Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0138
(524 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38992| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.082
SB_7383| Best HMM Match : SapA (HMM E-Value=1.2e-13) 33 0.14
SB_34021| Best HMM Match : Zip (HMM E-Value=0) 33 0.19
SB_25797| Best HMM Match : Extensin_2 (HMM E-Value=0.55) 32 0.25
SB_54180| Best HMM Match : Mfp-3 (HMM E-Value=1.9) 31 0.77
SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042) 31 0.77
SB_32399| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_17220| Best HMM Match : Prothymosin (HMM E-Value=4.9) 30 1.3
SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_58446| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_56781| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_53470| Best HMM Match : E-MAP-115 (HMM E-Value=7.6) 29 2.3
SB_32451| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_15566| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05) 29 3.1
SB_53527| Best HMM Match : zf-C3HC4 (HMM E-Value=3.3e-12) 29 3.1
SB_40869| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_31213| Best HMM Match : SNF2_N (HMM E-Value=0) 28 4.1
SB_15859| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_51218| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_13265| Best HMM Match : IncA (HMM E-Value=0.32) 28 5.4
SB_37199| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_25884| Best HMM Match : Prothymosin (HMM E-Value=6.3) 28 5.4
SB_25763| Best HMM Match : MgtE_N (HMM E-Value=1.9) 28 5.4
SB_16487| Best HMM Match : ITAM (HMM E-Value=0.24) 28 5.4
SB_12271| Best HMM Match : DUF1079 (HMM E-Value=1.2) 28 5.4
SB_58969| Best HMM Match : Avidin (HMM E-Value=3.7) 27 7.2
SB_13470| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_9681| Best HMM Match : IncA (HMM E-Value=0.58) 27 7.2
SB_19891| Best HMM Match : Keratin (HMM E-Value=0.96) 27 7.2
SB_11794| Best HMM Match : TNFR_c6 (HMM E-Value=1.4e-05) 27 7.2
SB_42267| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=5.9e-12) 27 9.5
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_26478| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=7.6e-10) 27 9.5
SB_15720| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_5724| Best HMM Match : Vicilin_N (HMM E-Value=3) 27 9.5
SB_40325| Best HMM Match : Herpes_US9 (HMM E-Value=1.9) 27 9.5
SB_26341| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_24257| Best HMM Match : DUF583 (HMM E-Value=0.16) 27 9.5
>SB_38992| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 33.9 bits (74), Expect = 0.082
Identities = 29/86 (33%), Positives = 32/86 (37%), Gaps = 8/86 (9%)
Frame = -2
Query: 253 HGG----HDGHVTDEHWARGHNGRVSHDHGG---HQGHVTNVHWARGH-NGGVSHDHRGY 98
HGG H G D R +G DHGG G H G +GG DH G
Sbjct: 13 HGGTGRDHGGTRRDHGGTRRDHGGTGRDHGGTGRDHGGTGRDHGGTGRDHGGTGRDHGGT 72
Query: 97 TRSLGNNYRARYYDGRISNDHGRNSR 20
R G R +DG DHG R
Sbjct: 73 GRDHGGT--RRDHDG-TRRDHGGTRR 95
Score = 30.7 bits (66), Expect = 0.77
Identities = 23/69 (33%), Positives = 27/69 (39%), Gaps = 4/69 (5%)
Frame = -2
Query: 214 ARGHNGRVSHDHGG----HQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRI 47
+R +G DHGG H G + R +GG DH G R G R GR
Sbjct: 2 SRRDHGSTRRDHGGTGRDHGGTRRDHGGTRRDHGGTGRDHGGTGRDHGGTGRDHGGTGR- 60
Query: 46 SNDHGRNSR 20
DHG R
Sbjct: 61 --DHGGTGR 67
Score = 30.3 bits (65), Expect = 1.0
Identities = 24/73 (32%), Positives = 27/73 (36%), Gaps = 4/73 (5%)
Frame = -2
Query: 226 DEHWARGHNGRVSHDHGGHQ---GHVTNVHWARGHN-GGVSHDHRGYTRSLGNNYRARYY 59
D R +G DHGG + G H G + GG DH G R G R
Sbjct: 5 DHGSTRRDHGGTGRDHGGTRRDHGGTRRDHGGTGRDHGGTGRDHGGTGRDHGGTGRDHGG 64
Query: 58 DGRISNDHGRNSR 20
GR DHG R
Sbjct: 65 TGR---DHGGTGR 74
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 4/61 (6%)
Frame = -2
Query: 253 HGG----HDGHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSL 86
HGG HDG D R +G DHGG + + R +GG DH G R
Sbjct: 76 HGGTRRDHDGTRRDHGGTRRDHGGTRRDHGGTR---RDHGGTRRDHGGTRRDHDGTGRDH 132
Query: 85 G 83
G
Sbjct: 133 G 133
Score = 29.5 bits (63), Expect = 1.8
Identities = 26/78 (33%), Positives = 29/78 (37%), Gaps = 4/78 (5%)
Frame = -2
Query: 253 HGG----HDGHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSL 86
HGG H G D R +G DHGG R +GG DH G R
Sbjct: 69 HGGTGRDHGGTRRDHDGTRRDHGGTRRDHGG----------TRRDHGGTRRDHGGTRRDH 118
Query: 85 GNNYRARYYDGRISNDHG 32
G R +DG DHG
Sbjct: 119 GGT--RRDHDG-TGRDHG 133
>SB_7383| Best HMM Match : SapA (HMM E-Value=1.2e-13)
Length = 492
Score = 33.1 bits (72), Expect = 0.14
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = -2
Query: 253 HGGHDGHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNG-GVSHDH 107
HGG G+ D GH G H HG GH G G G H H
Sbjct: 131 HGGGPGYGGDYGGGLGHCGGPGHGHGPGHGHGHGAGLVHGDGGPGPGHGH 180
Score = 31.9 bits (69), Expect = 0.33
Identities = 23/74 (31%), Positives = 30/74 (40%)
Frame = -2
Query: 253 HGGHDGHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNY 74
+ G D D+ R H+ R H HGG G+ + GH GG H H G G+
Sbjct: 109 NSGGDVDCDDDCDGRSHSHR--HAHGGGPGYGGDYGGGLGHCGGPGHGH-GPGHGHGHGA 165
Query: 73 RARYYDGRISNDHG 32
+ DG HG
Sbjct: 166 GLVHGDGGPGPGHG 179
>SB_34021| Best HMM Match : Zip (HMM E-Value=0)
Length = 808
Score = 32.7 bits (71), Expect = 0.19
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = -2
Query: 253 HGGHDGHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYT 95
HG GH + H N SH++ GH H + H + H G SHD+ G++
Sbjct: 309 HGHSHGHSHENHGHSHENHGHSHENHGH-SHENHGHSHKHH--GHSHDNHGHS 358
Score = 32.3 bits (70), Expect = 0.25
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -2
Query: 253 HGGHDGHVTDEHWARGHNGRVSHDHGGHQ-GHVTNVHWARGHNGGVSHDH 107
H H GH + H N SH H GH + + H GH+ G SH+H
Sbjct: 324 HENH-GHSHENHGHSHENHGHSHKHHGHSHDNHGHSHENHGHSHGHSHEH 372
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -2
Query: 241 DGHVTD-EHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYT 95
D V D E A GH H H H GH H N G SH++ G++
Sbjct: 296 DNDVKDSESCADGHGHSHGHSHENH-GHSHENHGHSHENHGHSHENHGHS 344
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = -2
Query: 181 HGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRISNDHGRN 26
HG GH H N G SH++ G++ N+ + + G ++HG +
Sbjct: 309 HGHSHGHSHENHGHSHENHGHSHENHGHSHE--NHGHSHKHHGHSHDNHGHS 358
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Frame = -2
Query: 253 HGGHDGHVTDEHWARGHNGRVSHDHGGHQ----GHVTNVHWARGHNGGVSHDH 107
H H GH + H N SH++ GH GH + H N G SH H
Sbjct: 317 HENH-GHSHENHGHSHENHGHSHENHGHSHKHHGHSHDNHGHSHENHGHSHGH 368
>SB_25797| Best HMM Match : Extensin_2 (HMM E-Value=0.55)
Length = 910
Score = 32.3 bits (70), Expect = 0.25
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -2
Query: 181 HGGHQGHVTNVHWARGHNGGV-SHDHRGYTRSLGNNYR 71
+G HQGH+ N +GH G V +++H TRS G Y+
Sbjct: 777 YGAHQGHMCNGLPEKGHYGDVGAYEHAMDTRSPGYPYK 814
>SB_54180| Best HMM Match : Mfp-3 (HMM E-Value=1.9)
Length = 125
Score = 30.7 bits (66), Expect = 0.77
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2
Query: 247 GHDGHVTDEHWARGHNGRVSH-DHGGHQGHVTNVHWARGHNGGVSHDHRGYT 95
G+ G+ H H+ + H D+GGH H+ GH+ G+ HD+ G+T
Sbjct: 62 GYGGYHHGYHGYHDHDVHIHHHDYGGHD------HYDGGHHDGMHHDY-GHT 106
>SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042)
Length = 628
Score = 30.7 bits (66), Expect = 0.77
Identities = 19/63 (30%), Positives = 24/63 (38%)
Frame = -2
Query: 289 LG*GPQWRGQPRHGGHDGHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHD 110
+G GP G+ GG G W RG G + GG G + W R GG+
Sbjct: 1 MGQGPGGWGRGSGGGW-GQGPGGGWGRGQGGGMGRGPGGGWGRGSGGGWGRMQGGGMGRG 59
Query: 109 HRG 101
G
Sbjct: 60 PGG 62
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/63 (33%), Positives = 22/63 (34%), Gaps = 1/63 (1%)
Frame = -2
Query: 286 G*GPQW-RGQPRHGGHDGHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHD 110
G G W RGQ GG G W RG G GG G W R GG+
Sbjct: 19 GPGGGWGRGQ---GGGMGRGPGGGWGRGSGGGWGRMQGGGMGRGPGGGWGRMQGGGMGRG 75
Query: 109 HRG 101
G
Sbjct: 76 PGG 78
>SB_32399| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 30.3 bits (65), Expect = 1.0
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = -2
Query: 241 DGHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARGHN 128
+GHV+D+ W++ +G V++ GH ++ W+R +
Sbjct: 8 NGHVSDKGWSQARHGMVTNT--TQNGHGSDTEWSRARH 43
>SB_17220| Best HMM Match : Prothymosin (HMM E-Value=4.9)
Length = 256
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 5/50 (10%)
Frame = -2
Query: 241 DGHV---TDEHWARGHNGRVSHDHG--GHQGHVTNVHWARGHNGGVSHDH 107
DGH+ T EH GH +H+H GH T+ GH +H+H
Sbjct: 128 DGHMKTCTHEHSEDGHMKTCTHEHSEDGHMKTCTHEQSEDGHMRTCTHEH 177
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
Frame = -2
Query: 241 DGHV---TDEHWARGHNGRVSHDHG--GHQGHVTNVHWARGHNGGVSHD 110
DGH+ T EH GH SH+H GH T+ GH +H+
Sbjct: 24 DGHMKTCTHEHSEDGHMKTCSHEHSEDGHMKTCTHEPSENGHMKTCTHE 72
>SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/53 (35%), Positives = 23/53 (43%)
Frame = -2
Query: 250 GGHDGHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTR 92
G H++ RG G S H H G +T RG GGVS H G+ R
Sbjct: 1051 GASSAHISHGRLTRGDGGGASSAHISH-GRLT-----RGDGGGVSSAHIGHGR 1097
>SB_58446| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.5 bits (63), Expect = 1.8
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 10/80 (12%)
Frame = -2
Query: 244 HDGHVTDEH-WARGHNGRVSHDHGGHQGHVTNVH-WARG--------HNGGVSHDHRGYT 95
HDG + H W HNG++ H H G + H W G H+G + H +
Sbjct: 97 HDGKIQGFHAW---HNGKIQGFHTWHDGKIQGFHAWHDGKIQGFHAWHDGKIQGFHAWHV 153
Query: 94 RSLGNNYRARYYDGRISNDH 35
+ + A ++DG+I H
Sbjct: 154 GQI-QGFHA-WHDGKIQGFH 171
>SB_56781| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 147
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = -2
Query: 253 HGGHDGHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTR 92
HGG G+ +RG+ G GG +G+ G G++ RGYTR
Sbjct: 7 HGGTRGYTGG---SRGYTGGTRGYTGGTRGYTGGTRGYTGGTRGLTRGTRGYTR 57
>SB_53470| Best HMM Match : E-MAP-115 (HMM E-Value=7.6)
Length = 192
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/70 (27%), Positives = 27/70 (38%)
Frame = -2
Query: 244 HDGHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRAR 65
HD +EH R R D GH N H R H+ +++H NN
Sbjct: 39 HDEERNNEHEDRHDEERNDEDEDGHDEERNNEHEDR-HDEERNNEHEDRHDEERNNEEED 97
Query: 64 YYDGRISNDH 35
+D +N+H
Sbjct: 98 KHDEERNNEH 107
>SB_32451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 924
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 2/76 (2%)
Frame = -2
Query: 250 GGHDGHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYR 71
GG G+ + GH G + GGH+G + + +GG GY + G R
Sbjct: 767 GGGGGYRGGGGYGGGHRGGGGYGGGGHRGGSYSGYRGSYKSGGYGQGSGGYGQGSGGYNR 826
Query: 70 ARYYD--GRISNDHGR 29
Y+ G N + R
Sbjct: 827 NTGYNTYGSYGNQNQR 842
>SB_15566| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1265
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = -2
Query: 253 HGGHDGHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRS 89
H G D + + H+ R S H H+G VTN ++ DHRG RS
Sbjct: 816 HRGVDTNDRNSHYER------SDSHRDHRGVVTNDRYSYYGRSDYQRDHRGLRRS 864
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 28.7 bits (61), Expect = 3.1
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Frame = -2
Query: 259 PRHG--GHDGHVTDEHWARGHNGRVSH--DHGGHQGHVTNVHWARGHNGGVSHDHRGYTR 92
P HG +DG+ D H+ G +GR + D + G++ N A +N ++ + G
Sbjct: 313 PGHGLYSNDGNNDDAHF--GDSGRHDNFNDDISNDGNL-NGGGANNNNNKNNNYNSGINN 369
Query: 91 SLGNNYRARYYDGRISNDHGRNS 23
+ NNY + +GR +N+ N+
Sbjct: 370 NNNNNYNSGSSNGRNTNNGNNNN 392
>SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05)
Length = 1098
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/63 (28%), Positives = 24/63 (38%)
Frame = -2
Query: 289 LG*GPQWRGQPRHGGHDGHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHD 110
+G GP+ G+ GG G W RG + GG G + W R GG+
Sbjct: 245 MGQGPRGWGRGSGGGW-GQGPGGGWGRGQGRGMGRGPGGGWGRGSGGGWGRMQGGGMGRG 303
Query: 109 HRG 101
G
Sbjct: 304 PGG 306
>SB_53527| Best HMM Match : zf-C3HC4 (HMM E-Value=3.3e-12)
Length = 1290
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -2
Query: 247 GHDGHVTDEHWARGHNGRVSHDHG-GHQGHVTNVHWAR 137
GH G V H A+ R S H GH+G V +HWA+
Sbjct: 858 GHKGQVHPIHRAQ----RASSSHPTGHKGQVHPIHWAQ 891
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/69 (28%), Positives = 26/69 (37%), Gaps = 9/69 (13%)
Frame = -2
Query: 247 GHDGHVTDEHWARGHNGRVSHDHG---------GHQGHVTNVHWARGHNGGVSHDHRGYT 95
GH G V H R SH G GH+G V +HWA+ + H+G
Sbjct: 775 GHKGQVHPIH--RAQRASSSHPTGTKGKFIPSTGHKGQVHPIHWAQRASSFHPPGHKGQV 832
Query: 94 RSLGNNYRA 68
+ RA
Sbjct: 833 HPIHRAQRA 841
Score = 27.1 bits (57), Expect = 9.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 175 GHQGHVTNVHWARGH 131
GH+G V +HW +GH
Sbjct: 1128 GHKGQVHPIHWHKGH 1142
>SB_40869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 412
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = -2
Query: 214 ARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNY 74
A GH ++H H H A H G++H H T+ L ++Y
Sbjct: 214 AHGHTKGLAHSHTKGLAHSHTKGLAHSHTKGLAHSH---TKGLAHSY 257
>SB_31213| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 919
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = -2
Query: 187 HDHGGHQGHVTNVHWA-RGHNGGVSHDHRGYTRSLGNNYRARYYDGRISNDHGRNSR 20
H HGG + T+ H + H+ H HR + + + GR ++DH R
Sbjct: 417 HGHGGLEAIQTSKHQQDQHHHHHHHHHHRHHKHRSSSGHSTTEASGRRASDHSHEMR 473
>SB_15859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 970
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = -2
Query: 268 RGQPRHGG--HDGHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNG 125
+G+ R GG H+GH + H R GR G G + GH G
Sbjct: 907 KGKGREGGKDHEGHKGNGHGGRKGKGRKGRKDKGRMGRKGHQGPPLGHQG 956
>SB_51218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 363
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = -2
Query: 247 GHDGHVTDEHW---ARGHNGRVSHDHGGHQGHVTNVHWARGHNG 125
GHD T+ H GH+ ++DH GH +TN H NG
Sbjct: 142 GHDMTPTNGHDMTPTNGHDMTPTNDHDGHDMTLTNSHDITPTNG 185
Score = 27.1 bits (57), Expect = 9.5
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = -2
Query: 247 GHDGHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNY 74
GHD T+ H NG GH TN GH+ ++DH G+ +L N++
Sbjct: 126 GHDMTPTNGHDMTPTNGHDMTPTNGHDMTPTN-----GHDMTPTNDHDGHDMTLTNSH 178
>SB_13265| Best HMM Match : IncA (HMM E-Value=0.32)
Length = 339
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = -3
Query: 144 GLGATMAGSATITGATLGPSATITGLGTMMAGSAMITGETAGFSS 10
G+G +++G + G L A + G+G + AG+ ++ + GF+S
Sbjct: 202 GVGVSLSGIGVLIGGPLAGVAGLVGVGVVGAGAGVV---SRGFTS 243
>SB_37199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 461
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -2
Query: 202 NGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGY 98
+G SHD G H + + GH+G SHD G+
Sbjct: 5 DGVDSHDDDGDDSHDDDGDDSHGHDGVESHDGYGF 39
>SB_25884| Best HMM Match : Prothymosin (HMM E-Value=6.3)
Length = 175
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
Frame = -2
Query: 241 DGHV---TDEHWARGHNGRVSHDHG--GHQGHVTNVHWARGHNGGVSHD 110
DGH+ T EH GH SH+H GH T+ GH +H+
Sbjct: 24 DGHMKTCTHEHSEDGHMKTCSHEHSEDGHMKTCTHEPSENGHMKTCTHE 72
Score = 27.1 bits (57), Expect = 9.5
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 7/59 (11%)
Frame = -2
Query: 241 DGHV---TDEHWARGHNGRVSHDHGGHQGHVTNVHWAR--GHNGGVSHDHR--GYTRSL 86
DGH+ T EH GH +H+H T +H GH +H+H G+ R L
Sbjct: 115 DGHMKTCTHEHSEDGHTKTCTHEHSEDGYMKTCIHEQSEDGHMKTCTHEHSEDGHMRDL 173
>SB_25763| Best HMM Match : MgtE_N (HMM E-Value=1.9)
Length = 483
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/63 (20%), Positives = 24/63 (38%)
Frame = -2
Query: 271 WRGQPRHGGHDGHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRGYTR 92
W H+ T ++W+ +N ++ H T +W+ H G + R T
Sbjct: 400 WSTYDNWSTHNNWSTHDNWSNHNNWSAHNNWSAHNNWNTYHNWSTYHTGASTTTERATTP 459
Query: 91 SLG 83
+ G
Sbjct: 460 TPG 462
>SB_16487| Best HMM Match : ITAM (HMM E-Value=0.24)
Length = 815
Score = 27.9 bits (59), Expect = 5.4
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = -2
Query: 250 GGHDGHVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGVSHDHRG 101
GGH TD GH G + GGHQG T+ + G G+S+D G
Sbjct: 19 GGHQAISTDS--IGGHQGISTDSIGGHQGISTD---SIGGYQGISNDSIG 63
>SB_12271| Best HMM Match : DUF1079 (HMM E-Value=1.2)
Length = 1716
Score = 27.9 bits (59), Expect = 5.4
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Frame = -2
Query: 262 QPRH-GGHDGHVTDEHWARGHNGRVSHDHGGHQG----HVTNVHWARGHNGGVSHDHRGY 98
QPR+ G HD +++ G++G + + GH G H TN G N G +D
Sbjct: 376 QPRYTGNHDDQHSNQCRRPGNHGNLPSNQIGHTGNHGDHYTNRKSYPG-NQGDGNDRTKT 434
Query: 97 TRSLGNNYRARYYDGR 50
S + +R YD R
Sbjct: 435 KSSTQEDLLSRSYDKR 450
>SB_58969| Best HMM Match : Avidin (HMM E-Value=3.7)
Length = 706
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = -2
Query: 235 HVTDEHWARGHNGRVSHDHGGHQGHVTNVHWARGHNGGV--SHDHRGYTRSLGNNYRARY 62
HV D AR + V+ H HV++ R + V S R YT+ + + AR
Sbjct: 61 HVNDSQTARIYTQHVNDSRHEHLQHVSDSQTVRNYTQHVNGSRTARIYTKHVNASQTARI 120
Query: 61 YDGRIS 44
Y ++
Sbjct: 121 YTQHVN 126
>SB_13470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1483
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 211 RGHNGRVSHDHGGHQGHVTNVHWA 140
+G N + + GH HVTNV WA
Sbjct: 875 KGKNAKFKK-YPGHSAHVTNVRWA 897
>SB_9681| Best HMM Match : IncA (HMM E-Value=0.58)
Length = 215
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = -3
Query: 144 GLGATMAGSATITGATLGPSATITGLGTMMAGSAMIT 34
G+G +++G + G L A + G+G + AG+ +++
Sbjct: 78 GVGVSLSGIGVLIGGPLAGVAGLVGVGVVGAGAGVVS 114
>SB_19891| Best HMM Match : Keratin (HMM E-Value=0.96)
Length = 209
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = -3
Query: 144 GLGATMAGSATITGATLGPSATITGLGTMMAGSAMIT 34
G+G +++G + G L A + G+G + AG+ +++
Sbjct: 94 GVGVSLSGIGVLIGGPLAGVAGLVGVGVVGAGAGIVS 130
>SB_11794| Best HMM Match : TNFR_c6 (HMM E-Value=1.4e-05)
Length = 331
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 213 AQCSSVTCPSCPPWRG*PRHCG 278
A C CP+CP +G HCG
Sbjct: 117 ASCHCEPCPTCPIGKGVYPHCG 138
>SB_42267| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=5.9e-12)
Length = 902
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -2
Query: 517 NNNINDTCKSCKLYFHVKSTCRRCHLVIFLYFRND 413
++ +N T C FH + CR C + L+F N+
Sbjct: 705 SDELNATLPCCS--FHKEENCRLCRYMTVLFFLNE 737
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/53 (28%), Positives = 20/53 (37%)
Frame = -2
Query: 178 GGHQGHVTNVHWARGHNGGVSHDHRGYTRSLGNNYRARYYDGRISNDHGRNSR 20
GG+ G + +W R G + Y+R G Y Y G G N R
Sbjct: 775 GGYGGPPRDQNWGRDPREGWGGNRDNYSRGGGGGYNRGYGSGGGYGGGGYNKR 827
>SB_26478| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=7.6e-10)
Length = 142
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -2
Query: 157 TNVHWARGHNGGVSHDHRGYTRSLGNNY 74
T V WA H G ++H H G + G Y
Sbjct: 107 TQVGWALMHPGRLTHYHEGLPTTWGTRY 134
>SB_15720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1277
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/70 (28%), Positives = 25/70 (35%), Gaps = 3/70 (4%)
Frame = -2
Query: 256 RHGGHDGHVTDEHWARGHNGRVSHDHGG--HQGHVT-NVHWARGHNGGVSHDHRGYTRSL 86
RH G + T H R G +GH + + R H SH RG+TR
Sbjct: 567 RHTGRSSNTTRRHTRRSSKQLAVTQDGQVTTRGHTRRSSNTTRSHTRRSSHTTRGHTRRS 626
Query: 85 GNNYRARYYD 56
N R D
Sbjct: 627 SNTTRVTQGD 636
>SB_5724| Best HMM Match : Vicilin_N (HMM E-Value=3)
Length = 861
Score = 27.1 bits (57), Expect = 9.5
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = -2
Query: 214 ARGHNGRVSHDHGG---HQGHVTNVHWA-RGHNGGVSHDHRGYTRSLGNNYRARYYDG 53
+RG+ G + +GG H G T + H GG + + G+TR G+ R+Y G
Sbjct: 328 SRGNTGGFTRHYGGFTRHYGGFTRHYGVFTRHYGGFTRHYGGFTRHYGD--FTRHYGG 383
>SB_40325| Best HMM Match : Herpes_US9 (HMM E-Value=1.9)
Length = 227
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = -3
Query: 144 GLGATMAGSATITGATLGPSATITGLGTMMAGSAMIT 34
G+G +++G + G L A + G+G + AG+ +++
Sbjct: 67 GVGVSLSGIRVLIGGPLAGVAGLVGVGVVGAGAGVVS 103
>SB_26341| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 329
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -2
Query: 256 RHGGHDGHVTDEHWARGHNGRVSHDHGGHQ 167
+H + H+ EH GH G H HG H+
Sbjct: 266 KHIAYQHHLEPEHEEHGHGG---HGHGDHE 292
>SB_24257| Best HMM Match : DUF583 (HMM E-Value=0.16)
Length = 3999
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 3/63 (4%)
Frame = -2
Query: 214 ARGHNGRVSHDHGGHQGHVTNVH---WARGHNGGVSHDHRGYTRSLGNNYRARYYDGRIS 44
A GH ++ GH+ N H A GH ++ H T + N A ++ +
Sbjct: 19 ANGHENMTAN---GHENMTANSHENMTANGHENMTANGHENMTANGHENMTANGHENMTA 75
Query: 43 NDH 35
N H
Sbjct: 76 NSH 78
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,033,115
Number of Sequences: 59808
Number of extensions: 223790
Number of successful extensions: 903
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1184975377
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -