Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0134
         (634 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g38250.1 68418.m04611 serine/threonine protein kinase, putati...    31   0.64 
At2g15090.1 68415.m01720 fatty acid elongase, putative similar  ...    30   1.5  
At4g26420.1 68417.m03802 S-adenosyl-L-methionine:carboxyl methyl...    29   2.6  
At5g38210.1 68418.m04606 serine/threonine protein kinase family ...    29   3.4  
At3g28390.1 68416.m03547 P-glycoprotein, putative similar to P-g...    29   3.4  
At5g44640.1 68418.m05470 glycosyl hydrolase family 1 protein con...    28   5.9  
At5g42260.1 68418.m05144 glycosyl hydrolase family 1 protein con...    28   5.9  
At5g36890.1 68418.m04419 glycosyl hydrolase family 1 protein pco...    28   5.9  
At2g44450.1 68415.m05527 glycosyl hydrolase family 1 protein con...    28   5.9  
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex...    27   7.8  

>At5g38250.1 68418.m04611 serine/threonine protein kinase, putative
           similar to receptor serine/threonine kinase PR55K
           gi|1235680|gb|AAC49208; contains protein kinase domain,
           Pfam:PF00069; contains serine/threonine protein kinase
           domain, INTERPRO:IPR002290
          Length = 579

 Score = 31.1 bits (67), Expect = 0.64
 Identities = 21/70 (30%), Positives = 33/70 (47%)
 Frame = +1

Query: 190 QPGRNMPKIFHVNWFRKDEQGNSSGPVSDENSRVLDWILRRCXXEPCHAETPLGYIPRAG 369
           QP RN+  +F++   R+   GN + PV    S V +   R+   +      P  Y+P   
Sbjct: 128 QPYRNLT-VFYMCDPRRHFFGNFTCPVKGLGSVVQNSTYRKLCDKSFSVTVPTSYVPEEE 186

Query: 370 ALNTENLSAV 399
           ALN  +L +V
Sbjct: 187 ALNLTHLESV 196


>At2g15090.1 68415.m01720 fatty acid elongase, putative similar  to
           fatty acid elongase 1 [GI:881615]
          Length = 481

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = -1

Query: 586 KTIVTSNLSHEVGVSTVSNCFPTQQHKTASRRTTEE 479
           K +  S L  E  +     CFP QQ   ASR+ TEE
Sbjct: 118 KILERSGLGQETYIPEGLQCFPLQQGMGASRKETEE 153


>At4g26420.1 68417.m03802 S-adenosyl-L-methionine:carboxyl
           methyltransferase family protein similar to caffeine
           synthase [Camellia sinensis][GI:9967143],
           defense-related protein cjs1 [Brassica
           carinata][GI:14009292],
           S-adenosyl-L-methionine:salicylic acid carboxyl
           methyltransferase [Clarkia breweri][GI:6002712]
          Length = 619

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +3

Query: 78  QGRRRTQR*NGDARSVCXASVLRLQLRRLPEALAVDAAAWTK 203
           QG RR+    GD R+   +S + L+ +RLP  +A ++  W K
Sbjct: 495 QGGRRSHC--GDQRTSKRSSQMSLETKRLPRTVAGESVVWCK 534


>At5g38210.1 68418.m04606 serine/threonine protein kinase family
           protein contains protein kinase domain, Pfam:PF00069;
           contains serine/threonine protein kinase domain,
           INTERPRO:IPR002290
          Length = 686

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +1

Query: 343 PLGYIPRAGALNTENLSAV 399
           P+GY P  GALN  NL +V
Sbjct: 179 PIGYAPEEGALNVTNLESV 197


>At3g28390.1 68416.m03547 P-glycoprotein, putative similar to
           P-glycoprotein homologue GI:2292907 from [Hordeum
           vulgare subsp. vulgare]
          Length = 1225

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +1

Query: 148 YNFGDYLKHWLSMPQPGRNMPKI--FHVNWFRKDEQGNSSGPV 270
           Y F  Y+  +L+     R + KI  F VNWF KDE  NSSG +
Sbjct: 720 YGFA-YMGEYLTKRIRERMLGKILTFEVNWFDKDE--NSSGAI 759


>At5g44640.1 68418.m05470 glycosyl hydrolase family 1 protein
           contains Pfam PF00232 : Glycosyl hydrolase family 1
           domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
           similar to Non-cyanogenic beta-glucosidase precursor
           (SP:P26204) [Trifolium repens]
          Length = 507

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +1

Query: 151 NFGDYLKHWLSMPQP 195
           NFGD +KHW+++ +P
Sbjct: 187 NFGDRVKHWMTLNEP 201


>At5g42260.1 68418.m05144 glycosyl hydrolase family 1 protein
           contains Pfam PF00232 : Glycosyl hydrolase family 1
           domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
           similar to amygdalin hydrolase isoform AH I precursor
           (GI:16757966)  [Prunus serotina]
          Length = 507

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +1

Query: 151 NFGDYLKHWLSMPQP 195
           NFGD +KHW+++ +P
Sbjct: 187 NFGDRVKHWMTLNEP 201


>At5g36890.1 68418.m04419 glycosyl hydrolase family 1 protein
           pcontains Pfam PF00232 : Glycosyl hydrolase family 1
           domain; similar to amygdalin hydrolase isoform AH I
           precursor (GI:16757966) [Prunus serotina]; prunasin
           hydrolase isoform PHA precursor, Prunus serotina,
           EMBL:AF221526
          Length = 490

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +1

Query: 151 NFGDYLKHWLSMPQP 195
           NFGD +KHW+++ +P
Sbjct: 170 NFGDRVKHWITLNEP 184


>At2g44450.1 68415.m05527 glycosyl hydrolase family 1 protein
           contains Pfam PF00232 : Glycosyl hydrolase family 1
           domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
           similar to amygdalin hydrolase isoform AH I precursor
           (GI:16757966) [Prunus serotina]
          Length = 506

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +1

Query: 151 NFGDYLKHWLSMPQP 195
           NFGD +KHW+++ +P
Sbjct: 187 NFGDRVKHWMTLNEP 201


>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
           extensin family protein similar to extensin-like protein
           [Lycopersicon esculentum] gi|5917664|gb|AAD55979;
           contains leucine-rich repeats, Pfam:PF00560; contains
           proline rich extensin domains, INTERPRO:IPR002965
          Length = 956

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = -1

Query: 382 PYSEHRLSVCTPVESRRGRAPRXSDARSSLRPESSRPKP 266
           P SE  +    P       AP+ S+A  S  P SS P P
Sbjct: 881 PDSEPEVEAPVPSSEPEVEAPKQSEATPSSSPPSSNPSP 919


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,266,015
Number of Sequences: 28952
Number of extensions: 272415
Number of successful extensions: 757
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 757
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1295224128
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)