Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0135
(748 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g18640.2 68414.m02324 3-phosphoserine phosphatase (PSP) nearl... 32 0.35
At1g18640.1 68414.m02323 3-phosphoserine phosphatase (PSP) nearl... 32 0.35
At5g56450.1 68418.m07046 mitochondrial substrate carrier family ... 31 0.61
At1g30450.3 68414.m03722 cation-chloride cotransporter, putative... 30 1.4
At1g30450.2 68414.m03721 cation-chloride cotransporter, putative... 30 1.4
At1g30450.1 68414.m03720 cation-chloride cotransporter, putative... 30 1.4
At2g15740.1 68415.m01802 zinc finger (C2H2 type) family protein ... 29 2.5
At5g05700.1 68418.m00627 arginine-tRNA-protein transferase 1 / a... 29 3.3
At3g05050.1 68416.m00548 protein kinase family protein contains ... 29 3.3
At1g53190.1 68414.m06028 zinc finger (C3HC4-type RING finger) fa... 29 4.3
At1g01150.1 68414.m00024 expressed protein ; expression supporte... 29 4.3
At4g11530.1 68417.m01850 protein kinase family protein contains ... 28 5.7
At4g04870.1 68417.m00709 CDP-alcohol phosphatidyltransferase fam... 28 5.7
At2g41470.1 68415.m05123 embryo-specific protein-related similar... 28 5.7
At3g19860.1 68416.m02515 basic helix-loop-helix (bHLH) family pr... 28 7.6
At1g11220.1 68414.m01285 expressed protein contains similarity t... 28 7.6
At4g33600.1 68417.m04773 expressed protein 27 10.0
>At1g18640.2 68414.m02324 3-phosphoserine phosphatase (PSP) nearly
identical to 3-phosphoserine phosphatase GI:3759177 from
[Arabidopsis thaliana]
Length = 295
Score = 32.3 bits (70), Expect = 0.35
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = -2
Query: 444 NTLGYYDTLLDNSTLLDIWAEVDGMCYSYDAHILV 340
+TLG+ ++ + +LD+W V+ +C+ D+ + V
Sbjct: 62 STLGHEGNIVPSKEILDLWRSVEAVCFDVDSTVCV 96
>At1g18640.1 68414.m02323 3-phosphoserine phosphatase (PSP) nearly
identical to 3-phosphoserine phosphatase GI:3759177 from
[Arabidopsis thaliana]
Length = 295
Score = 32.3 bits (70), Expect = 0.35
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = -2
Query: 444 NTLGYYDTLLDNSTLLDIWAEVDGMCYSYDAHILV 340
+TLG+ ++ + +LD+W V+ +C+ D+ + V
Sbjct: 62 STLGHEGNIVPSKEILDLWRSVEAVCFDVDSTVCV 96
>At5g56450.1 68418.m07046 mitochondrial substrate carrier family
protein contains Pfam profile: PF00153 mitochondrial
carrier protein
Length = 330
Score = 31.5 bits (68), Expect = 0.61
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = -2
Query: 699 LFPKDTMPTNAFWKKAGHPSQYYRSHGHHPGP---NRRRICDQSRRDHDPYTGSCSFLCW 529
+F +DT P A WK+ G S G P RRRI QS +H Y + CW
Sbjct: 228 IFSEDTKPELALWKRWGLAQAVTTSAGLASYPLDTVRRRIMMQSGMEHPMYRSTLD--CW 285
Query: 528 SQ*VRA 511
+ R+
Sbjct: 286 KKIYRS 291
>At1g30450.3 68414.m03722 cation-chloride cotransporter, putative
similar to cation-chloride co-transporter GB:AAC49874
GI:2582381 from [Nicotiana tabacum], Cation-Chloride
Cotransporter (CCC) Family Member, PMID:11500563
Length = 975
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 200 LKGSGSW*EQYQRTVGTIDSRWV 132
+KG W +YQR GTID W+
Sbjct: 767 IKGLDEWPNEYQRQYGTIDLYWI 789
>At1g30450.2 68414.m03721 cation-chloride cotransporter, putative
similar to cation-chloride co-transporter GB:AAC49874
GI:2582381 from [Nicotiana tabacum], Cation-Chloride
Cotransporter (CCC) Family Member, PMID:11500563
Length = 975
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 200 LKGSGSW*EQYQRTVGTIDSRWV 132
+KG W +YQR GTID W+
Sbjct: 767 IKGLDEWPNEYQRQYGTIDLYWI 789
>At1g30450.1 68414.m03720 cation-chloride cotransporter, putative
similar to cation-chloride co-transporter GB:AAC49874
GI:2582381 from [Nicotiana tabacum], Cation-Chloride
Cotransporter (CCC) Family Member, PMID:11500563
Length = 975
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 200 LKGSGSW*EQYQRTVGTIDSRWV 132
+KG W +YQR GTID W+
Sbjct: 767 IKGLDEWPNEYQRQYGTIDLYWI 789
>At2g15740.1 68415.m01802 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 329
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = -1
Query: 700 ALSKRHNAYQRILEEGRAPKSVL 632
+LS +HN QR+L++GR+ K +L
Sbjct: 181 SLSSKHNHDQRVLQDGRSMKKIL 203
>At5g05700.1 68418.m00627 arginine-tRNA-protein transferase 1 /
arginyltransferase 1 / arginyl-tRNA-protein transferase
1 (ATE1) identical to SP|Q9ZT48 Arginine-tRNA-protein
transferase 1 (EC 2.3.2.8) (R-transferase 1)
(Arginyltransferase 1) (Arginyl-tRNA--protein
transferase 1) {Arabidopsis thaliana}
Length = 632
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
Frame = +1
Query: 145 SMVPTVRWYCSHQLPLPFNCYLFPWRILRSCIPSHYRGSSRRSE---PGEISYVHFAVNH 315
S + + W +Q P Y + + SC Y+ + R SE P +V F V
Sbjct: 424 SAIQEINWVIENQARCPSLQYYYLGYYIHSCSKMRYKAAYRPSELLCPLRFQWVPFEVAR 483
Query: 316 PQFSEENY 339
P ++ Y
Sbjct: 484 PMLDKKPY 491
>At3g05050.1 68416.m00548 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 593
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = -2
Query: 717 VASLELLFPKDTMPTNAFWKKAGHPSQYYRSHGHHPGPNRRRICDQSRRDHDP 559
V L ++ P+ +WKK PS + +H H P P +R + +D P
Sbjct: 345 VEQLHRIYKLCGSPSEEYWKKIRLPSTHKHAH-HKPLPQYKRRIREVYKDFSP 396
>At1g53190.1 68414.m06028 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 finger protein RHG1a
GI:3822225 from [Arabidopsis thaliana]; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 494
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -2
Query: 678 PTNAFWKKAGHPSQYYRSHGHHPGP 604
PT+ + +P +Y SH HHP P
Sbjct: 240 PTSFMYPSQLNPRDHYYSHHHHPAP 264
>At1g01150.1 68414.m00024 expressed protein ; expression supported
by MPSS
Length = 345
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/61 (26%), Positives = 34/61 (55%)
Frame = -2
Query: 483 TLNGSSPSEQINKNTLGYYDTLLDNSTLLDIWAEVDGMCYSYDAHILVVILLRELGMVNG 304
T+N + P ++I + G + T ++S L D W ++ + + I ++I++ E+G NG
Sbjct: 255 TINKNMPWKKILEMGKGIFHTTRNSSDLKDKWRNMNYLDL-VEVEIDIIIVVAEIGDQNG 313
Query: 303 K 301
+
Sbjct: 314 E 314
>At4g11530.1 68417.m01850 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 931
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
Frame = +2
Query: 137 ILNQWFQQCAGIVLTNYHYLSTATCFHGEF-----YDPAYRRIIVDL 262
+LN F L + Y+ST TCF+G F YD RRI+ L
Sbjct: 2 MLNTLFLPIFLFFLITFDYVSTQTCFNGYFKPNGTYDLNRRRILSSL 48
>At4g04870.1 68417.m00709 CDP-alcohol phosphatidyltransferase family
protein similar to SP|Q07560 Cardiolipin synthetase (EC
2.7.8.-) {Saccharomyces cerevisiae; contains Pfam
profile PF01066: CDP-alcohol phosphatidyltransferase
Length = 341
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 130 PTHLESMVPTVRWYCSHQLPLPFNCYLFPWRILRSCIPSHYRGS 261
P + P +W+ PL + PW++L+S P H+RG+
Sbjct: 44 PHFSHRLSPLSKWFVPLNGPLFLSSP--PWKLLQSATPLHWRGN 85
>At2g41470.1 68415.m05123 embryo-specific protein-related similar to
embryo-specific protein 3 (ATS3) [Arabidopsis thaliana]
GI:3335171
Length = 365
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1
Query: 730 VSTTGSVIGIALSKRHNAYQR 668
+STT SV I L + HN+YQR
Sbjct: 170 ISTTSSVAAINLRRFHNSYQR 190
>At3g19860.1 68416.m02515 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 284
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -3
Query: 491 ALPP*TVVPHPSRSTKIPWGITTPCWIIAPCWIFGP 384
A+PP ++ HPS + +G P I APC + P
Sbjct: 134 AMPPGSIPMHPSMPSYTYFGNQNPSMIPAPCPTYMP 169
>At1g11220.1 68414.m01285 expressed protein contains similarity to
cotton fiber expressed protein 1 [Gossypium hirsutum]
gi|3264828|gb|AAC33276
Length = 310
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +1
Query: 565 MIAS*LITNSAPVWSGMVAVTTIILTWVPCLLPKCVGRHCVFW 693
M++S + +A + +G+VAV+ + + VP + V R +FW
Sbjct: 1 MVSSMISIKAALITAGIVAVSLFLKSSVPIAVDFSVSRFPIFW 43
>At4g33600.1 68417.m04773 expressed protein
Length = 453
Score = 27.5 bits (58), Expect = 10.0
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +1
Query: 139 LESMVPTVRWYCSHQLPLPFNCYLFPWRILR 231
L +MVP V W HQ P L+ W LR
Sbjct: 183 LSAMVPFVAWSLRHQCENPQRWVLYHWGELR 213
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,819,609
Number of Sequences: 28952
Number of extensions: 417717
Number of successful extensions: 1060
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1653386488
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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