Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0139
(699 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. 23 1.8
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 23 2.4
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 23 2.4
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 23 3.2
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 22 4.2
AY337337-2|AAP94193.1| 491|Tribolium castaneum cytochrome P450 ... 22 5.5
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 7.3
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 7.3
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 7.3
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 7.3
AF251548-1|AAF70178.1| 491|Tribolium castaneum cytochrome P450 ... 21 7.3
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 21 9.7
>U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein.
Length = 470
Score = 23.4 bits (48), Expect = 1.8
Identities = 11/34 (32%), Positives = 14/34 (41%)
Frame = -2
Query: 200 LSSAVHIRRTPSARTVESRQRSLSSYPNRRYGSW 99
LSS H PS R + R +Y + SW
Sbjct: 286 LSSIRHPESNPSERVMRELGRIFRAYCRENHASW 319
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 23.0 bits (47), Expect = 2.4
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 583 LMTAALCSTARNMDLSTLGGRFRLRS 660
L T S ++ D+S+ RFRLRS
Sbjct: 40 LKTTQSVSVTKDQDVSSSVNRFRLRS 65
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 23.0 bits (47), Expect = 2.4
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = -1
Query: 183 YSSDTKCTHSGKSSTVALFLPKSKIRILGS 94
Y+ D CTH +++ P+S +GS
Sbjct: 365 YNQDVSCTHYQNPEYISVVNPESPYPQIGS 394
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 22.6 bits (46), Expect = 3.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 613 RNMDLSTLGGRFRLRSSMYNLINTFYS*K 699
+N D+ T + + M +INTFYS K
Sbjct: 6 QNGDVETFAFQAEIAQLMSLIINTFYSNK 34
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 22.2 bits (45), Expect = 4.2
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3
Query: 175 GHQVHAQWKVVN 140
GH +HAQ VVN
Sbjct: 327 GHHIHAQHHVVN 338
>AY337337-2|AAP94193.1| 491|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 491
Score = 21.8 bits (44), Expect = 5.5
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -2
Query: 182 IRRTPSARTVESRQRSLSSYP 120
I RTP + R+R L YP
Sbjct: 48 IMRTPEQMFLADRERGLKYYP 68
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.3
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +2
Query: 440 GGRHRSSRLCAVPSSSSP 493
G RSSR+C SS P
Sbjct: 145 GSLFRSSRMCFFKSSKKP 162
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.3
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +2
Query: 440 GGRHRSSRLCAVPSSSSP 493
G RSSR+C SS P
Sbjct: 145 GSLFRSSRMCFFKSSKKP 162
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.3
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +2
Query: 440 GGRHRSSRLCAVPSSSSP 493
G RSSR+C SS P
Sbjct: 145 GSLFRSSRMCFFKSSKKP 162
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.3
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +2
Query: 440 GGRHRSSRLCAVPSSSSP 493
G RSSR+C SS P
Sbjct: 145 GSLFRSSRMCFFKSSKKP 162
>AF251548-1|AAF70178.1| 491|Tribolium castaneum cytochrome P450
monooxigenase CYP4Q4 protein.
Length = 491
Score = 21.4 bits (43), Expect = 7.3
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -2
Query: 182 IRRTPSARTVESRQRSLSSYP 120
I RTP + R+R L YP
Sbjct: 48 IMRTPEQLFLAERERGLKYYP 68
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 21.0 bits (42), Expect = 9.7
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +3
Query: 582 ANDGCIVQYRPEHGPLDAW 638
A +G I Y+ +GP D W
Sbjct: 1128 AANGVIKGYKVIYGPSDTW 1146
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,095
Number of Sequences: 336
Number of extensions: 4091
Number of successful extensions: 17
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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