Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0135
         (748 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    25   0.49 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    24   1.1  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   2.0  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   2.6  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   2.6  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   3.4  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    23   3.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   6.0  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   6.0  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   6.0  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   6.0  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   6.0  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   7.9  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   7.9  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 438 LGYYDTLLDNSTLLDIW 388
           L YY T  D +T+LD W
Sbjct: 310 LAYYSTTCDIATILDFW 326


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 594 CAGLVRDGGRDYDNTDLGALPSSKM 668
           CA ++  GGR+  N +   LP  K+
Sbjct: 7   CALILTVGGRNLKNAEFNGLPEEKL 31


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -2

Query: 102 CSPIDTGLPRLLAVQLQTAASTATAKVRT 16
           C P    L R+L   LQT  +  T K RT
Sbjct: 53  CPPQGVDLKRVLPEALQTNCAKCTEKQRT 81


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +2

Query: 671 LVGIVSFGKSNSNDATRSTHSISL 742
           L G+VS    NS D+T S  SI L
Sbjct: 9   LSGVVSQINGNSGDSTSSATSIDL 32


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +2

Query: 671 LVGIVSFGKSNSNDATRSTHSISL 742
           L G+VS    NS D+T S  SI L
Sbjct: 9   LSGVVSQINGNSGDSTSSATSIDL 32


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 22/80 (27%), Positives = 30/80 (37%)
 Frame = +1

Query: 127 IPTHLESMVPTVRWYCSHQLPLPFNCYLFPWRILRSCIPSHYRGSSRRSEPGEISYVHFA 306
           +  HL S   T+ W+  HQ   P   Y+     +  C P H   + R       S  HF 
Sbjct: 122 VVNHLSSDSTTIHWHGHHQKNSP---YMDGVPFVTQC-PIHPGMTFRYHFNVHNSGTHFW 177

Query: 307 VNHPQFSEENYDKDVSIVRV 366
            +H  F   +      IVRV
Sbjct: 178 HSHSGFQRSDGTFGPFIVRV 197


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 552 QYKDHDRVVTDHKFCAGLVRD 614
           +YKD ++ +   K   GL+RD
Sbjct: 135 RYKDLNKALESSKISVGLIRD 155


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 104 PSLVQIEVFLPILNQW 151
           P +  IE ++P+L QW
Sbjct: 496 PLITLIETWMPLLPQW 511


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 491 ALPP*TVVPHPSRSTKI 441
           ALPP   +P P RS+ I
Sbjct: 70  ALPPKREIPSPKRSSPI 86


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/31 (29%), Positives = 13/31 (41%)
 Frame = +2

Query: 179 TNYHYLSTATCFHGEFYDPAYRRIIVDLPVV 271
           T  HY      + GE Y+P +  +    P V
Sbjct: 301 TQQHYQMNQNMYPGEMYNPEHTTVNEAQPYV 331


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/31 (29%), Positives = 13/31 (41%)
 Frame = +2

Query: 179 TNYHYLSTATCFHGEFYDPAYRRIIVDLPVV 271
           T  HY      + GE Y+P +  +    P V
Sbjct: 249 TQQHYQMNQNMYPGEMYNPEHTTVNEAQPYV 279


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/31 (29%), Positives = 13/31 (41%)
 Frame = +2

Query: 179 TNYHYLSTATCFHGEFYDPAYRRIIVDLPVV 271
           T  HY      + GE Y+P +  +    P V
Sbjct: 432 TQQHYQMNQNMYPGEMYNPEHTTVNEAQPYV 462


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -1

Query: 190 VVVGENNTSALLEPLIQDG*EYFNLDQAGVLANRHRSTEI 71
           +V+GE  TS  +  L++    +F+L QA    NR+   ++
Sbjct: 192 IVLGETWTSLSVYHLVEISEIHFDLCQAADDLNRYFEVQV 231


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -1

Query: 190 VVVGENNTSALLEPLIQDG*EYFNLDQAGVLANRHRSTEI 71
           +V+GE  TS  +  L++    +F+L QA    NR+   ++
Sbjct: 188 IVLGETWTSLSVYHLVEISEIHFDLCQAADDLNRYFEVQV 227


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,880
Number of Sequences: 336
Number of extensions: 5001
Number of successful extensions: 21
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)