Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0138
(524 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485... 33 0.14
08_02_0707 - 20212190-20214592 33 0.19
03_04_0023 + 16537257-16537272,16537515-16537929,16538404-165384... 32 0.25
05_01_0141 - 937428-937717,938483-938705 32 0.32
12_02_0306 + 17307166-17309091 31 0.57
08_02_1202 - 25253175-25253340,25255573-25255681,25256021-252561... 30 0.99
12_01_0752 - 6798938-6799312,6799628-6799768,6800257-6800325,680... 30 1.3
06_02_0125 + 12122812-12122911,12123647-12123993 30 1.3
06_02_0124 + 12116278-12116374,12116595-12116881 30 1.3
05_01_0214 - 1615519-1616775 30 1.3
12_02_0329 + 17585046-17585561 29 1.7
06_03_1075 + 27399279-27399376,27399449-27399555,27400791-274008... 29 2.3
08_02_0965 + 23078568-23079430,23079527-23079755,23079854-23080018 29 3.0
06_02_0122 - 12095385-12095713,12096018-12096120 28 4.0
05_01_0142 - 940421-940701,941262-941574 28 4.0
10_07_0063 - 12502305-12503361,12503567-12503668,12504251-125043... 28 5.3
09_06_0016 - 20240358-20240797,20241040-20241131,20241132-202412... 28 5.3
03_06_0656 - 35330109-35331011,35331154-35331360,35331455-353316... 28 5.3
10_08_0956 + 21796707-21797497,21799603-21799861,21799969-21800142 27 7.0
08_01_0498 - 4327502-4328395 27 7.0
01_01_0459 + 3400288-3400729,3400760-3400806,3401055-3401141,340... 27 7.0
09_04_0367 - 16978069-16978085,16978514-16978611,16979069-169792... 27 9.2
08_01_0473 - 4169754-4169938,4170039-4170121,4170297-4170347,417... 27 9.2
07_03_1180 - 24601631-24602142,24602518-24602581,24602811-246028... 27 9.2
06_03_0500 + 21470681-21470952,21471049-21471089,21472322-214724... 27 9.2
>05_03_0235 -
10747649-10748118,10748226-10748314,10748477-10748574,
10748934-10749046,10749107-10749200,10749557-10749589,
10749734-10749851,10750110-10750210,10751036-10751233,
10751337-10751471,10751752-10751830,10753650-10753738,
10753835-10753987,10754100-10754285
Length = 651
Score = 33.1 bits (72), Expect = 0.14
Identities = 21/74 (28%), Positives = 29/74 (39%), Gaps = 4/74 (5%)
Frame = -2
Query: 271 WRGQPRH--GGHDGHVTDEHWARGHN--GRVSHDHGGHQGHVTNVHWARGHNGGVSHDHR 104
+R + RH G H H D GH+ H HGGH + H G HD +
Sbjct: 524 YRARRRHQKGRHHRHHHDHRHRHGHSHGDHHHHYHGGHHQRRRHHHPPAWDVEGHHHDRQ 583
Query: 103 GYTRSLGNNYRARY 62
++ G N+ Y
Sbjct: 584 QHSHEAGRNHHRGY 597
>08_02_0707 - 20212190-20214592
Length = 800
Score = 32.7 bits (71), Expect = 0.19
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Frame = -2
Query: 253 HGGHDGHVTDEHWARGHNGRVSHDH-GGHQGHVTNVHWARG--HNGGVSHDHRGYTRSLG 83
HGG H + H+ SH H GH+ H + H +G HNG H +S
Sbjct: 492 HGGSCSHSHSHSHSHSHSHSHSHSHVHGHEDHHNHDHALQGVNHNGACCEHHGDANKS-- 549
Query: 82 NNYRARYYDGRISNDHGRNSRLFFN 8
++ ++D SN+ ++ L N
Sbjct: 550 -HHHDHHHDS--SNEESHHNSLTEN 571
>03_04_0023 +
16537257-16537272,16537515-16537929,16538404-16538466,
16538604-16538607
Length = 165
Score = 32.3 bits (70), Expect = 0.25
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -2
Query: 280 GPQWRGQPRHGGHDGHVTDEHWARGHNGRVSHDHGGHQG 164
G Q RG P+ H GH ++ GH H+H H G
Sbjct: 17 GGQQRGTPQQHLHAGHAQEQPPGHGHGQVQRHEHPAHGG 55
>05_01_0141 - 937428-937717,938483-938705
Length = 170
Score = 31.9 bits (69), Expect = 0.32
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = -2
Query: 196 RVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRISNDHGRNSRL 17
++SH HG H G+ GH+GG+ H G+ L + + G HG + L
Sbjct: 100 KLSHGHG-HGGYGYG-----GHHGGLFGGHHGHHGGLFGGHHGHHGGGLFGGHHGHHGGL 153
Query: 16 F 14
F
Sbjct: 154 F 154
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -2
Query: 238 GHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGY 98
GH + GH+G + H GH G + H H GG+ H G+
Sbjct: 104 GHGHGGYGYGGHHGGLFGGHHGHHGGLFGGHHGH-HGGGLFGGHHGH 149
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = -2
Query: 253 HGGHDGHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGY 98
H GH G + H H G + H GH G + H H G H H G+
Sbjct: 123 HHGHHGGLFGGHHGH-HGGGLFGGHHGHHGGLFGGH----HGFGGHHGHHGH 169
>12_02_0306 + 17307166-17309091
Length = 641
Score = 31.1 bits (67), Expect = 0.57
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = -3
Query: 144 GLGATMAGSATITGATLGPSATITGLGTMMAGSAMITGETAGFSSTF 4
G+G T+ G GA +G S T G GT+ G A G G TF
Sbjct: 473 GVGVTLVGVGAWAGADVGSSLTEGGGGTLCGGDAR-GGARDGVGETF 518
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -3
Query: 144 GLGATMAGSATITGATLGPSATITGLGTMMAGSA 43
G+G T+ G GA +G S T G GT+ G A
Sbjct: 206 GVGVTLVGVGAGAGADVGSSLTGGGDGTLCGGGA 239
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -3
Query: 144 GLGATMAGSATITGATLGPSATITGLGTMMAGSA 43
G+G T+ G GA +G S T G GT+ G A
Sbjct: 357 GVGVTLVGVGAGAGADVGSSLTGGGDGTLCGGGA 390
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -3
Query: 144 GLGATMAGSATITGATLGPSATITGLGTMMAGSA 43
G+G T+ G GA +G S T G GT+ G A
Sbjct: 95 GVGVTVTGVGAGAGAGVGSSLTGDGGGTLCGGGA 128
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -3
Query: 144 GLGATMAGSATITGATLGPSATITGLGTMMAGSA 43
G+G T+ G GA +G S T G GT+ G A
Sbjct: 397 GVGVTVTGVGAGAGAGVGSSLTGDGGGTLCGGGA 430
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -3
Query: 144 GLGATMAGSATITGATLGPSATITGLGTMMAGSA 43
G+G T G GA +G S T G GT+ G A
Sbjct: 513 GVGETFIGVGAGAGAGVGSSLTGDGGGTLCGGGA 546
>08_02_1202 -
25253175-25253340,25255573-25255681,25256021-25256123,
25256246-25256277,25257697-25258178,25258946-25259025,
25259107-25259165,25259341-25259413,25259526-25259660
Length = 412
Score = 30.3 bits (65), Expect = 0.99
Identities = 17/59 (28%), Positives = 23/59 (38%)
Frame = -2
Query: 262 QPRHGGHDGHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSL 86
+P GH V R + R HGG G HW ++ G + D R R+L
Sbjct: 178 EPYVAGHHLLVAHAEAVRLYRARYRAAHGGEVGITQVSHWFEPYDAGSAADRRARRRAL 236
>12_01_0752 -
6798938-6799312,6799628-6799768,6800257-6800325,
6800407-6800454,6801740-6801836,6801922-6802001,
6802099-6802170,6802335-6802429,6802853-6802934,
6805476-6805853
Length = 478
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = -2
Query: 286 G*GPQWRGQPRHGGHDGHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSH 113
G G + RG+ H ++ H ++++ HNG+ H+H H N H G+ GG H
Sbjct: 372 GRGGRGRGRGYHQHNNNHFNNQNY---HNGQ-HHNH-----HANNHHHQGGNRGGAHH 420
>06_02_0125 + 12122812-12122911,12123647-12123993
Length = 148
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/62 (29%), Positives = 24/62 (38%)
Frame = -2
Query: 247 GHDGHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRA 68
G G V D+ W H G + G G + + G+ GG + H GY G Y
Sbjct: 44 GRSG-VEDQKWGGAHGGGYGYGGGYGGGGYGHPGYGGGYGGG--YGHPGYGGGYGGGYGQ 100
Query: 67 RY 62
Y
Sbjct: 101 GY 102
>06_02_0124 + 12116278-12116374,12116595-12116881
Length = 127
Score = 29.9 bits (64), Expect = 1.3
Identities = 22/75 (29%), Positives = 28/75 (37%), Gaps = 8/75 (10%)
Frame = -2
Query: 232 VTDEHWARG-HNGRVSHDHGGHQGHVTNVHWARGHNGGVSHD-------HRGYTRSLGNN 77
V D+ W G H+G GG+ G + G+ GG H H GY G
Sbjct: 47 VEDQKWGGGYHHGGGYGYGGGYGGGYGRPAYGGGYGGGYGHPGYGGGYGHPGYGDGYGGG 106
Query: 76 YRARYYDGRISNDHG 32
Y + Y G HG
Sbjct: 107 YGSGYGGGYGHPGHG 121
>05_01_0214 - 1615519-1616775
Length = 418
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -2
Query: 253 HGGHDGHVTDEHWARGHNGRVSHDHGGHQGHVT-NVHWARGHNGGVSHDH 107
HGG D H H + H G V H GH +T N+H H+ G H H
Sbjct: 202 HGGSD-HDHHHHEDQEH-GHVHHHEDGHGNSITVNLH----HHPGTGHHH 245
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = -2
Query: 193 VSHDHGGHQGHVTNVHWARGH-NGGVSHDH 107
+ HDHG GH + H +GG HDH
Sbjct: 180 LGHDHGHGHGHGHGHGHSHDHDHGGSDHDH 209
>12_02_0329 + 17585046-17585561
Length = 171
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -2
Query: 253 HGGHDGHVTDEHW-ARGHNGRVSHDHGGHQGHVTNVHWARG 134
H G +G + W R HN R H HGG +G + W RG
Sbjct: 113 HPGPEGGRSAAAWLCRSHNHRC-HGHGGGKGGGGDGRWRRG 152
>06_03_1075 +
27399279-27399376,27399449-27399555,27400791-27400898,
27401763-27401860,27401983-27402033,27402137-27402228,
27402360-27402459,27402765-27402884,27402977-27403045,
27403299-27403345,27403428-27403483,27404760-27404800,
27405155-27405260,27406728-27406860,27406937-27407357
Length = 548
Score = 29.1 bits (62), Expect = 2.3
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = -2
Query: 265 GQPRHGGHDGHVTDEHWARGHNGRVSHDHGGHQGHVT-NVHWARGHNGGVSHDHRGYTRS 89
G P G D ++ E N + + G+Q H N + G HD RGY++
Sbjct: 443 GLPPRGDRD-RISRERTHIDENDKEGNRDRGNQKHEDYNRYCKPGERSSSRHDDRGYSK- 500
Query: 88 LGNNYRARYYDGRISNDHGRNS 23
+ R++Y DG +D+ R S
Sbjct: 501 --HESRSKYRDG--DDDYRRQS 518
>08_02_0965 + 23078568-23079430,23079527-23079755,23079854-23080018
Length = 418
Score = 28.7 bits (61), Expect = 3.0
Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 5/79 (6%)
Frame = -2
Query: 274 QWRGQPRHGGHDGHVTDEHWARGHNGRVSHDHGGHQGH-----VTNVHWARGHNGGVSHD 110
++ G G +DGH E WARG R + G GH + +A G SH
Sbjct: 200 KYEGDWVDGKYDGHGV-ESWARGSRYRGQYRQGLRHGHGVYRFYSGDCYAGEWAAGQSHG 258
Query: 109 HRGYTRSLGNNYRARYYDG 53
T S G++Y + G
Sbjct: 259 IGAQTCSDGSSYAGEFKGG 277
Score = 28.3 bits (60), Expect = 4.0
Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 4/82 (4%)
Frame = -2
Query: 280 GPQWRGQPRHGGHDGHVTDEHWARG-HNGR--VSHDHG-GHQGHVTNVHWARGHNGGVSH 113
G ++RGQ R G GH ++ + G HG G Q +A GGV H
Sbjct: 221 GSRYRGQYRQGLRHGHGVYRFYSGDCYAGEWAAGQSHGIGAQTCSDGSSYAGEFKGGVKH 280
Query: 112 DHRGYTRSLGNNYRARYYDGRI 47
Y G+ Y Y+ RI
Sbjct: 281 GLGCYHFRNGDRYSGEYFADRI 302
>06_02_0122 - 12095385-12095713,12096018-12096120
Length = 143
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/67 (28%), Positives = 25/67 (37%), Gaps = 1/67 (1%)
Frame = -2
Query: 250 GGHDGHVTDEHWARGHNGRVSHD-HGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNY 74
GG+ G + G+ G H +GG G + RG+ GG GY G Y
Sbjct: 68 GGYGGEYGRPGYGGGYGGGYGHPGYGGGYGG----GYGRGYGGGYGGSGGGYGGGYGGGY 123
Query: 73 RARYYDG 53
Y G
Sbjct: 124 GGGYGGG 130
>05_01_0142 - 940421-940701,941262-941574
Length = 197
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = -2
Query: 265 GQPRHGGHDGHVTDEHWARGHNG-RVSHDHGGHQGHVTNVHWARGHNGG 122
G +GGH G H GH+G + H GH G + G GG
Sbjct: 142 GHMGYGGHGGFGGYGHGYGGHHGGKFKHGKHGHHGKFKHGKHGHGMFGG 190
>10_07_0063 -
12502305-12503361,12503567-12503668,12504251-12504378,
12504653-12504764,12504876-12504927,12505260-12505517,
12505943-12506079,12506296-12506606
Length = 718
Score = 27.9 bits (59), Expect = 5.3
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = -2
Query: 271 WRGQPRHGGHDGHVTDEHWARGHNGRVSHDHGGHQ-GHVTNVHWARGHNGGVSHDHRGYT 95
W Q H + H ++ GH ++S D HQ H N H +G NG HD + +
Sbjct: 630 WEDQSYHHQQNHH--QNYY--GHR-QMSQDQYHHQQNHHQNYHGRQGMNGNQYHDRQNHN 684
Query: 94 RS 89
++
Sbjct: 685 QN 686
>09_06_0016 -
20240358-20240797,20241040-20241131,20241132-20241250,
20241398-20241561,20241664-20241757,20242048-20242080,
20242361-20242478,20242712-20242812,20242882-20242962,
20243138-20243335,20243411-20243545,20243662-20243667,
20243727-20243805,20243845-20243896,20244328-20244388,
20244475-20244532,20245137-20245225,20246305-20246799
Length = 804
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -2
Query: 211 RGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHD 110
R H+ R SH H H+ H T + R H+ HD
Sbjct: 694 RAHSHRHSHHHDAHKRHKTELAGHRRHHVLHIHD 727
>03_06_0656 -
35330109-35331011,35331154-35331360,35331455-35331632,
35331726-35332221,35332889-35333033
Length = 642
Score = 27.9 bits (59), Expect = 5.3
Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Frame = -2
Query: 286 G*GP-QWRGQPRHGGHDGHVTDEHW-ARGHNG----RVSHDHGGHQGHVTNVHWARGHNG 125
G GP + G R D H + H ARG+ G R +GG+QG + RG+NG
Sbjct: 380 GGGPGRGNGGFRQNSRD-HSAEPHGNARGNGGYQERRDIGYNGGYQGRGNGGYQQRGYNG 438
Query: 124 GVS--HDHRGYTRSLGNNYRARYYDGRISN 41
+ + RGY GNN R+ R N
Sbjct: 439 NNNGGYQQRGYN---GNN-NGRFQQERAVN 464
>10_08_0956 + 21796707-21797497,21799603-21799861,21799969-21800142
Length = 407
Score = 27.5 bits (58), Expect = 7.0
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 5/79 (6%)
Frame = -2
Query: 274 QWRGQPRHGGHDGHVTDEHWARGHNGRVSHDHGGHQGH-----VTNVHWARGHNGGVSHD 110
++ G G +DG+ E WARG R + G GH T +A + G SH
Sbjct: 176 RYEGDWIDGKYDGYGV-ETWARGSRYRGQYRQGLRHGHGVYRFYTGDVYAGEWSNGQSHG 234
Query: 109 HRGYTRSLGNNYRARYYDG 53
+ +T G+ Y + G
Sbjct: 235 YGVHTCEDGSRYIGEFKRG 253
>08_01_0498 - 4327502-4328395
Length = 297
Score = 27.5 bits (58), Expect = 7.0
Identities = 18/56 (32%), Positives = 23/56 (41%)
Frame = -2
Query: 250 GGHDGHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLG 83
GG G H G G GG G V + H+ GG+SH H G+ + G
Sbjct: 157 GGAGGAAAARH---GEGGCCGGGGGGADGVVIDGHYPLA--GGLSHSHHGHQQQDG 207
>01_01_0459 +
3400288-3400729,3400760-3400806,3401055-3401141,
3401230-3401561,3401648-3401807,3402155-3402223,
3403165-3403263
Length = 411
Score = 27.5 bits (58), Expect = 7.0
Identities = 25/85 (29%), Positives = 36/85 (42%)
Frame = -2
Query: 280 GPQWRGQPRHGGHDGHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 101
GP+ RG PR G + H R + R +H HGG G G GG + + R
Sbjct: 100 GPERRGAPRARVLGGGMYAAH--RHRHERGAHAHGGGGG---------GGGGGGAKERRA 148
Query: 100 YTRSLGNNYRARYYDGRISNDHGRN 26
+GN + ++S+ HG N
Sbjct: 149 AAVLVGNACHGLFPQKKVSS-HGFN 172
>09_04_0367 -
16978069-16978085,16978514-16978611,16979069-16979229,
16979320-16979548,16979731-16980593
Length = 455
Score = 27.1 bits (57), Expect = 9.2
Identities = 27/94 (28%), Positives = 38/94 (40%), Gaps = 5/94 (5%)
Frame = -2
Query: 274 QWRGQPRHGGHDGHVTDEHWARGHNGRVSHDHGGHQGH-----VTNVHWARGHNGGVSHD 110
++ G G +DG+ E WARG R + G GH + +A GG SH
Sbjct: 200 KYEGDWVDGKYDGYGI-ESWARGSRYRGQYRQGLRHGHGVYRFYSGDCYAGEWAGGQSHG 258
Query: 109 HRGYTRSLGNNYRARYYDGRISNDHGRNSRLFFN 8
T S G++Y + + HG S F N
Sbjct: 259 IGAQTCSDGSSYVGEF---KCGVKHGLGSYHFRN 289
>08_01_0473 -
4169754-4169938,4170039-4170121,4170297-4170347,
4170434-4170507,4170585-4170679,4171672-4171754,
4171848-4172104
Length = 275
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 274 QWRGQPRHGGHDGHVTDEHWARGHN 200
Q G+ R G H +VT+E+ AR H+
Sbjct: 103 QVEGRKRKGKHGSYVTEENAARAHD 127
>07_03_1180 -
24601631-24602142,24602518-24602581,24602811-24602876,
24602949-24603070,24603170-24603344,24603466-24603701,
24603781-24604129,24605009-24605146,24605242-24605289
Length = 569
Score = 27.1 bits (57), Expect = 9.2
Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 8/97 (8%)
Frame = -2
Query: 286 G*GPQWRGQPRHGGHDGHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARG---HNGGVS 116
G GPQ G ++G G+ + + NG H +G N + G + G
Sbjct: 465 GRGPQGNGYHQNGNGGGYHQNGNGYH-QNGDGYHQNGNRYNQNGNRYHQNGDEYYQNGNG 523
Query: 115 HDHR----GYTRSLGNNYRA-RYYDGRISNDHGRNSR 20
+ HR GY GN YR R + N +GR +R
Sbjct: 524 NGHRQNGSGYYHQNGNGYRQDRIFHN--GNGNGRPAR 558
>06_03_0500 +
21470681-21470952,21471049-21471089,21472322-21472485,
21472577-21472679,21472806-21472975,21473766-21474239
Length = 407
Score = 27.1 bits (57), Expect = 9.2
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Frame = -2
Query: 202 NGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYR---ARYYDGRISNDHG 32
NGR H HG GH ++ + G N G S GY G YR A YY +G
Sbjct: 269 NGR--HSHGSGGGHRSSYRGSGGGNSG-SSSSGGY-GGYGGGYRSAAAAYYGSTGYAGYG 324
Query: 31 R 29
R
Sbjct: 325 R 325
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,756,045
Number of Sequences: 37544
Number of extensions: 198870
Number of successful extensions: 802
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1154538620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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