Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0141
(734 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 126 6e-28
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 118 1e-25
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 114 2e-24
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 109 5e-23
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 108 2e-22
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 105 9e-22
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 105 1e-21
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 105 1e-21
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 104 2e-21
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 104 2e-21
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 104 3e-21
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 104 3e-21
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 101 1e-20
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 101 2e-20
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 101 2e-20
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 101 2e-20
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 100 4e-20
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 99 1e-19
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 99 1e-19
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 96 7e-19
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 95 1e-18
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 95 1e-18
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 95 1e-18
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 93 8e-18
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 93 8e-18
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 92 1e-17
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 92 1e-17
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 91 3e-17
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 90 5e-17
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 89 1e-16
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 88 2e-16
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 87 3e-16
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 87 3e-16
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 85 1e-15
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 85 1e-15
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 82 2e-14
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 82 2e-14
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 81 2e-14
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 80 5e-14
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 79 1e-13
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 78 3e-13
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 73 6e-12
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 72 2e-11
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 72 2e-11
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 70 5e-11
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 66 8e-10
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 65 1e-09
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 65 1e-09
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 65 1e-09
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 65 2e-09
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 65 2e-09
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 64 3e-09
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 63 6e-09
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 63 6e-09
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 63 6e-09
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 63 8e-09
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 62 1e-08
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 62 1e-08
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 62 1e-08
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 61 3e-08
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 60 6e-08
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 60 6e-08
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 60 7e-08
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 59 1e-07
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 59 1e-07
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 59 1e-07
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 58 2e-07
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 58 2e-07
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 57 4e-07
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 57 4e-07
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 57 5e-07
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 57 5e-07
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 57 5e-07
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 56 9e-07
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 56 9e-07
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 55 2e-06
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 55 2e-06
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 55 2e-06
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 55 2e-06
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 55 2e-06
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 54 3e-06
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 54 5e-06
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 54 5e-06
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 54 5e-06
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 54 5e-06
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 53 6e-06
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 53 6e-06
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 53 8e-06
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 53 8e-06
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 52 1e-05
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 52 1e-05
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 50 4e-05
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 50 6e-05
UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1; Bu... 50 6e-05
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 50 8e-05
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 49 1e-04
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 49 1e-04
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 48 2e-04
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 48 2e-04
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 48 2e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 2e-04
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 48 3e-04
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 47 4e-04
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 46 7e-04
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 46 0.001
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 46 0.001
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 46 0.001
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 45 0.002
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 44 0.003
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 44 0.005
UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1; Clon... 39 0.11
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 39 0.11
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 35 1.8
UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra ... 33 5.5
UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3; ... 33 9.6
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 126 bits (304), Expect = 6e-28
Identities = 68/112 (60%), Positives = 73/112 (65%)
Frame = +3
Query: 294 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 473
SFDQ+PLFV AVGITAF AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF
Sbjct: 174 SFDQMPLFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFW 233
Query: 474 FFGHPEVYILIFQDLV*FLILFHXXXXXXXXXXXXXXFMLY*QLGY*DLLFE 629
FFGHP++ QDLV F +LF FM L Y DLLFE
Sbjct: 234 FFGHPKLMFSFSQDLVSFHMLFPKKVEKSKLLVVSVSFMQSWLLVYSDLLFE 285
Score = 117 bits (282), Expect = 3e-25
Identities = 59/83 (71%), Positives = 64/83 (77%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 180
GN LVPL+LGAPD+AFPR+NN+ F IVENGAGTG TVYPPLSSNIAH
Sbjct: 76 GNWLVPLMLGAPDMAFPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAH 135
Query: 181 RGRSVDLAIFSLHLAGISSIIGA 249
G SVDLAIFSLHLAGISSI+GA
Sbjct: 136 GGSSVDLAIFSLHLAGISSILGA 158
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 118 bits (285), Expect = 1e-25
Identities = 56/71 (78%), Positives = 59/71 (83%)
Frame = +3
Query: 294 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 473
SFDQ+PLF+ AVGITA AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF
Sbjct: 150 SFDQMPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFW 209
Query: 474 FFGHPEVYILI 506
FFGHPEVYILI
Sbjct: 210 FFGHPEVYILI 220
Score = 117 bits (281), Expect = 3e-25
Identities = 58/83 (69%), Positives = 64/83 (77%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 180
GN L+PL+LGAPD+AFPR+NN+ F IVENGAGTG TVYPPLSSNIAH
Sbjct: 52 GNWLIPLMLGAPDMAFPRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAH 111
Query: 181 RGRSVDLAIFSLHLAGISSIIGA 249
G SVDLAIFSLHLAGISSI+GA
Sbjct: 112 GGSSVDLAIFSLHLAGISSILGA 134
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 114 bits (275), Expect = 2e-24
Identities = 54/82 (65%), Positives = 64/82 (78%)
Frame = -1
Query: 248 APIIDEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQN 69
AP I+E PAKC+EKI STD P CAI SGG TVHPVP P STI L + ++EGG +QN
Sbjct: 74 APKIEETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQN 133
Query: 68 LILFIRGNAISGAPSIRGTNQF 3
L+LFIRGNA+SGAP++ GTNQF
Sbjct: 134 LMLFIRGNAMSGAPNMSGTNQF 155
Score = 77.0 bits (181), Expect = 5e-13
Identities = 37/54 (68%), Positives = 43/54 (79%)
Frame = -2
Query: 469 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKG 308
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN G
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSG 53
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 109 bits (263), Expect = 5e-23
Identities = 54/83 (65%), Positives = 61/83 (73%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 180
GN LVPL+LGAPD+AFPR+NN+ F VE+GAGTG TVYPPLS N AH
Sbjct: 62 GNWLVPLMLGAPDMAFPRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAH 121
Query: 181 RGRSVDLAIFSLHLAGISSIIGA 249
G SVDLAIFSLHLAG+SSI+GA
Sbjct: 122 AGPSVDLAIFSLHLAGVSSILGA 144
Score = 78.2 bits (184), Expect = 2e-13
Identities = 38/53 (71%), Positives = 40/53 (75%)
Frame = +3
Query: 312 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 470
LFV +V ITA AGAIT+LLTDRN NTSFFDPAGGGDPILYQHLF
Sbjct: 166 LFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 108 bits (259), Expect = 2e-22
Identities = 54/83 (65%), Positives = 62/83 (74%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 180
GN LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH
Sbjct: 80 GNWLVPLMIGAPDMAFPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAH 139
Query: 181 RGRSVDLAIFSLHLAGISSIIGA 249
G SVDLAIFSLHLAGISSI+GA
Sbjct: 140 AGASVDLAIFSLHLAGISSILGA 162
Score = 100 bits (240), Expect = 3e-20
Identities = 49/68 (72%), Positives = 52/68 (76%)
Frame = +3
Query: 303 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 482
Q PLFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFG
Sbjct: 181 QTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFG 240
Query: 483 HPEVYILI 506
HPEVYILI
Sbjct: 241 HPEVYILI 248
Score = 32.7 bits (71), Expect = 9.6
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETF 568
PGFG+ISH+++ GKKE F
Sbjct: 250 PGFGMISHVVTYYAGKKEPF 269
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 105 bits (253), Expect = 9e-22
Identities = 50/68 (73%), Positives = 55/68 (80%)
Frame = +3
Query: 303 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 482
+LPLFV +V +TAF AGAIT+LLTDRN NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 183 RLPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFG 242
Query: 483 HPEVYILI 506
HPEVYILI
Sbjct: 243 HPEVYILI 250
Score = 98.3 bits (234), Expect = 2e-19
Identities = 46/83 (55%), Positives = 59/83 (71%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 180
GN VP+++GAPD+AFPR+NNI F +VE G+GTG TVYPPLS +H
Sbjct: 82 GNWFVPILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSH 141
Query: 181 RGRSVDLAIFSLHLAGISSIIGA 249
G +VDLAIFSLHL+G+SSI+G+
Sbjct: 142 SGGAVDLAIFSLHLSGVSSILGS 164
Score = 85.8 bits (203), Expect = 1e-15
Identities = 43/73 (58%), Positives = 50/73 (68%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
PGFGIISHI+S GK F F+V AHH+FTVG+D+DTRAYFT+A
Sbjct: 252 PGFGIISHIVSTFSGKP-VFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAA 310
Query: 689 TIIIAVPTGIKIF 727
T+IIAVPTGIKIF
Sbjct: 311 TMIIAVPTGIKIF 323
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 105 bits (251), Expect = 1e-21
Identities = 51/83 (61%), Positives = 60/83 (72%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 180
GN LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH
Sbjct: 79 GNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAH 138
Query: 181 RGRSVDLAIFSLHLAGISSIIGA 249
G SVDL IFSLHLAG+SSI+GA
Sbjct: 139 AGASVDLTIFSLHLAGVSSILGA 161
Score = 100 bits (239), Expect = 4e-20
Identities = 48/68 (70%), Positives = 52/68 (76%)
Frame = +3
Query: 303 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 482
Q PLFV +V +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFG
Sbjct: 180 QTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFG 239
Query: 483 HPEVYILI 506
HPEVYILI
Sbjct: 240 HPEVYILI 247
Score = 92.3 bits (219), Expect = 1e-17
Identities = 41/73 (56%), Positives = 52/73 (71%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
PGFG+ISH+++ GKKE F FIV AHH+FTVG+D+DTRAYFTSA
Sbjct: 249 PGFGMISHVVTYYAGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSA 308
Query: 689 TIIIAVPTGIKIF 727
T+IIA+PTG+K+F
Sbjct: 309 TMIIAIPTGVKVF 321
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 105 bits (251), Expect = 1e-21
Identities = 51/83 (61%), Positives = 60/83 (72%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 180
GN LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH
Sbjct: 79 GNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAH 138
Query: 181 RGRSVDLAIFSLHLAGISSIIGA 249
G SVDL IFSLHLAG+SSI+GA
Sbjct: 139 AGASVDLTIFSLHLAGVSSILGA 161
Score = 101 bits (242), Expect = 2e-20
Identities = 49/68 (72%), Positives = 52/68 (76%)
Frame = +3
Query: 303 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 482
Q PLFV AV +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFG
Sbjct: 180 QTPLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFG 239
Query: 483 HPEVYILI 506
HPEVYILI
Sbjct: 240 HPEVYILI 247
Score = 93.5 bits (222), Expect = 5e-18
Identities = 42/73 (57%), Positives = 52/73 (71%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
PGFGIISH+++ GKKE F FIV AHH+FTVG+D+DTRAYFTSA
Sbjct: 249 PGFGIISHVVAYYAGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSA 308
Query: 689 TIIIAVPTGIKIF 727
T+IIA+PTG+K+F
Sbjct: 309 TMIIAIPTGVKVF 321
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 104 bits (250), Expect = 2e-21
Identities = 50/83 (60%), Positives = 60/83 (72%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 180
GN L+PL++GAPD+AFPR+NN+ F +E GAGTG TVYPPL+ N+AH
Sbjct: 68 GNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAH 127
Query: 181 RGRSVDLAIFSLHLAGISSIIGA 249
G SVDL IFSLHLAGISSI+GA
Sbjct: 128 AGASVDLTIFSLHLAGISSILGA 150
Score = 49.6 bits (113), Expect = 8e-05
Identities = 26/43 (60%), Positives = 28/43 (65%)
Frame = +3
Query: 303 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 431
Q PLFV AV ITA A IT+LLTDRNLNT+FFDP
Sbjct: 169 QTPLFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 104 bits (250), Expect = 2e-21
Identities = 49/68 (72%), Positives = 54/68 (79%)
Frame = +3
Query: 303 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 482
+LPLFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF FFG
Sbjct: 180 KLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFG 239
Query: 483 HPEVYILI 506
HPEVYILI
Sbjct: 240 HPEVYILI 247
Score = 101 bits (242), Expect = 2e-20
Identities = 50/83 (60%), Positives = 59/83 (71%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 180
GN LVP+++GAPD+AFPR+NNI F VE GAGTG TVYPPLS +H
Sbjct: 79 GNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSH 138
Query: 181 RGRSVDLAIFSLHLAGISSIIGA 249
G SVDLAIFSLHL+GISS++GA
Sbjct: 139 SGGSVDLAIFSLHLSGISSMLGA 161
Score = 79.8 bits (188), Expect = 6e-14
Identities = 38/73 (52%), Positives = 49/73 (67%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
PGFG++SHI+S GK F F+V +HH++ VG+D+DTRAYFT+A
Sbjct: 249 PGFGMVSHIVSAFSGKP-VFGYLGMVYAMFSIGILGFLVWSHHMYAVGLDVDTRAYFTAA 307
Query: 689 TIIIAVPTGIKIF 727
T+IIAVPTGIKIF
Sbjct: 308 TMIIAVPTGIKIF 320
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 104 bits (249), Expect = 3e-21
Identities = 51/83 (61%), Positives = 60/83 (72%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 180
GN VPL++GAPD+AFPR+NNI F +VE GAGTG TVYPPL+S AH
Sbjct: 80 GNWFVPLMIGAPDMAFPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAH 139
Query: 181 RGRSVDLAIFSLHLAGISSIIGA 249
G SVD+AIFSLHLAG+SSI+GA
Sbjct: 140 SGGSVDMAIFSLHLAGLSSILGA 162
Score = 83.0 bits (196), Expect = 7e-15
Identities = 40/63 (63%), Positives = 46/63 (73%)
Frame = +3
Query: 294 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 473
+ ++PLFV +V ITA AGAIT+LLTDR NT+FFDPAGGGDPILYQHLF
Sbjct: 178 TMSRIPLFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFW 237
Query: 474 FFG 482
FFG
Sbjct: 238 FFG 240
Score = 63.3 bits (147), Expect = 6e-09
Identities = 28/37 (75%), Positives = 34/37 (91%)
Frame = +2
Query: 617 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 727
FIV A H++ VG+D+DTRAYFT+AT+IIAVPTGIKIF
Sbjct: 250 FIVWADHMYVVGMDVDTRAYFTAATMIIAVPTGIKIF 286
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 104 bits (249), Expect = 3e-21
Identities = 50/83 (60%), Positives = 60/83 (72%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 180
GN LVPL++GAPD+AFPR+NN+ F +VE GAGTG TVYPPL+ N +H
Sbjct: 79 GNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSH 138
Query: 181 RGRSVDLAIFSLHLAGISSIIGA 249
G SVDL IFSLHLAG+SSI+GA
Sbjct: 139 PGASVDLTIFSLHLAGVSSILGA 161
Score = 100 bits (240), Expect = 3e-20
Identities = 49/68 (72%), Positives = 52/68 (76%)
Frame = +3
Query: 303 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 482
Q PLFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFG
Sbjct: 180 QTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFG 239
Query: 483 HPEVYILI 506
HPEVYILI
Sbjct: 240 HPEVYILI 247
Score = 92.7 bits (220), Expect = 8e-18
Identities = 42/73 (57%), Positives = 52/73 (71%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
PGFG+ISHI++ GKKE F FIV AHH+FTVG+D+DTRAYFTSA
Sbjct: 249 PGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSA 308
Query: 689 TIIIAVPTGIKIF 727
T+IIA+PTG+K+F
Sbjct: 309 TMIIAIPTGVKVF 321
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 101 bits (243), Expect = 1e-20
Identities = 48/71 (67%), Positives = 55/71 (77%)
Frame = +3
Query: 294 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 473
S ++PLFV ++ +TAF AGAIT+LLTDRN NTSFFD +GGGDPILYQHLF
Sbjct: 185 SMYRIPLFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFW 244
Query: 474 FFGHPEVYILI 506
FFGHPEVYILI
Sbjct: 245 FFGHPEVYILI 255
Score = 97.5 bits (232), Expect = 3e-19
Identities = 47/83 (56%), Positives = 59/83 (71%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 180
GN LVP+++G+PD+AFPR+NNI F +VE G GTG TVYPPLSS +H
Sbjct: 87 GNWLVPIMIGSPDMAFPRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSH 146
Query: 181 RGRSVDLAIFSLHLAGISSIIGA 249
G +VDLAIFSLH++G SSI+GA
Sbjct: 147 SGGAVDLAIFSLHISGASSILGA 169
Score = 83.0 bits (196), Expect = 7e-15
Identities = 41/73 (56%), Positives = 50/73 (68%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
PGFG+ISHI+S +K F FIV AHH++TVG+D+DTRAYFT+A
Sbjct: 257 PGFGMISHIVSTF-SRKPVFGYIGMVYAMVSIGVLGFIVWAHHMYTVGLDVDTRAYFTAA 315
Query: 689 TIIIAVPTGIKIF 727
T+IIAVPTGIKIF
Sbjct: 316 TMIIAVPTGIKIF 328
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 101 bits (242), Expect = 2e-20
Identities = 48/71 (67%), Positives = 55/71 (77%)
Frame = +3
Query: 294 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 473
+ D++ LF +V ITA AGAIT+LLTDRN+NTSFFDP+GGGDPILYQHLF
Sbjct: 161 NMDKMSLFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFW 220
Query: 474 FFGHPEVYILI 506
FFGHPEVYILI
Sbjct: 221 FFGHPEVYILI 231
Score = 97.9 bits (233), Expect = 2e-19
Identities = 46/73 (63%), Positives = 53/73 (72%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
PGFGIISH+I E GKKETF FIV AHH+FT+G+D+DTRAYFTSA
Sbjct: 233 PGFGIISHMIFNESGKKETFGMLGMIYAMLTIGFLGFIVWAHHMFTIGMDVDTRAYFTSA 292
Query: 689 TIIIAVPTGIKIF 727
T+IIA+PTGIKIF
Sbjct: 293 TMIIAIPTGIKIF 305
Score = 93.1 bits (221), Expect = 6e-18
Identities = 45/83 (54%), Positives = 55/83 (66%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 180
GN L+PL+LG+PD++FPR+NN+ F + G GTG TVYPPLS + H
Sbjct: 63 GNWLIPLMLGSPDMSFPRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGH 122
Query: 181 RGRSVDLAIFSLHLAGISSIIGA 249
G SVDL IFSLHLAG SSI+GA
Sbjct: 123 GGMSVDLGIFSLHLAGASSIMGA 145
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 101 bits (242), Expect = 2e-20
Identities = 50/83 (60%), Positives = 59/83 (71%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 180
GN LVP+++GAPD+AFPR+NNI F VE GAGTG TVYPPLS +H
Sbjct: 79 GNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSH 138
Query: 181 RGRSVDLAIFSLHLAGISSIIGA 249
G SVDLAIFSLHL+GISS++GA
Sbjct: 139 SGGSVDLAIFSLHLSGISSMLGA 161
Score = 82.2 bits (194), Expect = 1e-14
Identities = 43/78 (55%), Positives = 51/78 (65%)
Frame = +3
Query: 303 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 482
+LPLFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHL F
Sbjct: 180 KLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHL---FS 236
Query: 483 HPEVYILIFQDLV*FLIL 536
+YI F + F +L
Sbjct: 237 KTTLYISFFYLIYKFTLL 254
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 101 bits (242), Expect = 2e-20
Identities = 50/83 (60%), Positives = 59/83 (71%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 180
GN LVP+++GAPD+AFPR+NNI F VE GAGTG TVYPPLS +H
Sbjct: 79 GNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSH 138
Query: 181 RGRSVDLAIFSLHLAGISSIIGA 249
G SVDLAIFSLHL+GISS++GA
Sbjct: 139 SGGSVDLAIFSLHLSGISSMLGA 161
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 100 bits (239), Expect = 4e-20
Identities = 47/73 (64%), Positives = 54/73 (73%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
PGFG+ISHIISQE GKKE F F+V AHH+FTVG+D+DTRAYFTSA
Sbjct: 162 PGFGMISHIISQESGKKEAFGTLGMIYAMMAIGLLGFVVWAHHMFTVGMDVDTRAYFTSA 221
Query: 689 TIIIAVPTGIKIF 727
T+IIAVPTGIK+F
Sbjct: 222 TMIIAVPTGIKVF 234
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 98.7 bits (235), Expect = 1e-19
Identities = 50/83 (60%), Positives = 58/83 (69%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 180
GN L+PL++GA D AFPRINNI F +VE+GAGTG TVYPPLSS AH
Sbjct: 80 GNYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAH 139
Query: 181 RGRSVDLAIFSLHLAGISSIIGA 249
G SVDLAIF+LHL ISS++GA
Sbjct: 140 SGPSVDLAIFALHLTSISSLLGA 162
Score = 92.3 bits (219), Expect = 1e-17
Identities = 43/68 (63%), Positives = 51/68 (75%)
Frame = +3
Query: 303 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 482
+LPLFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFG
Sbjct: 181 KLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFG 240
Query: 483 HPEVYILI 506
HPEVYILI
Sbjct: 241 HPEVYILI 248
Score = 80.2 bits (189), Expect = 5e-14
Identities = 39/73 (53%), Positives = 48/73 (65%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
PGFGIISH++S KK F F+V +HH++ VG+D DTRAYFTSA
Sbjct: 250 PGFGIISHVVSTY-SKKPVFGEISMVYAMASIGLLGFLVWSHHMYIVGLDADTRAYFTSA 308
Query: 689 TIIIAVPTGIKIF 727
T+IIA+PTGIKIF
Sbjct: 309 TMIIAIPTGIKIF 321
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 98.7 bits (235), Expect = 1e-19
Identities = 50/83 (60%), Positives = 58/83 (69%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 180
GN L+PL++GA D AFPRINNI F +VE+GAGTG TVYPPLSS AH
Sbjct: 80 GNYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAH 139
Query: 181 RGRSVDLAIFSLHLAGISSIIGA 249
G SVDLAIF+LHL ISS++GA
Sbjct: 140 SGPSVDLAIFALHLTSISSLLGA 162
Score = 75.8 bits (178), Expect = 1e-12
Identities = 36/68 (52%), Positives = 46/68 (67%)
Frame = +3
Query: 303 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 482
+LPLFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFG
Sbjct: 181 KLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFG 240
Query: 483 HPEVYILI 506
I++
Sbjct: 241 QTVATIIM 248
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 96.3 bits (229), Expect = 7e-19
Identities = 48/83 (57%), Positives = 59/83 (71%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 180
GN ++PL++GA D++FPRIN+I F +VE+GAGTG TVYPPLSS AH
Sbjct: 80 GNYMLPLMIGATDMSFPRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAH 139
Query: 181 RGRSVDLAIFSLHLAGISSIIGA 249
G SVDLAIFSLHL ISS++GA
Sbjct: 140 SGPSVDLAIFSLHLTSISSLLGA 162
Score = 92.7 bits (220), Expect = 8e-18
Identities = 44/71 (61%), Positives = 50/71 (70%)
Frame = +3
Query: 294 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 473
S ++PLFV A+ ITAF + IT+LL DRN NTSFF+ AGGGDPI YQH F
Sbjct: 178 SMHKMPLFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFW 237
Query: 474 FFGHPEVYILI 506
FFGHPEVYILI
Sbjct: 238 FFGHPEVYILI 248
Score = 80.2 bits (189), Expect = 5e-14
Identities = 39/73 (53%), Positives = 48/73 (65%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
PGFGI+SHI+S KK F F+V +HH++ VG+D DTRAYFTSA
Sbjct: 250 PGFGIVSHIVSTY-SKKPVFGEISMVYAMASIGLLGFLVWSHHMYIVGLDADTRAYFTSA 308
Query: 689 TIIIAVPTGIKIF 727
T+IIA+PTGIKIF
Sbjct: 309 TMIIAIPTGIKIF 321
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 95.5 bits (227), Expect = 1e-18
Identities = 43/68 (63%), Positives = 53/68 (77%)
Frame = +3
Query: 303 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 482
++PLF +V +TA+ AGAIT+LLTDRN T+FFDPAGGGDPIL+QH+F FFG
Sbjct: 286 KVPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHIFWFFG 345
Query: 483 HPEVYILI 506
HPEVYI+I
Sbjct: 346 HPEVYIVI 353
Score = 81.0 bits (191), Expect = 3e-14
Identities = 35/83 (42%), Positives = 54/83 (65%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 180
GN +PL++GAPD+AFPR+NN+ + +++ GAG G T YPP+S+
Sbjct: 185 GNYFMPLMIGAPDMAFPRLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVE 244
Query: 181 RGRSVDLAIFSLHLAGISSIIGA 249
R+VD AIF++H++G SSI+G+
Sbjct: 245 TSRAVDFAIFAVHVSGASSILGS 267
Score = 66.1 bits (154), Expect = 8e-10
Identities = 33/73 (45%), Positives = 44/73 (60%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
P FG+ISHI++ KK F F+V AHH++TVG+ + +AYF A
Sbjct: 355 PAFGVISHIVATF-SKKPIFGYLPMVYALVAIGGLGFVVWAHHMYTVGMTLTQQAYFMVA 413
Query: 689 TIIIAVPTGIKIF 727
T++IAVPTGIKIF
Sbjct: 414 TMVIAVPTGIKIF 426
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 95.5 bits (227), Expect = 1e-18
Identities = 44/67 (65%), Positives = 50/67 (74%)
Frame = +3
Query: 306 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 485
LPLFV +V +T+F A AIT+LL DRN NTSF+DP GGGD +LYQHLF FFGH
Sbjct: 185 LPLFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGH 244
Query: 486 PEVYILI 506
PEVYILI
Sbjct: 245 PEVYILI 251
Score = 88.6 bits (210), Expect = 1e-16
Identities = 43/83 (51%), Positives = 51/83 (61%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 180
GN VP+++GAPD++FPR+NN F E G GTG TVYPPLSS +H
Sbjct: 83 GNYFVPILIGAPDMSFPRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSH 142
Query: 181 RGRSVDLAIFSLHLAGISSIIGA 249
G SVDL IFS HL GI SI+ A
Sbjct: 143 SGASVDLMIFSFHLVGIGSIVAA 165
Score = 75.8 bits (178), Expect = 1e-12
Identities = 36/73 (49%), Positives = 47/73 (64%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
PGFG++SHII+ KK F FIV AHH++T GID T+AYFT+A
Sbjct: 253 PGFGLVSHIIATF-SKKRVFGHVPMIAAMLMIGLIGFIVWAHHMYTSGIDTSTKAYFTAA 311
Query: 689 TIIIAVPTGIKIF 727
T++IA+PTGIK+F
Sbjct: 312 TMVIAIPTGIKVF 324
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 95.5 bits (227), Expect = 1e-18
Identities = 47/83 (56%), Positives = 58/83 (69%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 180
GN ++PL++GA D AFPRINNI F +VE+GAGTG TVYPPL+S AH
Sbjct: 80 GNYMLPLMIGATDTAFPRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAH 139
Query: 181 RGRSVDLAIFSLHLAGISSIIGA 249
G SVDLAIF+LH+ ISS++GA
Sbjct: 140 SGPSVDLAIFALHMTSISSLLGA 162
Score = 73.7 bits (173), Expect = 4e-12
Identities = 35/60 (58%), Positives = 42/60 (70%)
Frame = +3
Query: 303 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 482
+LPLFV A+ ITA + +T+LL DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 181 KLPLFVWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 92.7 bits (220), Expect = 8e-18
Identities = 46/68 (67%), Positives = 50/68 (73%)
Frame = +3
Query: 303 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 482
+L LF AV ITA AG IT++LTDRN NTSFF+ AGGGDPILYQHLF FFG
Sbjct: 181 KLILFAWAVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFFG 240
Query: 483 HPEVYILI 506
HPEVYILI
Sbjct: 241 HPEVYILI 248
Score = 92.3 bits (219), Expect = 1e-17
Identities = 45/83 (54%), Positives = 55/83 (66%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 180
GN L+PL LG PD+ FPR+NNI + +ENG GTG T+YPPLS +H
Sbjct: 80 GNFLLPLGLGGPDMGFPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSH 139
Query: 181 RGRSVDLAIFSLHLAGISSIIGA 249
G SVDLAIF LHL+GISS++GA
Sbjct: 140 SGPSVDLAIFGLHLSGISSLLGA 162
Score = 78.2 bits (184), Expect = 2e-13
Identities = 39/73 (53%), Positives = 47/73 (64%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
PGFGIIS IS K F F+V +HH++TVG+D+DTRAYFT+A
Sbjct: 250 PGFGIISTTISAN-SNKSVFGYLGMVYAMCSIGILGFVVWSHHMYTVGLDVDTRAYFTAA 308
Query: 689 TIIIAVPTGIKIF 727
T+IIAVPTGIKIF
Sbjct: 309 TLIIAVPTGIKIF 321
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 92.7 bits (220), Expect = 8e-18
Identities = 42/73 (57%), Positives = 52/73 (71%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
PGFG+ISHI++ GKKE F FIV AHH+FTVG+D+DTRAYFTSA
Sbjct: 14 PGFGMISHIVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSA 73
Query: 689 TIIIAVPTGIKIF 727
T+IIA+PTG+K+F
Sbjct: 74 TMIIAIPTGVKVF 86
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 92.3 bits (219), Expect = 1e-17
Identities = 43/68 (63%), Positives = 51/68 (75%)
Frame = +3
Query: 303 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 482
++PLFV +V +TAF A AIT+LLTDRN T+F+D AGGGDP LYQHLF FFG
Sbjct: 223 KMPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFG 282
Query: 483 HPEVYILI 506
HPEVYI+I
Sbjct: 283 HPEVYIMI 290
Score = 79.8 bits (188), Expect = 6e-14
Identities = 44/87 (50%), Positives = 55/87 (63%), Gaps = 4/87 (4%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVE----NGAGTG*TVYPPLSS 168
GN VP+++GAPD+AFPR+NNI F V NGAGTG TVY PLS+
Sbjct: 119 GNWFVPIMIGAPDMAFPRMNNISFWLLIPAFALLLGSTFVPGGTGNGAGTGWTVYAPLST 178
Query: 169 NIAHRGRSVDLAIFSLHLAGISSIIGA 249
+ G +VD+AI SLH+AG SSI+GA
Sbjct: 179 S-GSAGPAVDMAILSLHIAGASSILGA 204
Score = 69.7 bits (163), Expect = 7e-11
Identities = 34/73 (46%), Positives = 45/73 (61%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
PGFGIIS I+S +K F F+V AHH+FT G+ ++ + YFT+A
Sbjct: 292 PGFGIISQIVSTF-SRKPVFGYLGMAYAMVAIGVVGFVVWAHHMFTTGMSVNVKMYFTAA 350
Query: 689 TIIIAVPTGIKIF 727
T++IAVPTGIKIF
Sbjct: 351 TMVIAVPTGIKIF 363
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 92.3 bits (219), Expect = 1e-17
Identities = 41/83 (49%), Positives = 55/83 (66%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 180
GN L+P+++G PD+AFPR+NN+ + I+ENG GTG T+YPPLS +H
Sbjct: 106 GNFLLPILIGGPDMAFPRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSH 165
Query: 181 RGRSVDLAIFSLHLAGISSIIGA 249
VDL IF LHL+GISS++GA
Sbjct: 166 SSMGVDLGIFGLHLSGISSLLGA 188
Score = 89.4 bits (212), Expect = 8e-17
Identities = 46/68 (67%), Positives = 50/68 (73%)
Frame = +3
Query: 303 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 482
+L LF AV ITA A AIT+LLTDRNLNTSF++ AGGGD ILYQHLF FFG
Sbjct: 207 KLALFGWAVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWFFG 266
Query: 483 HPEVYILI 506
HPEVYILI
Sbjct: 267 HPEVYILI 274
Score = 79.4 bits (187), Expect = 8e-14
Identities = 38/73 (52%), Positives = 48/73 (65%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
PGFGIIS +IS K F FIV +HH++TVG+D+DTRAYFT+A
Sbjct: 276 PGFGIISTVISAN-SNKNVFGYLGMVYAMMSIGLLGFIVWSHHMYTVGLDVDTRAYFTAA 334
Query: 689 TIIIAVPTGIKIF 727
T+IIA+PTG+KIF
Sbjct: 335 TLIIAIPTGVKIF 347
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 90.6 bits (215), Expect = 3e-17
Identities = 41/73 (56%), Positives = 52/73 (71%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
PGFG+ISH+I+ GK+E F F+V AHH+FTVG+D+DTRAYFT+A
Sbjct: 226 PGFGMISHVIAHYSGKREPFGYLGMVYAMIAIGVLGFLVWAHHMFTVGMDVDTRAYFTAA 285
Query: 689 TIIIAVPTGIKIF 727
T+IIAVPTGIK+F
Sbjct: 286 TMIIAVPTGIKVF 298
Score = 65.3 bits (152), Expect = 1e-09
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +3
Query: 405 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 506
N T+FFDPAGGGD IL+QHLF FFGHPEVYILI
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILI 224
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 90.2 bits (214), Expect = 5e-17
Identities = 43/61 (70%), Positives = 47/61 (77%)
Frame = +3
Query: 303 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 482
++PLFV AV ITA AGAIT+LLTDRN+NTSFFDPAGGGDPILYQHLF F G
Sbjct: 99 RMPLFVWAVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXG 158
Query: 483 H 485
H
Sbjct: 159 H 159
Score = 88.6 bits (210), Expect = 1e-16
Identities = 47/77 (61%), Positives = 52/77 (67%)
Frame = +1
Query: 19 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 198
L LGAPD FPR N+ F VE GAGTG TV PPLS+NIAH G SVD
Sbjct: 4 LXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVD 63
Query: 199 LAIFSLHLAGISSIIGA 249
LAIFSLH+AG+ SI+GA
Sbjct: 64 LAIFSLHMAGVXSILGA 80
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 89.0 bits (211), Expect = 1e-16
Identities = 44/87 (50%), Positives = 58/87 (66%), Gaps = 4/87 (4%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSS 168
GN L+PL++G PD+AFPR+NNI F I+E G GTG T+ YPPLS
Sbjct: 108 GNFLMPLMIGGPDMAFPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSG 167
Query: 169 NIAHRGRSVDLAIFSLHLAGISSIIGA 249
+H G SVDLAIF+LHL+G+SS++G+
Sbjct: 168 LQSHSGPSVDLAIFALHLSGVSSLLGS 194
Score = 80.6 bits (190), Expect = 4e-14
Identities = 35/42 (83%), Positives = 39/42 (92%)
Frame = +3
Query: 381 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 506
IT++LTDRN NTSFF+ AGGGDPIL+QHLF FFGHPEVYILI
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILI 273
Score = 64.1 bits (149), Expect = 3e-09
Identities = 26/32 (81%), Positives = 32/32 (100%)
Frame = +2
Query: 632 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 727
HH++TVG+D+DTRAYFT+AT+IIAVPTGIKIF
Sbjct: 349 HHMYTVGLDVDTRAYFTAATLIIAVPTGIKIF 380
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 87.8 bits (208), Expect = 2e-16
Identities = 45/83 (54%), Positives = 56/83 (67%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 180
GN L+PL+LGA D+AF R+NNI F +VE GAGTG TVY PL+ +H
Sbjct: 85 GNYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSH 144
Query: 181 RGRSVDLAIFSLHLAGISSIIGA 249
G +VDLAIFSLHL+G SS++GA
Sbjct: 145 SGPAVDLAIFSLHLSGFSSLLGA 167
Score = 70.1 bits (164), Expect = 5e-11
Identities = 33/69 (47%), Positives = 44/69 (63%)
Frame = +3
Query: 297 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 476
++ +PLF AV TA A +T+ + DRN NTSFF+ AGGGD +LYQHLF +
Sbjct: 184 YENVPLFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYW 243
Query: 477 FGHPEVYIL 503
+ HPEV I+
Sbjct: 244 WNHPEVKII 252
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 87.4 bits (207), Expect = 3e-16
Identities = 41/70 (58%), Positives = 50/70 (71%)
Frame = +3
Query: 297 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 476
+ +LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F F
Sbjct: 196 YSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWF 255
Query: 477 FGHPEVYILI 506
FGHPEVYILI
Sbjct: 256 FGHPEVYILI 265
Score = 85.4 bits (202), Expect = 1e-15
Identities = 40/82 (48%), Positives = 55/82 (67%)
Frame = +1
Query: 4 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 183
N LVPL +G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H
Sbjct: 98 NYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHS 157
Query: 184 GRSVDLAIFSLHLAGISSIIGA 249
G S+D+AIF+LHL+G+SSI GA
Sbjct: 158 GSSIDMAIFALHLSGLSSIFGA 179
Score = 66.5 bits (155), Expect = 6e-10
Identities = 33/73 (45%), Positives = 44/73 (60%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
P FG++S I+ Q KK F F V +HH+FTVG+D D+RAYF+ A
Sbjct: 267 PVFGVVSQIV-QVYAKKPIFGKIGMIYAMASIGFLGFCVWSHHMFTVGLDADSRAYFSGA 325
Query: 689 TIIIAVPTGIKIF 727
++IIA+PTG KIF
Sbjct: 326 SLIIAIPTGSKIF 338
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 87.4 bits (207), Expect = 3e-16
Identities = 41/70 (58%), Positives = 50/70 (71%)
Frame = +3
Query: 297 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 476
+ +LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F F
Sbjct: 196 YSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWF 255
Query: 477 FGHPEVYILI 506
FGHPEVYILI
Sbjct: 256 FGHPEVYILI 265
Score = 85.4 bits (202), Expect = 1e-15
Identities = 40/82 (48%), Positives = 55/82 (67%)
Frame = +1
Query: 4 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 183
N LVPL +G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H
Sbjct: 98 NYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHS 157
Query: 184 GRSVDLAIFSLHLAGISSIIGA 249
G S+D+AIF+LHL+G+SSI GA
Sbjct: 158 GSSIDMAIFALHLSGLSSIFGA 179
Score = 37.1 bits (82), Expect = 0.45
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTR 670
P FG++S I+ Q KK F F V +HH+FTVG+D D R
Sbjct: 267 PVFGVVSQIV-QVYAKKPIFGKIGMIYAMASIGFLGFCVWSHHMFTVGLDADKR 319
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 85.4 bits (202), Expect = 1e-15
Identities = 40/82 (48%), Positives = 55/82 (67%)
Frame = +1
Query: 4 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 183
N LVPL +G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H
Sbjct: 98 NYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHS 157
Query: 184 GRSVDLAIFSLHLAGISSIIGA 249
G S+D+AIF+LHL+G+SSI GA
Sbjct: 158 GSSIDMAIFALHLSGLSSIFGA 179
Score = 71.3 bits (167), Expect = 2e-11
Identities = 36/72 (50%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Frame = +3
Query: 297 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 476
+ +LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F F
Sbjct: 196 YSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWF 255
Query: 477 FGH--PEVYILI 506
FG P + I+I
Sbjct: 256 FGQIWPIIIIII 267
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 85.4 bits (202), Expect = 1e-15
Identities = 40/82 (48%), Positives = 55/82 (67%)
Frame = +1
Query: 4 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 183
N LVPL +G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H
Sbjct: 98 NYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHS 157
Query: 184 GRSVDLAIFSLHLAGISSIIGA 249
G S+D+AIF+LHL+G+SSI GA
Sbjct: 158 GSSIDMAIFALHLSGLSSIFGA 179
Score = 66.1 bits (154), Expect = 8e-10
Identities = 38/80 (47%), Positives = 51/80 (63%)
Frame = +3
Query: 297 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 476
+ +LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+ F
Sbjct: 196 YSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHI--F 253
Query: 477 FGHPEVYILIFQDLV*FLIL 536
+ +P V ILI+ +LIL
Sbjct: 254 YKNP-VLILIWLTSGIYLIL 272
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 81.8 bits (193), Expect = 2e-14
Identities = 32/44 (72%), Positives = 36/44 (81%)
Frame = +1
Query: 514 IWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIYCLSSSYIH 645
IWYNFSYYF K KK N W+F +NLCY SNW+I IYCLSSSYI+
Sbjct: 44 IWYNFSYYFPSKSKKGNLWVFSDNLCYISNWIISIYCLSSSYIY 87
Score = 70.1 bits (164), Expect = 5e-11
Identities = 44/109 (40%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Frame = +2
Query: 404 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFPGFGI-ISHIISQERGKKETFXXXX 580
K KYIIF S W F+STFILIFWT SLYFNF S+ + K +
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLWVFSD 66
Query: 581 XXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 727
+ + + +I++ YFTSAT+IIAVPTGIKIF
Sbjct: 67 NLCYISNWIISIYCLSSSYIYSSN-SYWYSTYFTSATMIIAVPTGIKIF 114
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 81.8 bits (193), Expect = 2e-14
Identities = 36/71 (50%), Positives = 48/71 (67%)
Frame = +3
Query: 294 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 473
+ DQ+ +FV +T+F AG++ LL DRN NTSF+D GG+P+LYQHLF
Sbjct: 187 TLDQISMFVWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFW 246
Query: 474 FFGHPEVYILI 506
FFGHPEVY++I
Sbjct: 247 FFGHPEVYVII 257
Score = 62.1 bits (144), Expect = 1e-08
Identities = 32/83 (38%), Positives = 44/83 (53%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 180
GN ++PL+LGAP++AFPR+N + F + G G+ T YPPLS
Sbjct: 90 GNWMLPLMLGAPEMAFPRVNALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLSVE-GQ 148
Query: 181 RGRSVDLAIFSLHLAGISSIIGA 249
S+D I LH GI S++GA
Sbjct: 149 PELSLDTMILGLHTVGIGSLLGA 171
Score = 58.0 bits (134), Expect = 2e-07
Identities = 29/73 (39%), Positives = 39/73 (53%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
P FGIIS + K F V HH++T G+DIDTR YF++A
Sbjct: 259 PVFGIISEAVLFLTDKDRLFGQTSMTFASIWIAVLGTSVWGHHMYTAGLDIDTRTYFSAA 318
Query: 689 TIIIAVPTGIKIF 727
T+IIA+P+ +KIF
Sbjct: 319 TMIIAIPSAVKIF 331
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 81.4 bits (192), Expect = 2e-14
Identities = 38/71 (53%), Positives = 47/71 (66%)
Frame = +3
Query: 294 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 473
SF LF+ A ITA AG +T++L DRN NTSF+D GGGD IL+QH+F
Sbjct: 180 SFLSWSLFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFW 239
Query: 474 FFGHPEVYILI 506
FFGHPEVYI++
Sbjct: 240 FFGHPEVYIIL 250
Score = 61.7 bits (143), Expect = 2e-08
Identities = 29/82 (35%), Positives = 43/82 (52%)
Frame = +1
Query: 4 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 183
N +P++ G PD+ FPR+NN+ F + E G G G T+YP L H
Sbjct: 83 NYFIPVMAGFPDMVFPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHS 142
Query: 184 GRSVDLAIFSLHLAGISSIIGA 249
+ D +F++HL GISSI+ +
Sbjct: 143 SLACDFVMFAVHLLGISSILNS 164
Score = 52.0 bits (119), Expect = 1e-05
Identities = 27/73 (36%), Positives = 40/73 (54%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
P FG+IS I+ + G + F V AHH+F VG+D+D+RAYF
Sbjct: 252 PVFGLISTIV-EVIGFRCVFSTVAMIYSMILIAILGMFVWAHHMFVVGMDVDSRAYFGGV 310
Query: 689 TIIIAVPTGIKIF 727
+I+I +PT +K+F
Sbjct: 311 SILIGLPTCVKLF 323
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 80.2 bits (189), Expect = 5e-14
Identities = 39/65 (60%), Positives = 45/65 (69%)
Frame = +1
Query: 19 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 198
L+LGAPD+AFPR+NN+ F +VENGAGTG TVYPPLSS AH G SVD
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVD 60
Query: 199 LAIFS 213
LAI+S
Sbjct: 61 LAIYS 65
Score = 59.7 bits (138), Expect = 7e-08
Identities = 29/56 (51%), Positives = 32/56 (57%)
Frame = +2
Query: 317 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 484
CM C +Y TCFS S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 79.0 bits (186), Expect = 1e-13
Identities = 33/45 (73%), Positives = 39/45 (86%)
Frame = +3
Query: 372 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 506
A IT+LL DRN T+FF+P+GGGDPIL+QHLF FFGHPEVY+LI
Sbjct: 293 ASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLI 337
Score = 58.4 bits (135), Expect = 2e-07
Identities = 29/73 (39%), Positives = 37/73 (50%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
PGFGI+SHI +F +V HH+F VG D T +F+S
Sbjct: 339 PGFGIVSHICMSLSNNDSSFGYYGLICAMASIVCLGSVVWGHHMFMVGFDSLTGVFFSSI 398
Query: 689 TIIIAVPTGIKIF 727
T+II VPTGIK+F
Sbjct: 399 TMIIGVPTGIKVF 411
Score = 51.2 bits (117), Expect = 3e-05
Identities = 31/83 (37%), Positives = 42/83 (50%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 180
GN +P+ L D+ PR+N++ G G G T+YPPLS
Sbjct: 177 GNYFLPIFLCLDDLLLPRLNSLSLWLMVPSIFYMELSLYY--GCGIGWTLYPPLSI-WEG 233
Query: 181 RGRSVDLAIFSLHLAGISSIIGA 249
G VD +FSLHLAG+SS+IG+
Sbjct: 234 SGFGVDYLMFSLHLAGVSSLIGS 256
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 77.8 bits (183), Expect = 3e-13
Identities = 34/73 (46%), Positives = 45/73 (61%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
P FG+ISHI+ + K F F+V HH+F G+DIDTRAYFT+A
Sbjct: 252 PAFGVISHILCRSSAKLHVFGKIGMSWASMGIAWMGFLVWGHHMFVAGLDIDTRAYFTAA 311
Query: 689 TIIIAVPTGIKIF 727
T++IAVPTG+K+F
Sbjct: 312 TLMIAVPTGVKVF 324
Score = 74.5 bits (175), Expect = 2e-12
Identities = 32/45 (71%), Positives = 38/45 (84%)
Frame = +3
Query: 372 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 506
A +T+LL DR+ +TSF+ P GGGDPIL+QHLF FFGHPEVYILI
Sbjct: 206 AAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYILI 250
Score = 67.7 bits (158), Expect = 3e-10
Identities = 32/83 (38%), Positives = 48/83 (57%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 180
GN +PL++ D++ PR+NN+ + G G G T+YPPLS++
Sbjct: 81 GNWFIPLMIKIKDLSMPRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFM 140
Query: 181 RGRSVDLAIFSLHLAGISSIIGA 249
G +DLA+FSLH+AG+SSI G+
Sbjct: 141 DGLPIDLAVFSLHMAGMSSIAGS 163
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 73.3 bits (172), Expect = 6e-12
Identities = 35/70 (50%), Positives = 47/70 (67%)
Frame = +3
Query: 294 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 473
S D++PLFV ++ +T+F A T L+ DR + T FF+PA GGD +L+QHLF
Sbjct: 193 SLDRIPLFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFW 252
Query: 474 FFGHPEVYIL 503
FFGHPEVYI+
Sbjct: 253 FFGHPEVYII 262
Score = 35.9 bits (79), Expect = 1.0
Identities = 19/73 (26%), Positives = 36/73 (49%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
P G++S I++ ++ F F + HH+F G+ ++FT++
Sbjct: 265 PAVGMVSSIVATFT-QRPVFGYLAMVMALIATGVLAFGLWVHHMFVAGLPRLGESFFTAS 323
Query: 689 TIIIAVPTGIKIF 727
++ IAVP G++IF
Sbjct: 324 SMAIAVPAGLQIF 336
Score = 35.1 bits (77), Expect = 1.8
Identities = 20/64 (31%), Positives = 27/64 (42%)
Frame = +1
Query: 10 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 189
LVPL++G IAFPR+N + V+ G G Y PLS G+
Sbjct: 98 LVPLMVGTRHIAFPRLNAFSYWMYLAGGLLLWIAFAVDTGPDIGWFAYVPLSGPQYAAGK 157
Query: 190 SVDL 201
D+
Sbjct: 158 RADI 161
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 71.7 bits (168), Expect = 2e-11
Identities = 32/67 (47%), Positives = 44/67 (65%)
Frame = +3
Query: 306 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 485
L LF ++ + + A IT++LTD++L T F+D GGDP+LYQHLF FFGH
Sbjct: 165 LSLFCWSIVLVSLLLVLSLPVLAVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGH 224
Query: 486 PEVYILI 506
PEVY++I
Sbjct: 225 PEVYVVI 231
Score = 64.1 bits (149), Expect = 3e-09
Identities = 27/36 (75%), Positives = 34/36 (94%)
Frame = +2
Query: 620 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 727
+V AHH++T G+DIDTR+YFT+AT+IIAVPTGIKIF
Sbjct: 269 VVWAHHMYTAGLDIDTRSYFTAATMIIAVPTGIKIF 304
Score = 49.2 bits (112), Expect = 1e-04
Identities = 31/82 (37%), Positives = 44/82 (53%)
Frame = +1
Query: 4 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 183
N L+P PD+ FPR+N + F ++ + A G T YPPLSS
Sbjct: 75 NLLIPYHCNLPDLLFPRMNALSFWLMPFSLSL-----LLFSMASAGWTFYPPLSS----L 125
Query: 184 GRSVDLAIFSLHLAGISSIIGA 249
SV+ ++FSLHLAGI+S+I +
Sbjct: 126 SPSVEFSVFSLHLAGIASLISS 147
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 71.7 bits (168), Expect = 2e-11
Identities = 31/44 (70%), Positives = 35/44 (79%)
Frame = +3
Query: 375 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 506
G + +LL+D + NT FFDP GDPILYQHLF FFGHPEVYILI
Sbjct: 210 GGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILI 253
Score = 65.7 bits (153), Expect = 1e-09
Identities = 30/73 (41%), Positives = 43/73 (58%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
P FG+ISH+IS + F +V HH++T G+++DTRAYFTS
Sbjct: 255 PAFGVISHVISTNYCRN-LFGNQSMILAMGCIAVLGSLVWVHHMYTTGLEVDTRAYFTST 313
Query: 689 TIIIAVPTGIKIF 727
TI+I++PTG K+F
Sbjct: 314 TILISIPTGTKVF 326
Score = 61.3 bits (142), Expect = 2e-08
Identities = 30/84 (35%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 180
GN +P++ G+P++A+PRIN+I E G GTG T+YPPLS+++
Sbjct: 84 GNYFLPILCGSPELAYPRINSISLLLQPIAFVLVILSTAAEFGGGTGWTLYPPLSTSLMS 143
Query: 181 RGR-SVDLAIFSLHLAGISSIIGA 249
+VD+ IF L ++G++SI+ +
Sbjct: 144 LSPVAVDVIIFGLLVSGVASIMSS 167
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 70.1 bits (164), Expect = 5e-11
Identities = 38/83 (45%), Positives = 47/83 (56%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 180
G L PL +GAP +A PR+ N+ F + G G VYPP SS +AH
Sbjct: 69 GXXLXPLXVGAPXMAXPRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAH 128
Query: 181 RGRSVDLAIFSLHLAGISSIIGA 249
+VDL IF LHLAGISS +G+
Sbjct: 129 SSGAVDLGIFXLHLAGISSXLGS 151
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 66.1 bits (154), Expect = 8e-10
Identities = 31/67 (46%), Positives = 41/67 (61%)
Frame = +3
Query: 306 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 485
+PLF A+ T+ A A+ +L D TSFF+P GGGDP++YQHLF F+ H
Sbjct: 192 MPLFCWAMLATSSLILLSTPVLASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSH 251
Query: 486 PEVYILI 506
P VYI+I
Sbjct: 252 PAVYIMI 258
Score = 50.0 bits (114), Expect = 6e-05
Identities = 29/73 (39%), Positives = 37/73 (50%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
P FG+IS +I +K F IV AHH+FT G R +F +
Sbjct: 260 PFFGVISEVIPVH-ARKPIFGYRAIAYSSLAISFLGLIVWAHHMFTSGTPGWLRMFFMAT 318
Query: 689 TIIIAVPTGIKIF 727
T++IAVPTGIKIF
Sbjct: 319 TMLIAVPTGIKIF 331
Score = 47.2 bits (107), Expect = 4e-04
Identities = 32/82 (39%), Positives = 40/82 (48%)
Frame = +1
Query: 4 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 183
N L+PL++G D+AFPR+N + F V G T YPPLS
Sbjct: 94 NYLIPLMVGTEDMAFPRLNAVAFWLTPPGGILLISSFFV-GAPQAGWTSYPPLSLLSGKW 152
Query: 184 GRSVDLAIFSLHLAGISSIIGA 249
G +L I SL L G SSI+GA
Sbjct: 153 GE--ELWILSLLLVGTSSILGA 172
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 65.3 bits (152), Expect = 1e-09
Identities = 34/71 (47%), Positives = 42/71 (59%)
Frame = +3
Query: 294 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 473
+ +++PLFV + AF A LL DR+ T FF P GGD +L+QHLF
Sbjct: 195 TLNRMPLFVWMQLVVAFILIFAFPVLTVATIQLLFDRHFGTRFFLPNLGGDAVLWQHLFW 254
Query: 474 FFGHPEVYILI 506
FFGHPEVYILI
Sbjct: 255 FFGHPEVYILI 265
Score = 49.6 bits (113), Expect = 8e-05
Identities = 27/73 (36%), Positives = 38/73 (52%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
P GIIS ++ +K F F+V AHH+F VG+ A+F +A
Sbjct: 267 PTMGIISEVLPTF-SRKPIFGYAFVAYSGVAIGFLGFLVWAHHMFAVGLGPLANAFFGAA 325
Query: 689 TIIIAVPTGIKIF 727
+ +IAVPTG+KIF
Sbjct: 326 SFLIAVPTGVKIF 338
Score = 46.4 bits (105), Expect = 7e-04
Identities = 27/83 (32%), Positives = 37/83 (44%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 180
GN +VPL++GA D+AFPR+N + V G Y PL+
Sbjct: 97 GNYMVPLMIGARDMAFPRLNALSIWLFIFGGLMLYVSFFVGGAPNVGWFAYAPLTQKQFA 156
Query: 181 RGRSVDLAIFSLHLAGISSIIGA 249
VD I + L G++SI GA
Sbjct: 157 PTAGVDYWIVGIGLTGVASIAGA 179
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 65.3 bits (152), Expect = 1e-09
Identities = 31/45 (68%), Positives = 35/45 (77%)
Frame = +1
Query: 115 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSIIGA 249
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SSI+GA
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASSIMGA 56
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 65.3 bits (152), Expect = 1e-09
Identities = 27/61 (44%), Positives = 38/61 (62%)
Frame = +3
Query: 324 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 503
++ +T+F ++ DR+ NT FF+ + GDP+LYQHLF FFGHPEVYI+
Sbjct: 193 SIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYIM 252
Query: 504 I 506
I
Sbjct: 253 I 253
Score = 57.2 bits (132), Expect = 4e-07
Identities = 30/83 (36%), Positives = 47/83 (56%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 180
GN L P++LG D+ +PR+N +E G+GTG T+YPPLS+++++
Sbjct: 87 GNYLYPVLLGYCDVVYPRVNLYSLLFQPIGFVLVVSSIYLEIGSGTGWTLYPPLSTSLSN 146
Query: 181 RGRSVDLAIFSLHLAGISSIIGA 249
G +D IF L AGI+S + +
Sbjct: 147 VG--IDFIIFGLLAAGIASTLSS 167
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 64.9 bits (151), Expect = 2e-09
Identities = 32/71 (45%), Positives = 42/71 (59%)
Frame = +3
Query: 294 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 473
S ++PLFV + + A A+ +LL DR L ++FFDP GG +L+QH F
Sbjct: 196 SLQRVPLFVWMMLMQAILIILALPALNSALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFW 255
Query: 474 FFGHPEVYILI 506
FGHPEVYILI
Sbjct: 256 IFGHPEVYILI 266
Score = 48.0 bits (109), Expect = 2e-04
Identities = 28/82 (34%), Positives = 38/82 (46%)
Frame = +1
Query: 4 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 183
N VPL++GA D+AFPR+N+ F + + G Y PLSS
Sbjct: 99 NYFVPLMIGARDVAFPRLNSFGFWMFFFGAALLHFSFLTGSAPNAGWFSYVPLSSKAYSS 158
Query: 184 GRSVDLAIFSLHLAGISSIIGA 249
+ VD I L + GI S+ GA
Sbjct: 159 LQGVDYWIIGLLIMGIGSVSGA 180
Score = 47.2 bits (107), Expect = 4e-04
Identities = 24/73 (32%), Positives = 38/73 (52%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
PGFG+IS +I +K + + V AHH+F VG+ + +F
Sbjct: 268 PGFGMISEVIPVF-SRKPIYGYTFVAASSVAIVLLGYGVWAHHMFAVGLGMYADIFFAVG 326
Query: 689 TIIIAVPTGIKIF 727
+++IA+PTGIK+F
Sbjct: 327 SLLIAIPTGIKVF 339
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 64.9 bits (151), Expect = 2e-09
Identities = 38/83 (45%), Positives = 47/83 (56%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 180
GN LVPL+LGAPD+AFPR+NN+ F + G + PL
Sbjct: 63 GNWLVPLMLGAPDMAFPRMNNMSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVTIS 120
Query: 181 RGRSVDLAIFSLHLAGISSIIGA 249
G SVDLAIF LHLAG+SSI+G+
Sbjct: 121 AGPSVDLAIFPLHLAGVSSILGS 143
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 64.1 bits (149), Expect = 3e-09
Identities = 30/73 (41%), Positives = 44/73 (60%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
P FG++SH + + G + + V AHH+FTVG+D+DTR YF+SA
Sbjct: 7 PVFGLVSHSLHRG-GLFSLYNMLGMVYAMIAIAVVGYFVWAHHMFTVGLDVDTRVYFSSA 65
Query: 689 TIIIAVPTGIKIF 727
T++IA+PT IK+F
Sbjct: 66 TLLIALPTSIKVF 78
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 63.3 bits (147), Expect = 6e-09
Identities = 24/45 (53%), Positives = 36/45 (80%)
Frame = +3
Query: 372 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 506
AGA+T+L D+ L T+FF+PA GGDP++YQ++F F+ HP VY+ +
Sbjct: 159 AGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQV 203
Score = 48.4 bits (110), Expect = 2e-04
Identities = 31/83 (37%), Positives = 41/83 (49%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 180
GN L+PL++GA D+AFPR+N + + I N T T YPP S N +
Sbjct: 37 GNFLLPLMIGAKDVAFPRLNALSWWAFFAANVLFLMTLIPGNHIMTMWTGYPPFSLN--N 94
Query: 181 RGRSVDLAIFSLHLAGISSIIGA 249
L +F +HL G SSI A
Sbjct: 95 DAGVTALYVFVMHLLGASSIATA 117
Score = 43.6 bits (98), Expect = 0.005
Identities = 26/73 (35%), Positives = 34/73 (46%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
P FG S II ++ F F + HH+F G+ TR F+
Sbjct: 205 PVFGFYSEIIPVF-ARRPLFGYTSMVFAVWAITAVSFFLWIHHMFVSGVPNWTRVLFSYT 263
Query: 689 TIIIAVPTGIKIF 727
T++IAVPTGIKIF
Sbjct: 264 TLLIAVPTGIKIF 276
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 63.3 bits (147), Expect = 6e-09
Identities = 28/70 (40%), Positives = 38/70 (54%)
Frame = +3
Query: 297 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 476
F ++P+FV G +LL D + TSFF P GGGDP+L+QH F F
Sbjct: 204 FFRMPVFVWTAWAAQTIQLIGLPALTGGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWF 263
Query: 477 FGHPEVYILI 506
+ HP VY+L+
Sbjct: 264 YSHPAVYVLV 273
Score = 47.6 bits (108), Expect = 3e-04
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Frame = +1
Query: 4 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLS--SNI 174
N L+P ++GAPD+AFP++N F G A +G YPP+S + +
Sbjct: 103 NLLIPTMIGAPDMAFPKLNAAAFWLVPVFSIVLMGSFFAPGGPASSGWWSYPPMSLQNPL 162
Query: 175 AHRGRSVDLAIFSLHLAGISSIIGA 249
H L I ++ L+GISSI+GA
Sbjct: 163 GHFINGEFLWILAVALSGISSIMGA 187
Score = 39.9 bits (89), Expect = 0.063
Identities = 24/73 (32%), Positives = 32/73 (43%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
P FGI S + +K F IV AHH+F G R F
Sbjct: 275 PVFGIFSELFPVY-ARKPLFGYRFVAIASFGITFLSLIVWAHHMFYTGTPNWMRHIFMFT 333
Query: 689 TIIIAVPTGIKIF 727
T++IA+PTG+K+F
Sbjct: 334 TMLIAIPTGVKVF 346
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 63.3 bits (147), Expect = 6e-09
Identities = 28/43 (65%), Positives = 34/43 (79%)
Frame = +3
Query: 378 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 506
A+ +LL DRN T+FF AGG DPI +QHLF FFGHPEVY+L+
Sbjct: 260 ALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLV 301
Score = 51.2 bits (117), Expect = 3e-05
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVEN--GAGTG*TVYPPLSSNI 174
GN +PL++ A D+AFPRIN I F ++ A T T+Y PLS +
Sbjct: 134 GNYFIPLLIDADDMAFPRINAIAFWLLPPGAILIWSGFLIPGIATAQTSWTMYTPLSLQM 193
Query: 175 AHRGRSVDLAIFSLHLAGISSIIGA 249
+ +VD+ + LHL G+S+ +GA
Sbjct: 194 S--SPAVDMMMLGLHLTGVSATMGA 216
Score = 44.8 bits (101), Expect = 0.002
Identities = 24/73 (32%), Positives = 38/73 (52%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
P GI+S I+ + G+K F F V AHH+FT GID R+ F +
Sbjct: 303 PPMGIVSLILPKFSGRK-LFGFKFVVYSTLAIGVLSFGVWAHHMFTTGIDPRIRSSFMAV 361
Query: 689 TIIIAVPTGIKIF 727
++ I++P+ +K+F
Sbjct: 362 SLAISIPSAVKVF 374
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 62.9 bits (146), Expect = 8e-09
Identities = 28/43 (65%), Positives = 35/43 (81%)
Frame = +3
Query: 378 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 506
AIT LL DRN+N++ +D G DP+LYQHLF FFGHPEVY++I
Sbjct: 217 AITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEVYVII 257
Score = 56.8 bits (131), Expect = 5e-07
Identities = 29/73 (39%), Positives = 43/73 (58%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
P FG+ S I++ K+ F + V AHH+FTVG+DID+R+YF+ A
Sbjct: 259 PVFGLTSLILTSII-HKDIFGREGMMYCIISIGVVGYFVWAHHMFTVGLDIDSRSYFSIA 317
Query: 689 TIIIAVPTGIKIF 727
T II++PT +K+F
Sbjct: 318 TSIISIPTSVKMF 330
Score = 54.4 bits (125), Expect = 3e-06
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI-VENGAGTG*TVYPPLSSNIA 177
GN L+P+++G +++ PR+N I F + + +G T+YPPLS+ A
Sbjct: 89 GNYLIPMLIGTSELSMPRMNGISFWMLIVGVVIFVISNVLMSKPISSGWTLYPPLSTRDA 148
Query: 178 HR-GRSVDLAIFSLHLAGISSIIGA 249
G ++DL++ +H+ GISS IG+
Sbjct: 149 DNIGVNIDLSLLVVHVLGISSTIGS 173
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 62.5 bits (145), Expect = 1e-08
Identities = 30/55 (54%), Positives = 36/55 (65%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 165
GN LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+
Sbjct: 80 GNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
Score = 44.0 bits (99), Expect = 0.004
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +2
Query: 647 VGIDIDTRAYFTSATIIIAVPTGIKIF 727
VG+ + RAYFTSAT+IIA+PTGIK F
Sbjct: 296 VGMXVXPRAYFTSATMIIAIPTGIKAF 322
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 62.5 bits (145), Expect = 1e-08
Identities = 33/76 (43%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Frame = +3
Query: 294 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA-----GGGDPILY 458
++ +LPL + + +TA A +LL DR+ T FF GGGDPIL+
Sbjct: 210 TYMRLPLTIWGLWLTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILW 269
Query: 459 QHLF*FFGHPEVYILI 506
QHLF FGHPEVYI+I
Sbjct: 270 QHLFWIFGHPEVYIMI 285
Score = 58.0 bits (134), Expect = 2e-07
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLSSNIA 177
GN L+PL++GA D+AFPR+N F G AG G T Y PLS+N+
Sbjct: 111 GNLLIPLMIGARDMAFPRLNMYSFWTFLLSQLLVLASFFAPLGSAGAGWTTYTPLSTNVG 170
Query: 178 HRGRSVDLAIFSLHLAGISSIIGA 249
G L + ++ + G+SS +GA
Sbjct: 171 MPGMGQTLVVAAIFVTGVSSTMGA 194
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 62.1 bits (144), Expect = 1e-08
Identities = 27/43 (62%), Positives = 34/43 (79%)
Frame = +3
Query: 378 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 506
A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHPEVY+LI
Sbjct: 366 AVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHPEVYVLI 408
Score = 35.9 bits (79), Expect = 1.0
Identities = 13/36 (36%), Positives = 26/36 (72%)
Frame = +2
Query: 617 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKI 724
++V HH++ VG+D +R +++ TI+I++P IK+
Sbjct: 445 YLVWGHHMYLVGLDHRSRTMYSTITIMISMPATIKV 480
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 60.9 bits (141), Expect = 3e-08
Identities = 33/75 (44%), Positives = 42/75 (56%)
Frame = +3
Query: 294 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 473
S +++P+FV AV + +F A +L DR FF A GDPIL+QHLF
Sbjct: 200 SLNRMPIFVWAVLVMSFMIVFALPPLVIASLMLALDRMAGMHFFT-AASGDPILWQHLFW 258
Query: 474 FFGHPEVYILIFQDL 518
FFGHPEVYI+ L
Sbjct: 259 FFGHPEVYIIFIPAL 273
Score = 35.9 bits (79), Expect = 1.0
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +2
Query: 632 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 727
HH+FT G+ +FT+++ +IA+P+G++IF
Sbjct: 311 HHMFTAGLPQLGSNFFTASSAMIAIPSGVQIF 342
Score = 33.9 bits (74), Expect = 4.2
Identities = 19/80 (23%), Positives = 33/80 (41%)
Frame = +1
Query: 10 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 189
++PL+LG D+ FPR+N + ++ G YPPL+ G
Sbjct: 105 IIPLMLGTRDMTFPRLNAFGYYIYLIAGVMMYAALLLRIAPDAGWFSYPPLAGASFSPGL 164
Query: 190 SVDLAIFSLHLAGISSIIGA 249
+D + IS+++ A
Sbjct: 165 GLDFYTTVVTFMEISALVAA 184
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 60.1 bits (139), Expect = 6e-08
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = +3
Query: 303 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL-NTSFFDPAGGGDPILYQHLF*FF 479
++PLFV A+ T+ G + +L+T NL FDPA GGDP+L+QHLF F+
Sbjct: 206 KMPLFVWAIYATS-CIQVLATPVIGLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFY 264
Query: 480 GHPEVYILI 506
HP VYI++
Sbjct: 265 SHPAVYIMV 273
Score = 45.6 bits (103), Expect = 0.001
Identities = 28/81 (34%), Positives = 40/81 (49%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 180
GN ++PL+LGA D+AFPR+N + ++ G TG T Y P S AH
Sbjct: 109 GNFMLPLMLGAKDVAFPRLNLLSL-YIYLAGAVLALWGMLNGGLDTGWTFYTPYS---AH 164
Query: 181 RGRSVDLAIFSLHLAGISSII 243
+V +F + G SSI+
Sbjct: 165 TTTTVAPVLFGAFIIGFSSIV 185
Score = 33.1 bits (72), Expect = 7.3
Identities = 19/73 (26%), Positives = 29/73 (39%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
P FG++S +++ +K F F HH+F G F
Sbjct: 275 PSFGVMSEVVATY-SRKNIFGYRAVAYSSLGIAFVGFFAWGHHMFVSGQSTFAGGLFGVL 333
Query: 689 TIIIAVPTGIKIF 727
T+I+ V T IK+F
Sbjct: 334 TMIVGVFTAIKVF 346
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 60.1 bits (139), Expect = 6e-08
Identities = 31/71 (43%), Positives = 41/71 (57%)
Frame = +3
Query: 294 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 473
S Q+PL + ++ A A+ +LLTDR + FF+PA GGDPI Y HLF
Sbjct: 179 SLGQVPLLAWSYLSSSLIVLVALPTFAAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFW 238
Query: 474 FFGHPEVYILI 506
F HPEVY+L+
Sbjct: 239 FTFHPEVYVLV 249
Score = 35.5 bits (78), Expect = 1.4
Identities = 26/83 (31%), Positives = 40/83 (48%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 180
GN VP+++ D+A+P++N I F + T PP S I+
Sbjct: 87 GNYFVPIMVRYKDMAYPKLNAIAFWMIPPAGALVWLGFADFSWYAT-----PPYSV-ISA 140
Query: 181 RGRSVDLAIFSLHLAGISSIIGA 249
G + D+ IF L + GISSI+G+
Sbjct: 141 PGPAADMWIFGLKILGISSILGS 163
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 59.7 bits (138), Expect = 7e-08
Identities = 29/43 (67%), Positives = 33/43 (76%)
Frame = +3
Query: 378 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 506
AI +LL DRN TSFF AG G IL+QHLF FFGHPEVYI++
Sbjct: 292 AIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYIIV 332
Score = 49.6 bits (113), Expect = 8e-05
Identities = 37/90 (41%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Frame = +1
Query: 4 N*LVPLILGAPDIAFPRINNIRF--XXXXXXXXXXXXXXIVE-NGAGTG*TVYPPLS--- 165
N L+PL++GA D+AFPRIN I F I E A TG T+Y PLS
Sbjct: 161 NYLIPLLIGADDMAFPRINAIAFWLLPPAALLIWAGFFPIPEVIPAQTGWTMYTPLSVGE 220
Query: 166 --SNIAHRGRSVDLAIFSLHLAGISSIIGA 249
N A+ G VDL + LHL+G+S+ +G+
Sbjct: 221 GMGNQANAG--VDLMLLGLHLSGVSATMGS 248
Score = 44.4 bits (100), Expect = 0.003
Identities = 25/73 (34%), Positives = 37/73 (50%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
P GIIS+I+ + G++ F F V AHH+F G+D RA F +
Sbjct: 334 PPMGIISYILPRFSGRR-LFGFKFVVYSTLAIGVLSFGVWAHHMFATGLDPRLRASFMAV 392
Query: 689 TIIIAVPTGIKIF 727
++ IAVP+ +K F
Sbjct: 393 SLAIAVPSAVKTF 405
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 59.3 bits (137), Expect = 1e-07
Identities = 30/68 (44%), Positives = 36/68 (52%)
Frame = +3
Query: 303 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 482
++PLFV TA + +R T FFD A GG P+L+Q LF FFG
Sbjct: 178 KMPLFVWGFFTTAILMIIAMPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLFWFFG 237
Query: 483 HPEVYILI 506
HPEVYILI
Sbjct: 238 HPEVYILI 245
Score = 32.7 bits (71), Expect = 9.6
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +1
Query: 4 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS-SNIAH 180
N LVP ++GA D+ +P+IN + F ++ G +Y PLS +
Sbjct: 80 NYLVPRMIGAHDLYWPKINALSFWMLVPAVILAAISPLL-GAVDLGWYMYAPLSVETTVN 138
Query: 181 RGRSVDLAIFSLHLAGISSII 243
G +L +L L+G+SS +
Sbjct: 139 YGLGTNLIQIALILSGLSSTL 159
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 59.3 bits (137), Expect = 1e-07
Identities = 32/73 (43%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = +3
Query: 303 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-DPAGGGDPILYQHLF*FF 479
++P+F ++ T +LL DRNL T FF +PAGG +L+ HLF FF
Sbjct: 189 KMPMFTWSILFTVILMLWAFPPLMVGGALLLLDRNLGTEFFLNPAGGA--LLWDHLFWFF 246
Query: 480 GHPEVYILIFQDL 518
GHPEVYIL+F L
Sbjct: 247 GHPEVYILLFPAL 259
Score = 50.0 bits (114), Expect = 6e-05
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +1
Query: 4 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAH 180
N +VPL +GA D+AFPR+N + + E+GA G T+Y PL++ I
Sbjct: 88 NYIVPLQIGARDLAFPRLNALSYWLYLLSGLVLLASFFTESGAPNVGWTLYAPLTARIYT 147
Query: 181 RGRSVDLAIFSLHLAGISSIIG 246
G +DLA ++ L +S +G
Sbjct: 148 PGIGLDLAALAIFLFSLSVTLG 169
Score = 39.1 bits (87), Expect = 0.11
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +2
Query: 506 FPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTS 685
FP G ++ +IS GK + F+V HH+F G +I TR +++
Sbjct: 256 FPALGAMADVISTFSGKP-IYAKRYILTAFLIATIISFVVWMHHMFITGTNIYTRLFYSI 314
Query: 686 ATIIIAVP 709
TI+I++P
Sbjct: 315 TTILISIP 322
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 58.8 bits (136), Expect = 1e-07
Identities = 30/50 (60%), Positives = 36/50 (72%), Gaps = 5/50 (10%)
Frame = +3
Query: 372 AGAITILLTDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPEVYILI 506
AGAI +LL +R+L FF DPA GDP L+QH+F FFGHPEVYIL+
Sbjct: 209 AGAIMLLL-ERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYILV 257
Score = 47.6 bits (108), Expect = 3e-04
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +1
Query: 4 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAH 180
N LVP ++GAPD+ +PRIN + F + ++G G T+YPPLS+
Sbjct: 86 NILVPKLIGAPDMYWPRINALSFWMQVPATVFMWSSLLFWQHGDSIGWTLYPPLST--IS 143
Query: 181 RGRSVDLAIFSLHLAGISSII 243
+ VDL + + +AG SS +
Sbjct: 144 KSIGVDLILLGIIIAGFSSTL 164
Score = 41.5 bits (93), Expect = 0.021
Identities = 20/73 (27%), Positives = 33/73 (45%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
P G++S +I Q ++ + F V HH+FT D R A
Sbjct: 259 PAMGLVSEVI-QRMARRRAYGYTAIAISSVAIASISFAVWMHHMFTAVQDFAPRVAMAIA 317
Query: 689 TIIIAVPTGIKIF 727
T+ +A+P+G+K+F
Sbjct: 318 TMAVAIPSGVKVF 330
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 58.4 bits (135), Expect = 2e-07
Identities = 37/85 (43%), Positives = 46/85 (54%), Gaps = 10/85 (11%)
Frame = +3
Query: 294 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP----AG------GG 443
SF +LPL + A ITA A +L+ DR+L TSFF AG GG
Sbjct: 229 SFTRLPLTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIYIAGEALHHQGG 288
Query: 444 DPILYQHLF*FFGHPEVYILIFQDL 518
P+L+QHLF F GHPEVYI++ L
Sbjct: 289 SPVLFQHLFWFLGHPEVYIVLIPAL 313
Score = 41.1 bits (92), Expect = 0.027
Identities = 24/73 (32%), Positives = 34/73 (46%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
P GI S +I+ +K F FIV AHH+F G++ + F
Sbjct: 311 PALGITSEVIATN-ARKPIFGYKAMIGSILGIAVLSFIVWAHHMFVTGMNPFLGSVFMFL 369
Query: 689 TIIIAVPTGIKIF 727
T+IIAVP+ +K F
Sbjct: 370 TLIIAVPSAVKSF 382
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 58.0 bits (134), Expect = 2e-07
Identities = 27/73 (36%), Positives = 37/73 (50%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
P FGI+SHI F +V AHH+F VG D+ T +F+S
Sbjct: 13 PVFGIVSHICMTFTNNDSLFGYYGLVLAMLAIVCLGSVVWAHHMFMVGYDVHTAVFFSSV 72
Query: 689 TIIIAVPTGIKIF 727
T++I +PTGIK+F
Sbjct: 73 TMVIGIPTGIKVF 85
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 57.2 bits (132), Expect = 4e-07
Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Frame = +3
Query: 300 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 479
DQ+ LF ++ IT AG IT+LL+DRN N FF GG PIL+Q++ F
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLF 71
Query: 480 GHPEVYILI----FQDL 518
GH +V LI +QDL
Sbjct: 72 GHTDVLFLILFWFYQDL 88
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 57.2 bits (132), Expect = 4e-07
Identities = 25/71 (35%), Positives = 41/71 (57%)
Frame = +3
Query: 294 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 473
++ +LPLF + + + +++ DR T+FF+P GG+ ++++HLF
Sbjct: 186 TYMRLPLFTWTTFVASALILFAFPPLTVGLALMMLDRLFGTNFFNPELGGNTVIWEHLFW 245
Query: 474 FFGHPEVYILI 506
FGHPEVYILI
Sbjct: 246 IFGHPEVYILI 256
Score = 49.6 bits (113), Expect = 8e-05
Identities = 28/73 (38%), Positives = 35/73 (47%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
P FGI S +I +K F F+V HH+FT G+ A F A
Sbjct: 258 PAFGIFSEVIPVF-ARKRLFGYSSMVFAIVLIGFLGFMVWVHHMFTTGLGPIANAIFAVA 316
Query: 689 TIIIAVPTGIKIF 727
T+ IA+PTGIKIF
Sbjct: 317 TMAIAIPTGIKIF 329
Score = 37.9 bits (84), Expect = 0.26
Identities = 21/80 (26%), Positives = 37/80 (46%)
Frame = +1
Query: 4 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 183
N +VPL +GA D++FP +N + F + G T Y LS + +
Sbjct: 91 NAVVPLQIGARDVSFPFLNALGFWLFFFGHIFLNLSWFLGGAPDAGWTSYASLS--LHSK 148
Query: 184 GRSVDLAIFSLHLAGISSII 243
G +D + L ++G+ ++I
Sbjct: 149 GHGIDFFVLGLQISGLGTLI 168
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 56.8 bits (131), Expect = 5e-07
Identities = 29/70 (41%), Positives = 39/70 (55%)
Frame = +3
Query: 294 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 473
S ++P+F A+ I A A +L +R+ FF GGDP+L+QHLF
Sbjct: 203 SLTRMPIFAWAMLIFAAMIMIAFPAVILATMLLEIERSFGWPFFTAERGGDPLLWQHLFW 262
Query: 474 FFGHPEVYIL 503
FFGHPEVYI+
Sbjct: 263 FFGHPEVYII 272
Score = 37.9 bits (84), Expect = 0.26
Identities = 13/32 (40%), Positives = 25/32 (78%)
Frame = +2
Query: 632 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 727
HH+FT GI + +F++A++ +A+P+GI++F
Sbjct: 315 HHMFTTGIPSLSLGFFSAASMAVAIPSGIQVF 346
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 56.8 bits (131), Expect = 5e-07
Identities = 24/68 (35%), Positives = 38/68 (55%)
Frame = +3
Query: 303 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 482
+LPLFV ++ T+ ++ ++ + FDPA GGDP+L+QH F F+
Sbjct: 199 RLPLFVWSIYATSVIQILATPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWFYS 258
Query: 483 HPEVYILI 506
HP VYI++
Sbjct: 259 HPAVYIMV 266
Score = 44.8 bits (101), Expect = 0.002
Identities = 29/81 (35%), Positives = 42/81 (51%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 180
GN L+P+++GA D+AFP++N + F +V+ GA TG T Y P S+
Sbjct: 102 GNFLLPIMIGAKDVAFPKLNLLSF-YVYLAGAVVALFGMVQGGADTGWTFYTPYSTTTIT 160
Query: 181 RGRSVDLAIFSLHLAGISSII 243
+ V L F L G SSI+
Sbjct: 161 KVVPVLLGAFIL---GFSSIL 178
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 56.8 bits (131), Expect = 5e-07
Identities = 28/71 (39%), Positives = 38/71 (53%)
Frame = +3
Query: 294 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 473
S D+LP+ V + + A +L DRN T FFD A GG P+L+QHLF
Sbjct: 213 SIDRLPIIVWGTLTASVSNLVAVPSVSLAFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFW 272
Query: 474 FFGHPEVYILI 506
F HP VY+++
Sbjct: 273 MFAHPWVYVVV 283
Score = 33.1 bits (72), Expect = 7.3
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +2
Query: 617 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 727
F V HH+F GI A+F +A+++I++P+ + +F
Sbjct: 320 FEVWVHHMFATGIAPLALAFFGAASMLISIPSAVAVF 356
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 56.0 bits (129), Expect = 9e-07
Identities = 27/68 (39%), Positives = 38/68 (55%)
Frame = +3
Query: 303 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 482
++P+FV +T+ A+ +L+ DR +FF+ GG + YQHLF FG
Sbjct: 200 KMPVFVWTTLVTSAIIIFAFPSVTVALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFG 259
Query: 483 HPEVYILI 506
HPEVYILI
Sbjct: 260 HPEVYILI 267
Score = 47.6 bits (108), Expect = 3e-04
Identities = 27/73 (36%), Positives = 36/73 (49%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
P GIIS +I +K F F V +HH+FTVG+ + F+
Sbjct: 269 PAMGIISEVIPVH-ARKMLFGYSVMVFSTALIGFMGFTVWSHHMFTVGMGPVVNSIFSLT 327
Query: 689 TIIIAVPTGIKIF 727
T+ IAVPTG+KIF
Sbjct: 328 TMAIAVPTGVKIF 340
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 56.0 bits (129), Expect = 9e-07
Identities = 25/41 (60%), Positives = 30/41 (73%)
Frame = +3
Query: 399 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIFQDLV 521
+R + FFDP GGDP+L+QHLF FGHPEVYI IF L+
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYI-IFLPLI 293
Score = 35.5 bits (78), Expect = 1.4
Identities = 12/32 (37%), Positives = 23/32 (71%)
Frame = +2
Query: 632 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 727
HH+FT G+ + +F++A+ + +PTGI++F
Sbjct: 331 HHMFTTGLPALSLGFFSAASEAVVIPTGIQLF 362
Score = 33.9 bits (74), Expect = 4.2
Identities = 20/80 (25%), Positives = 36/80 (45%)
Frame = +1
Query: 10 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 189
L+P +LGA D+ FPR++ + + + +G +YPPL++ G
Sbjct: 126 LLPALLGARDLPFPRLSAYGYWCFLIGGVFVMGSILFDAAPKSGWFMYPPLATQ--DEGL 183
Query: 190 SVDLAIFSLHLAGISSIIGA 249
D+ + L ++SI A
Sbjct: 184 GSDIWLLGLSFIEVASIAAA 203
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 54.8 bits (126), Expect = 2e-06
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = +3
Query: 297 FDQLPLFV*AVGITAFXXXXXXXXXAG-AITILLTDRNLNTSFFDPAGGGDPILYQHLF* 473
+++L +FV A + AF G A+T+L D+ + T FFD A GGD + YQ+LF
Sbjct: 178 WNKLNIFVWAT-LAAFVLQLIFVPVLGTAVTMLTFDKYIGTHFFDAAAGGDALTYQNLFW 236
Query: 474 FFGHPEVYIL 503
F+ HP VY++
Sbjct: 237 FYSHPAVYVI 246
Score = 37.9 bits (84), Expect = 0.26
Identities = 25/81 (30%), Positives = 37/81 (45%)
Frame = +1
Query: 4 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 183
N +PL++GA D+AFPR+N + + + T YPP S I H
Sbjct: 83 NYFIPLMIGAKDVAFPRVNALSVWLFYAGVLVALTTFFIPDPPDIMWTGYPPYSI-ITHG 141
Query: 184 GRSVDLAIFSLHLAGISSIIG 246
+ FS+ L G +SI+G
Sbjct: 142 NTA--FYTFSVLLLGFASILG 160
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 54.8 bits (126), Expect = 2e-06
Identities = 28/70 (40%), Positives = 38/70 (54%)
Frame = +3
Query: 294 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 473
S ++P+ + + TAF +L +R L FFD GGDP+L+QHLF
Sbjct: 219 SLTKMPILMWYLLATAFMIAIAFPPLIIGSILLEAERLLGLPFFDHTLGGDPLLWQHLFW 278
Query: 474 FFGHPEVYIL 503
FGHPEVYI+
Sbjct: 279 LFGHPEVYII 288
Score = 40.7 bits (91), Expect = 0.036
Identities = 22/80 (27%), Positives = 37/80 (46%)
Frame = +1
Query: 10 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 189
L+PL++GA D+ FPR+ + + + G +Y PLS++ G
Sbjct: 124 LIPLMIGARDLVFPRLGAFGYYCYLFGGIIVLSSFLFDAAPDGGWFMYVPLSTSAYTEGL 183
Query: 190 SVDLAIFSLHLAGISSIIGA 249
S D + + LA I+S+ A
Sbjct: 184 SADFWLIGITLAEIASVTAA 203
Score = 39.9 bits (89), Expect = 0.063
Identities = 15/33 (45%), Positives = 26/33 (78%)
Frame = +2
Query: 629 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 727
AHH+F G+ I + + F++A+ ++AVPTG++IF
Sbjct: 330 AHHMFATGLPILSLSLFSAASTMVAVPTGVQIF 362
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 54.8 bits (126), Expect = 2e-06
Identities = 23/30 (76%), Positives = 29/30 (96%)
Frame = +2
Query: 638 IFTVGIDIDTRAYFTSATIIIAVPTGIKIF 727
++ VG+D+DTRAYFT+AT+IIAVPTGIKIF
Sbjct: 1 MYVVGMDVDTRAYFTAATMIIAVPTGIKIF 30
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 54.8 bits (126), Expect = 2e-06
Identities = 22/68 (32%), Positives = 40/68 (58%)
Frame = +3
Query: 303 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 482
++P++V +V + A ++L +R + S+F+PA GGDP+L+Q F F+
Sbjct: 190 KMPIYVWSVFAASVLNLFSLAGLTAATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYS 249
Query: 483 HPEVYILI 506
HP VY+++
Sbjct: 250 HPTVYVML 257
Score = 42.3 bits (95), Expect = 0.012
Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIA 177
GN +VPL+LGA D+A PR+N + GA G T Y P S A
Sbjct: 91 GNFVVPLMLGARDVALPRVNAFSYWAFLGAIVLALMSYFFPGGAPSVGWTFYYPFS---A 147
Query: 178 HRGRSVDLAIFSLHLAGISSIIG 246
VD + ++ L G SS++G
Sbjct: 148 QSESGVDFYLAAILLLGFSSLLG 170
Score = 38.7 bits (86), Expect = 0.15
Identities = 24/73 (32%), Positives = 34/73 (46%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
P GI++ + S +K F +V AHH+FTVG + F
Sbjct: 259 PYLGILAEVASTF-ARKPLFGYRQMVWAQMGIVVLGTMVWAHHMFTVGESTLFQIAFAFF 317
Query: 689 TIIIAVPTGIKIF 727
T +IAVPTG+K+F
Sbjct: 318 TALIAVPTGVKLF 330
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 54.8 bits (126), Expect = 2e-06
Identities = 29/58 (50%), Positives = 34/58 (58%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 174
GN LVP+++GAPD+AFPR+NNI F VE GAGTG TV LS I
Sbjct: 79 GNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVKCKLSQII 136
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 54.4 bits (125), Expect = 3e-06
Identities = 27/73 (36%), Positives = 39/73 (53%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
P FGI S ++S GK+ F F+V HH FT+G + A+F A
Sbjct: 294 PAFGIFSEVVSTFAGKR-LFGHKSMIYASGAISVLGFMVWLHHFFTMGSGANVNAFFGIA 352
Query: 689 TIIIAVPTGIKIF 727
T+II++PTG+K+F
Sbjct: 353 TMIISIPTGVKLF 365
Score = 46.4 bits (105), Expect = 7e-04
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = +3
Query: 375 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 506
GA+ +L DR L+ FF GG+ ++Y +LF +GHPEVYIL+
Sbjct: 249 GALAMLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYILV 292
Score = 46.0 bits (104), Expect = 0.001
Identities = 28/82 (34%), Positives = 41/82 (50%)
Frame = +1
Query: 4 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 183
N +VPL +GA D+AFP +N++ F V N A TG YPPL+
Sbjct: 125 NIVVPLQIGARDVAFPFLNSLSFWLLVSAVILVNLSLGVGNFARTGWVAYPPLAELGFSP 184
Query: 184 GRSVDLAIFSLHLAGISSIIGA 249
VD I++L ++GI + + A
Sbjct: 185 DVGVDYYIWALQISGIGTTLTA 206
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 53.6 bits (123), Expect = 5e-06
Identities = 27/67 (40%), Positives = 38/67 (56%)
Frame = +3
Query: 303 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 482
++P+F A+ + A A +L +R + FF GGDP+L+QHLF FFG
Sbjct: 265 RMPVFAWAMLVFALMIVFAFPAVILATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFG 324
Query: 483 HPEVYIL 503
HPEVYI+
Sbjct: 325 HPEVYII 331
Score = 35.1 bits (77), Expect = 1.8
Identities = 12/32 (37%), Positives = 24/32 (75%)
Frame = +2
Query: 632 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 727
HH+FT GI + ++F +A+ +A+P+G+++F
Sbjct: 374 HHMFTTGIPQLSLSFFQAASTAVAIPSGMQVF 405
Score = 33.9 bits (74), Expect = 4.2
Identities = 22/80 (27%), Positives = 34/80 (42%)
Frame = +1
Query: 10 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 189
L+P +LGA D+ FPR++ F V G + PPL++ G
Sbjct: 167 LLPNMLGARDLPFPRLSAYAFWAYLVGGLVFFASIFVGWAPDGGWFMNPPLTTETYSPGY 226
Query: 190 SVDLAIFSLHLAGISSIIGA 249
+ D + + IS+I GA
Sbjct: 227 NADFWLLGIGFIEISAIAGA 246
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 53.6 bits (123), Expect = 5e-06
Identities = 32/79 (40%), Positives = 42/79 (53%), Gaps = 11/79 (13%)
Frame = +3
Query: 303 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP-----------AGGGDP 449
+LPL + A+ ITA A ++L DR + T FF P AGGG P
Sbjct: 218 RLPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVVNNSPMAAGGGQP 277
Query: 450 ILYQHLF*FFGHPEVYILI 506
+L+QHLF F+ HP VYI+I
Sbjct: 278 LLWQHLFWFYSHPAVYIMI 296
Score = 46.8 bits (106), Expect = 6e-04
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVE-NGAGTG*TVYPPLS---S 168
GN L+PL++GA D+AFP +N + + + +GA G T YPPLS +
Sbjct: 113 GNFLIPLMIGADDMAFPTLNMLSYWFMWPAFFFFGGAFFCDGHGAAAGWTSYPPLSDMTT 172
Query: 169 NIAHRGRSVDLAIFSLHLAGISSIIGA 249
+ G + L + + G+SS++G+
Sbjct: 173 SAPSSGAAQTLWLLGVTTVGVSSMLGS 199
Score = 35.5 bits (78), Expect = 1.4
Identities = 21/73 (28%), Positives = 34/73 (46%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
P G++S I++ +K F FIV HH+F G++ F A
Sbjct: 298 PAMGMVSDILACF-SRKPIFGYKPMVYSICGIAGLGFIVWGHHMFVSGMNPGLGMTFMVA 356
Query: 689 TIIIAVPTGIKIF 727
T++IA+P+ +K F
Sbjct: 357 TMMIALPSAVKTF 369
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 53.6 bits (123), Expect = 5e-06
Identities = 22/33 (66%), Positives = 29/33 (87%)
Frame = +2
Query: 629 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 727
AHH+ TVG++ DTRAYF++ TI+IA+PTG KIF
Sbjct: 2 AHHMMTVGLEGDTRAYFSAMTIMIAIPTGTKIF 34
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 53.6 bits (123), Expect = 5e-06
Identities = 28/49 (57%), Positives = 32/49 (65%), Gaps = 10/49 (20%)
Frame = +3
Query: 387 ILLTDRNLNTSFFDPA----------GGGDPILYQHLF*FFGHPEVYIL 503
+LL DR L TSFF P GGG P+L+QHLF FFGHPEVYI+
Sbjct: 238 MLLLDRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVYIV 286
Score = 46.4 bits (105), Expect = 7e-04
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
P FGI+S +IS +K F F+V AHH++ G+ +F +
Sbjct: 289 PAFGIVSDLISTH-ARKNIFGYRMMVWAIVAIGALSFVVWAHHMYVSGMYPYFGFFFATT 347
Query: 689 TIIIAVPTGIKIF 727
T+IIA+PT IK++
Sbjct: 348 TLIIAIPTAIKVY 360
Score = 37.9 bits (84), Expect = 0.26
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPP 159
GN L+PL++GA D+ FP +N + + V G G G T+YPP
Sbjct: 106 GNYLIPLMVGARDMVFPYVNMLSYWVYLLAVLVLASAFFVPGGPTGAGWTLYPP 159
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 53.2 bits (122), Expect = 6e-06
Identities = 21/39 (53%), Positives = 23/39 (58%)
Frame = +1
Query: 514 IWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIYCLS 630
IWYNF YY+T K K W F NNLCY S W I +S
Sbjct: 20 IWYNFPYYYTSKSGKNCLWFFSNNLCYISYWTSSICSMS 58
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 53.2 bits (122), Expect = 6e-06
Identities = 26/67 (38%), Positives = 37/67 (55%)
Frame = +3
Query: 303 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 482
++P+F + + + A +L DR L +DPA GG +L+QHLF FFG
Sbjct: 206 RMPIFTWNIFVVSVLALLIFPLLLAAALGVLYDRKLGGHLYDPANGGS-LLWQHLFWFFG 264
Query: 483 HPEVYIL 503
HPEVY+L
Sbjct: 265 HPEVYVL 271
Score = 48.8 bits (111), Expect = 1e-04
Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +1
Query: 4 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT-G*TVYPPLSSNIAH 180
N ++PL +GAPD+AFPR+N F + GA G T+Y PLS I
Sbjct: 105 NYVLPLQIGAPDVAFPRLNAFGFWITTVGGVAMLTGFLTPGGAADFGWTMYSPLSDAIHS 164
Query: 181 RGRSVDLAIFSLHLAGISSIIGA 249
G D+ I + GI S+ A
Sbjct: 165 PGLGSDMWIVGVGATGIGSVASA 187
Score = 37.1 bits (82), Expect = 0.45
Identities = 24/73 (32%), Positives = 33/73 (45%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
P FGI+S II +K F V AHH+F G + +F+
Sbjct: 274 PFFGIVSEIIPVF-SRKPMFGYVGLIFATLSIGALSMAVWAHHMFVTGAVL--LPFFSFM 330
Query: 689 TIIIAVPTGIKIF 727
T +I+VPTG+K F
Sbjct: 331 TFLISVPTGVKFF 343
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 52.8 bits (121), Expect = 8e-06
Identities = 20/32 (62%), Positives = 28/32 (87%)
Frame = +2
Query: 632 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 727
HH+FTVG+D++T +F+S T+II VPTGIK+F
Sbjct: 53 HHMFTVGLDVNTAVFFSSVTMIIRVPTGIKVF 84
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 52.8 bits (121), Expect = 8e-06
Identities = 23/31 (74%), Positives = 29/31 (93%)
Frame = +1
Query: 157 PLSSNIAHRGRSVDLAIFSLHLAGISSIIGA 249
PL+S+IAH G SVD+AIFSLHLAG+SSI+G+
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGS 102
Score = 35.1 bits (77), Expect = 1.8
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +3
Query: 294 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDR 404
+ D++PLF+ AV IT AGAIT+LLTDR
Sbjct: 118 TLDRVPLFIWAVFITTVLLLLSLPVLAGAITMLLTDR 154
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 52.4 bits (120), Expect = 1e-05
Identities = 26/70 (37%), Positives = 36/70 (51%)
Frame = +3
Query: 294 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 473
S ++P+F +TA +L +R + FF A GGD +L+QHLF
Sbjct: 193 SLSKMPIFAWYALVTAVMILTGFPPLILGSILLELERAFDMPFFQAAAGGDALLWQHLFW 252
Query: 474 FFGHPEVYIL 503
FGHPEVYI+
Sbjct: 253 LFGHPEVYII 262
Score = 38.7 bits (86), Expect = 0.15
Identities = 23/80 (28%), Positives = 36/80 (45%)
Frame = +1
Query: 10 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 189
L+P +LG+ D+AFPR+ F + +G +YPPLSS + G
Sbjct: 98 LLPKLLGSRDLAFPRLTAYGFWCYVFGGSMMIFSLLWGIAPDSGWFMYPPLSSTLGAPGI 157
Query: 190 SVDLAIFSLHLAGISSIIGA 249
+ D + + IS+I A
Sbjct: 158 NSDFWLIGITFVEISAIAAA 177
Score = 37.1 bits (82), Expect = 0.45
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +2
Query: 632 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 727
HH+FT GI A+F++A+ ++AVPT +++F
Sbjct: 305 HHMFTTGIPHLGLAFFSAASTLVAVPTAVQLF 336
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 52.0 bits (119), Expect = 1e-05
Identities = 26/73 (35%), Positives = 37/73 (50%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
P FGI S IIS +K+ F F+V HH FT+G ++F+
Sbjct: 289 PAFGIFSEIISSF-ARKQLFGYKAMVGSIIAISVLSFLVWTHHFFTMGNSASVNSFFSIT 347
Query: 689 TIIIAVPTGIKIF 727
T+ I++PTG+KIF
Sbjct: 348 TMAISIPTGVKIF 360
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/80 (31%), Positives = 39/80 (48%)
Frame = +1
Query: 4 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 183
N +VPL +GA D+AFP +NN+ F ++ G T Y PL+SN
Sbjct: 120 NVVVPLQIGARDVAFPYLNNLSFWTFFVGAMLFNISFVIGGSPNAGWTSYMPLASNDMSP 179
Query: 184 GRSVDLAIFSLHLAGISSII 243
G + + L +AGI +++
Sbjct: 180 GPGENYYLLGLQIAGIGTLM 199
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/68 (35%), Positives = 34/68 (50%)
Frame = +3
Query: 303 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 482
++P+F IT A+ +L DR FF GG P+L+ +LF +G
Sbjct: 220 RMPMFTWTTLITMVIIVFAFPVLTVALALLSFDRLFGAHFFTLEAGGMPMLWANLFWIWG 279
Query: 483 HPEVYILI 506
HPEVYI+I
Sbjct: 280 HPEVYIVI 287
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 50.4 bits (115), Expect = 4e-05
Identities = 26/70 (37%), Positives = 36/70 (51%)
Frame = +3
Query: 294 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 473
S D++P++ +TA +L +R FF A GGD +L+QHLF
Sbjct: 193 SLDRMPIYGWYALVTATMILTGFPPLILGSILLELERAFGLPFFQVAEGGDSLLWQHLFW 252
Query: 474 FFGHPEVYIL 503
FGHPEVYI+
Sbjct: 253 LFGHPEVYII 262
Score = 37.9 bits (84), Expect = 0.26
Identities = 21/80 (26%), Positives = 37/80 (46%)
Frame = +1
Query: 10 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 189
L+P +LG+ D+A+PR++ F + +G +YPPL+S + G
Sbjct: 98 LLPKMLGSRDLAYPRLSAYGFWCYVLGGSMLIVALLAGIAPDSGWFMYPPLASTLGSPGI 157
Query: 190 SVDLAIFSLHLAGISSIIGA 249
+ D + + IS+I A
Sbjct: 158 NSDFWLLGITFVEISAIAAA 177
Score = 35.9 bits (79), Expect = 1.0
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +2
Query: 632 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 727
HH+FT GI A F++A+ ++AVPT +++F
Sbjct: 305 HHMFTTGIPHMGLALFSAASTLVAVPTAVQLF 336
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 50.0 bits (114), Expect = 6e-05
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = +2
Query: 656 DIDTRAYFTSATIIIAVPTGIKIF 727
D+DTRAYFTSAT+IIAVPTGIKIF
Sbjct: 1 DVDTRAYFTSATMIIAVPTGIKIF 24
>UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1;
Bucephalid sp. KH-2004|Rep: Cytochrome c oxidase subunit
I - Bucephalid sp. KH-2004
Length = 121
Score = 50.0 bits (114), Expect = 6e-05
Identities = 20/36 (55%), Positives = 27/36 (75%)
Frame = +2
Query: 620 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 727
+V HH+F VG D+ T +F+S T+II VPTGIK+F
Sbjct: 26 VVWLHHMFMVGFDVKTAVFFSSVTMIIGVPTGIKVF 61
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 49.6 bits (113), Expect = 8e-05
Identities = 28/73 (38%), Positives = 37/73 (50%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
P FGI S IIS K F F+V HH FT+G + +F+ +
Sbjct: 288 PSFGIFSEIISYIC-VKSVFSYISLIYATISITVLSFLVWLHHFFTMGSGYLSNIFFSIS 346
Query: 689 TIIIAVPTGIKIF 727
T+IIA+PTG+KIF
Sbjct: 347 TMIIAIPTGVKIF 359
Score = 46.0 bits (104), Expect = 0.001
Identities = 26/82 (31%), Positives = 40/82 (48%)
Frame = +1
Query: 4 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 183
N ++PL +G+ D+AFP +N + F I+ A TG YPPLS
Sbjct: 119 NIIIPLQIGSKDVAFPSLNLLSFWLTFFSVLLINISLIIGEFAKTGWLGYPPLSEKTFSP 178
Query: 184 GRSVDLAIFSLHLAGISSIIGA 249
VD +S+ ++GI +II +
Sbjct: 179 WVGVDYWNWSIQISGIGTIISS 200
Score = 41.5 bits (93), Expect = 0.021
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +3
Query: 390 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 506
+ DR L+T F+ GG +LY +L +GHPEVYILI
Sbjct: 248 IFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYILI 286
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 49.2 bits (112), Expect = 1e-04
Identities = 24/73 (32%), Positives = 35/73 (47%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
P FG+ S + S GK+ F F V HH FT+G +F A
Sbjct: 293 PAFGVFSEVTSTFAGKR-LFGHHSMIYASGAIAVLGFAVWLHHFFTMGAGASVNTFFGLA 351
Query: 689 TIIIAVPTGIKIF 727
T++I++PTG+K+F
Sbjct: 352 TMLISIPTGVKLF 364
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +3
Query: 378 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 506
A+ +L DR L+ F GG+P++Y +LF +GHPEVYILI
Sbjct: 249 ALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILI 291
Score = 45.2 bits (102), Expect = 0.002
Identities = 27/80 (33%), Positives = 39/80 (48%)
Frame = +1
Query: 4 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 183
N VPL +GA D+AFP +N++ F V A TG YPPL+
Sbjct: 124 NLAVPLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLAGIQYSP 183
Query: 184 GRSVDLAIFSLHLAGISSII 243
G VD I++L L+G+ + +
Sbjct: 184 GVGVDYYIWALQLSGLGTTL 203
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 48.8 bits (111), Expect = 1e-04
Identities = 27/58 (46%), Positives = 33/58 (56%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 174
GN L+PL+LGA D+AF R+NNI F +VE GAGTG TV SS +
Sbjct: 85 GNYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVKKICSSKM 142
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 48.4 bits (110), Expect = 2e-04
Identities = 17/30 (56%), Positives = 27/30 (90%)
Frame = +2
Query: 638 IFTVGIDIDTRAYFTSATIIIAVPTGIKIF 727
++T G+++DTRA+FTS TI+I++PTG K+F
Sbjct: 1 MYTTGLEVDTRAFFTSTTILISIPTGTKVF 30
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 48.0 bits (109), Expect = 2e-04
Identities = 32/82 (39%), Positives = 40/82 (48%), Gaps = 11/82 (13%)
Frame = +3
Query: 294 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG-----------G 440
S ++P+ A IT+ A +L DR TSFF P+G G
Sbjct: 214 SLMRMPICTWAWFITSCIALLAFAVLLPACILLCLDRVAGTSFFIPSGLVFNDHVIPHGG 273
Query: 441 GDPILYQHLF*FFGHPEVYILI 506
G +L+QHLF FFGHPEVYI I
Sbjct: 274 GSALLWQHLFWFFGHPEVYIAI 295
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/50 (44%), Positives = 30/50 (60%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 150
GN VP+++G+PD+AFPR+NNI F +VE G G+G TV
Sbjct: 83 GNWFVPILIGSPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGCGSGWTV 132
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +2
Query: 320 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 472
M C +YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = +2
Query: 659 IDTRAYFTSATIIIAVPTGIKIF 727
+DTRAYFTSAT+IIAVPTGIKIF
Sbjct: 2 VDTRAYFTSATMIIAVPTGIKIF 24
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 47.2 bits (107), Expect = 4e-04
Identities = 23/50 (46%), Positives = 31/50 (62%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 150
GN L+PL++GA D++F R+NNI F +VE+GAGTG TV
Sbjct: 80 GNYLLPLMIGASDMSFARLNNISFWLLPPALVCLVTSTLVESGAGTGWTV 129
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 46.4 bits (105), Expect = 7e-04
Identities = 20/68 (29%), Positives = 34/68 (50%)
Frame = +3
Query: 303 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 482
++P+F ++ T+ A + + L S F+P GG P+LYQ F F+
Sbjct: 198 KMPVFAWSIFATSILQLLTLGGLTAAALLTYLEIKLGLSMFNPGIGGVPVLYQQFFWFYS 257
Query: 483 HPEVYILI 506
HP VY+++
Sbjct: 258 HPAVYVML 265
Score = 41.1 bits (92), Expect = 0.027
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +2
Query: 620 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 727
IV HH+F VGI + F +T+I+AVPTG+KIF
Sbjct: 303 IVWLHHMFAVGIPEAWQIAFMISTLIVAVPTGVKIF 338
Score = 33.1 bits (72), Expect = 7.3
Identities = 23/83 (27%), Positives = 35/83 (42%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAH 180
GN +PL LG D+A PR+N G T Y PL+ +
Sbjct: 99 GNYFLPLQLGVRDVALPRLNTFAVWLFIASLILVVLGLFNGGAPSVGWTFYYPLTMDGNQ 158
Query: 181 RGRSVDLAIFSLHLAGISSIIGA 249
G SV + ++ L G+ S++G+
Sbjct: 159 TGVSVFMV--AVILNGLGSLLGS 179
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 46.0 bits (104), Expect = 0.001
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +2
Query: 461 TFILIFWTS*SLYFN-FPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHH 637
T + W +YF P FG IS II +K F + V HH
Sbjct: 295 TNLFWIWGHPEVYFVVLPAFGFISEIIPTF-AEKPLFGYATMVIATFAIGGISWGVWLHH 353
Query: 638 IFTVGIDIDTRAYFTSATIIIAVPTGIKIF 727
FT+G +F++AT+++ +PTG+K+F
Sbjct: 354 FFTMGAGPGINIFFSTATMLVGIPTGVKVF 383
Score = 44.4 bits (100), Expect = 0.003
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = +3
Query: 378 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 506
A+ +L DR L T FF GG+ +LY +LF +GHPEVY ++
Sbjct: 268 ALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVV 310
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 45.6 bits (103), Expect = 0.001
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 11/82 (13%)
Frame = +3
Query: 294 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG-----------G 440
+F +LP+ + + ITA + + DR T FF P+G G
Sbjct: 218 TFFRLPMTIWGLFITAILQAFALPVLTAGGFMQVADRLFGTCFFYPSGLVINNAAPTVGG 277
Query: 441 GDPILYQHLF*FFGHPEVYILI 506
G P+L+QHLF F+ HP VYI++
Sbjct: 278 GQPLLWQHLFWFYSHPAVYIML 299
Score = 37.9 bits (84), Expect = 0.26
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Frame = +1
Query: 1 GN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP---PLSSN 171
GN L+PL++GA D+AFP++N + + G G T YP L+
Sbjct: 117 GNFLIPLMIGADDMAFPKLNMLSYWFMWPAIACFGMSFKYAGGPAAGWTSYPVLADLAQA 176
Query: 172 IAHRGRSVDLAIFSLHLAGISSIIGA 249
G + + + G SS++G+
Sbjct: 177 APGSGTAQTYWLLGVTFVGFSSMMGS 202
Score = 34.7 bits (76), Expect = 2.4
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +2
Query: 617 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 727
FIV HH+FT G++ F +T++IA+P+ IK F
Sbjct: 336 FIVWGHHMFTSGMNPAVGMAFMVSTMMIALPSAIKTF 372
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 45.6 bits (103), Expect = 0.001
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 11/82 (13%)
Frame = +3
Query: 306 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-----------DPAGGGDPI 452
+P+F ++ +T + A+ IL +D L T++F D G +
Sbjct: 192 IPIFSLSINLTVWMMLFAFAALLAALMILASDHILGTTYFQYSIDGTTMATDADNPGASL 251
Query: 453 LYQHLF*FFGHPEVYILIFQDL 518
L+ HLF FFGHPEVYI+ F L
Sbjct: 252 LWAHLFWFFGHPEVYIVFFPAL 273
Score = 33.5 bits (73), Expect = 5.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 617 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 727
F+V HH+F GI++ + F + TI I++P + +F
Sbjct: 306 FVVWMHHMFLTGINLPIKTIFMATTIGISLPFDLMVF 342
Score = 33.1 bits (72), Expect = 7.3
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +1
Query: 4 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSS 168
N LVPL +GA D+AFPR+N + + G T+Y PL++
Sbjct: 89 NYLVPLQIGADDLAFPRLNALSYWLYLFSGILMGVSFFQGTTFAGGWTMYAPLNT 143
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/25 (80%), Positives = 23/25 (92%)
Frame = +2
Query: 653 IDIDTRAYFTSATIIIAVPTGIKIF 727
+ + TRAYFTSAT+IIAVPTGIKIF
Sbjct: 1 LTLHTRAYFTSATMIIAVPTGIKIF 25
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 44.4 bits (100), Expect = 0.003
Identities = 25/73 (34%), Positives = 34/73 (46%)
Frame = +2
Query: 509 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 688
P FG+ S I S GK F F+V HH FT+G A F A
Sbjct: 313 PAFGVYSEIFSTFSGKV-LFGYKSLVWATISIAFLSFLVWLHHFFTMGQSGHINAVFGIA 371
Query: 689 TIIIAVPTGIKIF 727
+++I +PTG+KI+
Sbjct: 372 SMLIGIPTGVKIY 384
Score = 42.3 bits (95), Expect = 0.012
Identities = 26/80 (32%), Positives = 39/80 (48%)
Frame = +1
Query: 4 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 183
N +VPL +GA D+AFP +N+I +V + G YPP + + +
Sbjct: 144 NYVVPLQIGARDVAFPILNSISLWLTAAGAALVMISLVVGAFSTGGWFGYPPYTETLYNP 203
Query: 184 GRSVDLAIFSLHLAGISSII 243
G VD I+SL LA + S +
Sbjct: 204 GIGVDYWIWSLTLASLGSTL 223
Score = 40.7 bits (91), Expect = 0.036
Identities = 24/67 (35%), Positives = 31/67 (46%)
Frame = +3
Query: 306 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 485
+PLF TA L DR L+ FF GG+ + + ++F FGH
Sbjct: 245 MPLFTWTALCTAIMMIFAMPPLTVVTLQLALDRYLDFHFFTNGLGGNQMNFLNMFWLFGH 304
Query: 486 PEVYILI 506
PEVYILI
Sbjct: 305 PEVYILI 311
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 43.6 bits (98), Expect = 0.005
Identities = 24/67 (35%), Positives = 37/67 (55%)
Frame = +3
Query: 306 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 485
LPLFV AV A G +LL ++ S++ GG +++++LF +FGH
Sbjct: 211 LPLFVWAVFWVAAISWFVFPEITGLFFLLLVGNLMHASYYISNYGG-ALMWENLFWYFGH 269
Query: 486 PEVYILI 506
PEVY+L+
Sbjct: 270 PEVYLLL 276
Score = 37.9 bits (84), Expect = 0.26
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +1
Query: 10 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLSSNIAHRG 186
L+PL +G+ D+ +PR+N + + + G TG TVY PLSS
Sbjct: 111 LIPLAIGSRDMIYPRMNALGYWLFLFSGIMLWSGFFLPGGNLDTGWTVYEPLSSFKFTPY 170
Query: 187 RSVDLAIFSLHLAGISSIIGA 249
D A ++ L GI +II +
Sbjct: 171 LGADTAAAAVVLRGIGTIIAS 191
>UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1;
Clonorchis sinensis|Rep: Cytochrome oxidase subunit 1 -
Clonorchis sinensis
Length = 120
Score = 39.1 bits (87), Expect = 0.11
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = -3
Query: 732 HLKILIPVGTAIIIVAEVKYARVSISIPTVNI**AQT 622
H K LIPVGT +I+V E+K V S PTVN+ AQT
Sbjct: 58 HEKTLIPVGTPMIMVTELKKTAVPKSSPTVNMWWAQT 94
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 39.1 bits (87), Expect = 0.11
Identities = 23/57 (40%), Positives = 27/57 (47%)
Frame = +3
Query: 48 PTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTT 218
P NK +KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 79 PPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPT 135
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 35.1 bits (77), Expect = 1.8
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +3
Query: 294 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 416
+ D++ L ++ ITA AGAIT+LLTDRN+NT
Sbjct: 161 TMDKISLLSWSILITAVLLLLSLPVLAGAITMLLTDRNMNT 201
>UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra
lucunter|Rep: Cytochrome oxidase I - Echinometra
lucunter
Length = 199
Score = 33.5 bits (73), Expect = 5.5
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1
Query: 514 IWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIYCLSSSYIH 645
IW +F+ T FW+ N L + SNW I C+S ++H
Sbjct: 19 IWNDFARNRTLFSNASTFWVPGNGLRHDSNWSPSIPCMSPPHVH 62
>UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3;
n=1; Candida albicans|Rep: Putative uncharacterized
protein CLN3 - Candida albicans (Yeast)
Length = 785
Score = 32.7 bits (71), Expect = 9.6
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = -2
Query: 457 YKIGSPPPAGSKNDVFKFRSVNN---IVIAPAKTGSDNNNKNAVIPTAH 320
Y++ +PP + +KN K S NN IA T ++NNN N+ +P H
Sbjct: 572 YQMVTPPNSANKNSN-KSNSANNNNTTTIATTTTTTNNNNNNSQLPAPH 619
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 538,165,312
Number of Sequences: 1657284
Number of extensions: 9840433
Number of successful extensions: 22440
Number of sequences better than 10.0: 115
Number of HSP's better than 10.0 without gapping: 20815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22277
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59677054775
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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