sbjct: 16 LFEGVIAGGAAGVVVETALYPIDTIKTRLQ 45
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 331 LAGSFSGTFSTVLFQPLDLVKTRL 402
L G+F+G + + PLD++KTRL
Sbjct: 193 LIGAFAGAITGAITTPLDVLKTRL 216
>01_05_0410 +
21914995-21915168,21915268-21915353,21915446-21915656,
21915869-21915998,21916740-21916924,21917014-21917145,
21917329-21917433
Length = 340
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 313 PVF-KAFLAGSFSGTFSTVLFQPLDLVKTRLQNPNH 417
PV+ K +AG +G F+ PL+ VK LQ H
Sbjct: 27 PVYAKELIAGGAAGAFAKTAVAPLERVKILLQTRTH 62
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,755,230
Number of Sequences: 37544
Number of extensions: 434960
Number of successful extensions: 1181
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1178
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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